Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01005 ATGGAGTTTCAGAGGTCTCTCTCTCTCTTCTTCCTGGTTGTCTCTTCGATTTTTCTTTCTTCCTGTGAAGCTTACAAATTCTACGTTGGTGGGAATAATGGGTGGATCCTCAATCCTTCCGAGAATTATAATCTGTGGGCTGAAAGAAACAGGTTCCAAATCAACGACACTCTCTTTTTTAAGTATGAACGAGGATCGGATTCTGTTCTGGTGGTGAGTAAGAAGGATTATGAGAATTGCTATACGAAGAATCCGATCATGAAACTTGATGATGGAGATTCTGAGTTTAAGTTAGACAGGTCTGGGCCGTTTTACTTCATAAGTGGAAAAGATGGAAACTGTGAAAGAGGTCAGAAATTGATCGTCGTTGTTTTAGCTTTGAGGAGTCCTCCGCCGCCGCCTTCTCCTGCTACACCGGCATCGTCTCCATTTCCTGCAGCTCCAGAGCCTTCAATGGCGGCTCCACCCAGTACTCCTCCGAGCTCGCCGTTTCCAGGTCCTCAAGCACCGTCTTCTGGTTCACCCTTGTCTCCATCTCCAACGTCTTCATCTCAATCGCCATCGTCAACGACTGGGCCGAGTTCGTCTCCATCGGAGTCTACACTATCTCCGCCACCATCTGGGTCGTCGACGTTGACTGTAATTCCCTCTGCAACATTGGTGTTAACCGCTGTGACAGTCATGGTTTGGACGTCCTCTAATGCTCTATAG 711 47.54 MEFQRSLSLFFLVVSSIFLSSCEAYKFYVGGNNGWILNPSENYNLWAERNRFQINDTLFFKYERGSDSVLVVSKKDYENCYTKNPIMKLDDGDSEFKLDRSGPFYFISGKDGNCERGQKLIVVVLALRSPPPPPSPATPASSPFPAAPEPSMAAPPSTPPSSPFPGPQAPSSGSPLSPSPTSSSQSPSSTTGPSSSPSESTLSPPPSGSSTLTVIPSATLVLTAVTVMVWTSSNAL 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12384876 12385666 - Bpe023130.1 Bpe08g01005 107881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01005 236 MobiDBLite consensus disorder prediction 175 211 - -
Bpe08g01005 236 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Bpe08g01005 236 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 147 - -
Bpe08g01005 236 CDD OsENODL1_like 25 125 IPR041846 -
Bpe08g01005 236 Gene3D - 23 128 IPR008972 -
Bpe08g01005 236 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
Bpe08g01005 236 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055
Bpe08g01005 236 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Bpe08g01005 236 MobiDBLite consensus disorder prediction 131 174 - -
Bpe08g01005 236 MobiDBLite consensus disorder prediction 131 211 - -
Bpe08g01005 236 PANTHER BLUE COPPER PROTEIN 1 147 IPR039391 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00545 Bpe-Chr7:11792725 Bpe08g01005 Bpe-Chr8:12384876 2.51E-49 dispersed
Bpe08g01005 Bpe-Chr8:12384876 Bpe14g00646 Bpe-Chr14:5254353 2.52E-48 dispersed
Bpe02g01264 Bpe-Chr2:16085611 Bpe08g01005 Bpe-Chr8:12384876 4.45E-30 transposed
Bpe11g00459 Bpe-Chr11:3570473 Bpe08g01005 Bpe-Chr8:12384876 1.90E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01005 - - mnt:21392925 188.734