Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00994 ATGCCTGGGAACAAGTACAACGGTAATTTAAATTACATTCAAGACCGTATTCCTGGTCGAGTAGAAAGGCTACTGAGAGAAAGAGAGCTAAGAAAAAGCATCAGAGCTTCACATTCCAACGAGACAAATGACAGTACTAGAGAAGCTGACTTAATTGAACGTAACCTGCGCTTGAGAGAAGAAGATAACTCTGGCATTTTGTGTGTTGAAAAATTCTTGGAGTCTTCAGCACCTAATCGAGCTTTTACTGAGGGATGTGAACGTCAAGATGGGAAGGCTCTTAGACAAAGACTGCTGGTTGTGGCTAACAGGCTGCCAGTTTCTGCAGTTAGGAGAGGAGAAGACTCCTGGTCTCTGGAAATAAGCGCTGGGGGTCTAGTCAGTGCACTTCTCGGTGTGAAGGAGTTTGAGGCAAGATGGATTGGTTGGGCTGGAGTGAATGTGCCTGATGTGATTGGGCAGAAGGCACTCACAAGAGCTTTAGCTGAAAAGAGCTGTATTCCCGTTTTTCTGGATGAAGAAATTGTAGATCAATATTACAATGGCTACTGCAACAATATCTTGTGGCCTCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTAGCCACCACCCGCAGTTTTCAGTCTCAGTTTGCAGCATATAAAAAGGCAAATAAAATGTTTGCTGATGTGGTTAATATGCACTACAAAGAGGGCGATGTTGTTTGGTGCCATGATTACCATCTTATGTACCTCCCAAAATGTCTAAAGGAACATAACAGCAAAATGAAAGTCGGATGGTTTCTTCACACTCCATTTCCTTCTTCTGAAATTCACAGGACGCTACCTTCTCGATCTGAGCTGCTGCTTTCTGTACTAGCAGCCGATTTAGTAGGTTTTCATACTTATGACTATGCTCGTCATTTTGTGAGTGCTTGTACACGTATTCTGGGACTTGAGGGTACGCCAGAAGGCGTTGAAGATCAAGGGAAGCTAACTCGAGTAGCTGCGTTTCCTATTGGAATAGACTCTGATCGTTTCACTCGTGCACTTGAGGTTCCCCAAGTTCAAGAACATATAAAAGAGTTAAAGGAAAGGTTTAAAGGACGAAAGGTAATGTTAGGTGTTGATCGACTTGATATGATTAAAGGAATTCCTCAAAAGATATTGGCATTTGAAAAATTTTTGGAAGAAAATCCTACTTGGCGTGATAAAGTTGTTTTGTTGCAAATTGCCGTGCCAACAAGAACAGACGTTCCAGAGTATCAAAAATTAACAAGTCAGGTTCATGAAATTGTTGGACTTATAAATGGACGATTCGGTACATTGACAACTGTTCCTCTTCATCATCTGGATCGTTCACTTGACTTTCATGCCTTATGTGCTCTATATGCCGTTACTGATGTAGCATTAGTCACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAGTTTGTGGCTTGCCAAGATGCAAAGAAAGGGGTGCTCATTCTAAGCGAGTTTGCTGGCGCTGCACAGTCCTTGGGAGCTGGAGCTCTTCTAGTTAACCCTTGGAACATAACTGAAGTTGCAAAATCAATTGACCGAGCTTTGAATATGACTGCTGAGGAGAGAGAGAAACGTCATAGACATAATTTTCATCATGTGACAACACACACTGCTCAGGAGTGGGCCGAAACTTTTGTAAGTGAACTGAATGATACAGTTGTTGAAGCTGAACTGAGGATAAGACAAGCACCACCCCCGCTTCCTTTTGAGGATGCTATAAAACATTATTTGAGGTCAAATAATCGATTACTTATATTGGGATTTAATTCTACACTAACAGAACCAGTGGACACACCTGAGAGAAGAGGTGATCAAATTAGAGAAATGGAACTGAAATTGCACCCAGACTTGAAAGAGTCATTGACCACTCTCTGCCAGAATACAAGAACTACCATTGTTATCCTTAGTGGGAGTGACAGAGCAGTCTTAGATGAGAACTTTGGGAACTATAACATGTGGTTGGCTGCTGAAAATGGTATGTTTCTACGTTTTACCAAGGGAGATTGGATGACTACGATGCCGGAACATCTGAATATGGAATGGGTCGACAGTGTTAAGCATGTTTTCGAGTATTTCACGGAAAGAACACCTCGTTCACATTTTGAACCACGGGAAACTTCACTTGTGTGGAATTATAAATATGCGGGTAATGAGAACCATATTTCCACTGGTGTTTGGAGTTTTATGCTTTCTATGATTTGTGCTGATTATATGATTCTTGTAGATGTTGAATTTGGGAGACTTCAAGCGAGAGATATGCTGCAGCATCTCTGTACAGGCCCAATTTCTAATGCATCTGTCGATGTTGTTCAAGGTAGTCGCTCTGTCGAGGTGCGAGCAGTTGGTGTTACAAAGGGTGCAGCAATCGACCGAATACTAGGAGAGATTGTTCACAGTAAGTCGATGACAACCCCAATAGATTATGTCCTGTGCATAGGGCATTTTCTTGGCAAGGACGAGGATGTGTACACTTTCTTTGAGCCTGAGCTTCCTTCTGATACCATAGGTCTAGGAAGAACCAAGGCAATGGATGGACTTAAATTGTCTAGTGAGAGAAGATCTGCTTTGAAGCTCCCACCCAACAGAAATGGCTCAAAATCATCTCACACTTGCAAGGCCAGGCATTTGCCAAATTCAGAGAGAACTCTGGCCAACCACCTCTGTGGAAACGGAAAAAAGCAGTCCCCCGAGAAGATTCAGTGGAACGTGCTTGATCTCAAAGCCGAGAATTACTTCTCTTGTGCCATTGGCCGGACCCGCACCAGTGCTCGATATCTACTCGGATCGTCTGACGATGTCGTATCGTTTCTTAAGGAGCTTTCTTATGCAGTAGCATTATCCCATTTTTGA 