Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00941 ATGGAGACCGAGGAGTACAGAGAGGAAAACCTGGTTGTCAGGGAGTTTCACGCAAATGGAGTTTCCATTAAAACAACAGAAGTTGAGGCAAAGCTAGATGAGGGAAATATTCAAGAGGCAGAATCTTCCTTGCGGGAAGGATTATCATTGAATTTTGAGGAAGCAAGAGCTCTTCTTGGAAAGTTGGAGTATCAAAGAGGTAATGTGGAAGGTGCTCTTCGTGTGTTCGATGGCATTGATCTCCAAGCAGCAATTCAGAGATTGCAGCCTTCTCTTACTGAAAAAATGCCATCCAAAAAGGGCCGTCCTCGCACAGATTCGCAGCATGGAGTCTCTCAGCATGCTGCTAACCTGGTACTTGAAGCCATATATTTAAAAGCAAAGTCTCTTCAAAAGCTTGGGAAATTAACCGAGGCTGCTCATGAGTGTAAAAATGTGCTTGATGCTGTGGAGAAGATATTCTATCTGGGCATTCCCGATGTGCAAGTTGACAATAGATTGCAAGAGACAATAAGTCAAGCTGTTGAGCTTCTTCCAGAGCTTTGGAAACAAGGGGGTTGCTACCAGGAAGCAGTTTCTGCCTATCGACGAGCACTCTTGAGCCAATGGAACCTCGATAATGATTGCTCTGCAAGGATTCAGAAAGGATTTGCTGTCTTTCTGCTTTATGGAGGGGTAGAAGCTAGCCCTCCTAGTTTAGCAGTTCAGGTTGAAGGCTCATATATACCCAAAAACAATATGGAAGAGGCAATTCTACTTCTGATGATTCTTATGAGGAAATTTTTCCTTGGTAAGATCAACTGGGATCCATCTGTAATGGAGCATCTAACATTTGCACTATCTTTATGCAGCCAAACTTCTGTTTTAGCTAAACAATTTGAAGAAATCATGCCTGGAGTATATCCTCGTGTGGATATTTGGAAGTCTTTAGCTCTGTGTTACAATGGAGCAGGACAAAATAAATCTTCCTTAAACCTGTTGAGAAAGTCCTTGCACAAACATGAAAAACCAGAGGATTTGCTGGCATTGTTAGTGGCTGCAAAGATCTGCAGTGAAGATTCTTACCTTGCTGCTGAAGGAGTTGGCTATGCCCGACGGGCAGTCAGTAATGCAGTAGGCAAAGAAGAGCATTTGAAGAGTGTGGGCCTTCGAATGTTGGGTCTTTGTTTGGGAAAGCAAGCTAAGCTATGCTCCTCTGATTTTGAGAGGTCCCGCCTTCAGTCGGAGGCTTTGAAATCTCTAGATCAGGCAGCTTCTCTGGAGCGAAATAATTCTGATTTAAGTTTTGAATTGGGAGTTCAATATGCAGAACACAGGAATTTGACTGCGGCTTTGCATTATGCGAAGAAATATATTGATAAAACCGGTGGTTCTGTCTTAAAAGGCTGGAAATTGCTTGCTCTTGTGCTGTCTTCTCAAAAAAGATTTGCAGAGGCTGAAGTAGTCACTGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAAGGACCACTTTTCATGCTTAAAGCCAAGCTGAAGATATCTCAGTCACTACACATGGACGCTATTGAAACTTATCGATACCTCCTAGCATTAGTTCAAGCTCAAAGAAAATCGTTTGGACCACTTCAACTTCTGAATCGGGTTGAAGATGACAAGGTCAACGAATTTGAAATATGGCAAGGCTTGGCCAACTTATACGCCAGCCTTTCACATTGCAAAGATGCAGAGATATGTTTGGGAAAAGCTAGAGAGCTAAAACAATACTCGGCCGAAACGCTTCATACACAAGGCAATACTACTTTTTGTGGTGCAATTCGTGTAGGTGTGATATGTGAAGGAAGTGGACAAATTCCAGAAGCACTTGCTGCTTACATTAATGCTCTACTATTTGAGCCTGATTATGTACCTTGCAAGATATTGATCAGTGCCCTTTTGACCAAAACCGGTTCAAAGTCGTTGCCAATTGTAAAATGCTTACTTTCCGACGCATTGAGGATCGATCCAACCAATAAGAAGGCTTGGTATTACTTGGGAATGATTCATAAGGACGACGGGAGAACAGCCGATGCAATCGATTGTTTTCAGGCAGCTTCTATGCTTGAAGAATCCGATCCAATCCAAAGTTTTGCCTCTATTCTCTGA 2124 