Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00963 ATGGCTGGTCAATCTGATCCTCATCTCTCGTTATTTTCACCTGAGGAGGTAGAGTTTGTGGCTGAAGATGAGATCGTTGAAATTGTTCCTAAAATGAGAGTGGATGGTCTCAATTTGATCTGCGGTGATTATGGTCCATTCTTCCCTCAACTAGTGGCTCAAGTACCGTTGTGGCTAGCAATTGCTATGAAAAAGAGAGGGAAATGTGCTATCCGGTCTCCAGAATGGATGTCTATCGAAAAGTTGACTCAGATTTTAGAAGTAGAACGAGAATCTCAAGTAGCATTTCAGATACTACCATTTCATTACGGGAAAATCTCAAAGCTTCTTTTTGACAATGCACATAACCACATACAAGACATATACATGGTGAGATCTCTTGTCGAAGATATTAAAGATGTTAGGTTTCACAAGGTTGAAACTAGCTTAGAGGCAATTGATACACGAACATCTGCAGTAAAGATTAAAAATACGTCTGCCATGGAAGTAAATATTATTCGCACATTTGTTATCAGATCACTACAAGGAATCTATAATCATGGTAGCCCAGAGTTGGTTCCAAACCAGGAGAGAGTGTCAGGCAGAGTACAACAAGAGTATGATCCTCGTCAAAGAGTAAGTTATTTTCTAATTTCTTATGATTACGGATTTTAA 654 38.53 MAGQSDPHLSLFSPEEVEFVAEDEIVEIVPKMRVDGLNLICGDYGPFFPQLVAQVPLWLAIAMKKRGKCAIRSPEWMSIEKLTQILEVERESQVAFQILPFHYGKISKLLFDNAHNHIQDIYMVRSLVEDIKDVRFHKVETSLEAIDTRTSAVKIKNTSAMEVNIIRTFVIRSLQGIYNHGSPELVPNQERVSGRVQQEYDPRQRVSYFLISYDYGF 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12023613 12025401 + Bpe023085.1 Bpe08g00963 107839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00963 217 CDD GINS_A_psf2 66 182 - -
Bpe08g00963 217 Gene3D - 78 191 - -
Bpe08g00963 217 Gene3D - 12 77 - -
Bpe08g00963 217 PIRSF GINS_PSF2 2 208 IPR007257 GO:0005634|GO:0006260
Bpe08g00963 217 SUPERFAMILY GINS helical bundle-like 74 181 IPR036224 -
Bpe08g00963 217 SUPERFAMILY PriA/YqbF domain 12 71 - -
Bpe08g00963 217 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 193 IPR007257 GO:0005634|GO:0006260
Bpe08g00963 217 Pfam GINS complex protein 54 162 IPR021151 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00429 Bpe-Chr5:18693974 Bpe08g00963 Bpe-Chr8:12023613 3.02E-138 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00963 K10733 - csv:101212053 317.39