2886 42.62 MPGNKYNGNLNYIQDRIPGRVERLLRERELRKSIRASHSNETNDSTREADLIERNLRLREEDNSGILCVEKFLESSAPNRAFTEGCERQDGKALRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDVIGQKALTRALAEKSCIPVFLDEEIVDQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANKMFADVVNMHYKEGDVVWCHDYHLMYLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLLSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFTRALEVPQVQEHIKELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPTWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGLINGRFGTLTTVPLHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMTAEEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAELRIRQAPPPLPFEDAIKHYLRSNNRLLILGFNSTLTEPVDTPERRGDQIREMELKLHPDLKESLTTLCQNTRTTIVILSGSDRAVLDENFGNYNMWLAAENGMFLRFTKGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFEPRETSLVWNYKYAGNENHISTGVWSFMLSMICADYMILVDVEFGRLQARDMLQHLCTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDTIGLGRTKAMDGLKLSSERRSALKLPPNRNGSKSSHTCKARHLPNSERTLANHLCGNGKKQSPEKIQWNVLDLKAENYFSCAIGRTRTSARYLLGSSDDVVSFLKELSYAVALSHF 961
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12279186 12288745 + Bpe023119.1 Bpe08g00994 107870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00994 961 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 97 562 IPR012766 GO:0003825|GO:0005992
Bpe08g00994 961 Gene3D Glycogen Phosphorylase B; 89 343 - -
Bpe08g00994 961 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 96 565 - -
Bpe08g00994 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 32 730 - -
Bpe08g00994 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 32 730 IPR001830 GO:0003824|GO:0005992
Bpe08g00994 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 753 953 IPR001830 GO:0003824|GO:0005992
Bpe08g00994 961 Pfam Trehalose-phosphatase 620 730 IPR003337 GO:0003824|GO:0005992
Bpe08g00994 961 Pfam Trehalose-phosphatase 753 842 IPR003337 GO:0003824|GO:0005992
Bpe08g00994 961 Pfam Glycosyltransferase family 20 97 562 IPR001830 GO:0003824|GO:0005992
Bpe08g00994 961 Gene3D - 621 807 IPR023214 -
Bpe08g00994 961 SUPERFAMILY HAD-like 594 952 IPR036412 -
Bpe08g00994 961 CDD GT20_TPS 97 562 IPR001830 GO:0003824|GO:0005992
Bpe08g00994 961 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 753 953 - -
Bpe08g00994 961 Gene3D Glycogen Phosphorylase B; 344 546 - -
Bpe08g00994 961 Gene3D - 687 793 - -
Bpe08g00994 961 CDD HAD_TPP 595 854 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00994 Bpe-Chr8:12279186 Bpe07g00231 Bpe-Chr7:1639176 2.88E-135 dispersed
Bpe02g01053 Bpe-Chr2:12087895 Bpe08g00994 Bpe-Chr8:12279186 1.39E-106 transposed
Bpe11g00444 Bpe-Chr11:3381189 Bpe08g00994 Bpe-Chr8:12279186 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00994 K16055 - csv:101204478 1609.35