42.56 METEEYREENLVVREFHANGVSIKTTEVEAKLDEGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSLTEKMPSKKGRPRTDSQHGVSQHAANLVLEAIYLKAKSLQKLGKLTEAAHECKNVLDAVEKIFYLGIPDVQVDNRLQETISQAVELLPELWKQGGCYQEAVSAYRRALLSQWNLDNDCSARIQKGFAVFLLYGGVEASPPSLAVQVEGSYIPKNNMEEAILLLMILMRKFFLGKINWDPSVMEHLTFALSLCSQTSVLAKQFEEIMPGVYPRVDIWKSLALCYNGAGQNKSSLNLLRKSLHKHEKPEDLLALLVAAKICSEDSYLAAEGVGYARRAVSNAVGKEEHLKSVGLRMLGLCLGKQAKLCSSDFERSRLQSEALKSLDQAASLERNNSDLSFELGVQYAEHRNLTAALHYAKKYIDKTGGSVLKGWKLLALVLSSQKRFAEAEVVTDAALDETAKWEQGPLFMLKAKLKISQSLHMDAIETYRYLLALVQAQRKSFGPLQLLNRVEDDKVNEFEIWQGLANLYASLSHCKDAEICLGKARELKQYSAETLHTQGNTTFCGAIRVGVICEGSGQIPEALAAYINALLFEPDYVPCKILISALLTKTGSKSLPIVKCLLSDALRIDPTNKKAWYYLGMIHKDDGRTADAIDCFQAASMLEESDPIQSFASIL 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11834045 11838816 - Bpe023064.5 Bpe08g00941 107817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00941 707 PANTHER PROTEIN NPG1 4 706 IPR043376 -
Bpe08g00941 707 SMART tpr_5 120 153 IPR019734 GO:0005515
Bpe08g00941 707 SMART tpr_5 665 698 IPR019734 GO:0005515
Bpe08g00941 707 SMART tpr_5 460 493 IPR019734 GO:0005515
Bpe08g00941 707 SMART tpr_5 550 583 IPR019734 GO:0005515
Bpe08g00941 707 SMART tpr_5 595 628 IPR019734 GO:0005515
Bpe08g00941 707 SMART tpr_5 304 337 IPR019734 GO:0005515
Bpe08g00941 707 Coils Coil 403 423 - -
Bpe08g00941 707 ProSiteProfiles TPR repeat profile. 665 698 IPR019734 GO:0005515
Bpe08g00941 707 MobiDBLite consensus disorder prediction 92 111 - -
Bpe08g00941 707 Gene3D Tetratricopeptide repeat domain 273 646 IPR011990 GO:0005515
Bpe08g00941 707 SUPERFAMILY TPR-like 408 691 IPR011990 GO:0005515
Bpe08g00941 707 SUPERFAMILY TPR-like 120 446 IPR011990 GO:0005515
Bpe08g00941 707 Gene3D Tetratricopeptide repeat domain 18 203 IPR011990 GO:0005515
Bpe08g00941 707 PANTHER CALMODULIN-BINDING PROTEIN 4 706 - -
Bpe08g00941 707 Gene3D Tetratricopeptide repeat domain 652 704 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00921 Bpe-Chr3:28917003 Bpe08g00941 Bpe-Chr8:11834045 0 dispersed
Bpe08g00941 Bpe-Chr8:11834045 Bpe13g00544 Bpe-Chr13:12723507 0 dispersed
Bpe11g00402 Bpe-Chr11:3073455 Bpe08g00941 Bpe-Chr8:11834045 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00941 K21843 - csv:101206641 1093.57