Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01007 ATGGTGAAGACCATAACTCATGGATTTCACTTGGTCAAGGGAAAGTCTCATCGTGCAATGGAAGATTATGTCTTTGCAGAGTTTAAGCAAGTTGGTGACAAAGAACTGGGTTTGTTTGCAATTTTCGATGGCCATTCGAGTCAAAATATTCCCAACTATTTACAGTGCCATTTGTTTGAGAACATTCTAAATGAGCCTGATTTTTGGAACGAACCGGCAAATGCGGTCAGGAAAGCGTATCATATGACAGATATGATCATTTTGGACAAGGCAGTGGACATGGGCAGGGGAGGATCGACGGCTGTTACGGCTATTTTGATTAATGGTCAGAAGCTGGTCGTAGGCAATATCGGAGATTCTCGTGCAATTATCTGTACAAATGGTGTGGCCGTGCAGTTATCAGTTGATCACGAGCCAAGCACTGAAAAGAATGAAATTGAGAGTAGAGGTGGCTTCGTGTCAAATTTTCCAGGCAAGATTTTTTTATTCTCTCCACAAACTGCTTTGACGAGAAGTTTTTCCGTGTCGATTACTGAATCAGGAGATGTGGCTCGAGTCGATGGTCAGCTGGCAGTGGCCAGAGCATTTGGTGACAAAAGCTTGAAGGAACATCTGAGCTCCGAACCTCATGTGGTAGAGGCAATGATCAAAGATGAGACTGAGTTCATTATTTTAGCAAGTGATGGACTATGGAATGTGATGTCAAACCAAGAGGCTGCGGACTTTATCAAGGAGGTAAAGGATGCTCGGGCGGCCGCGAAGCAACTGACTGACGAGGCTCTTAAAAGGAGGAGTAAAGATGATATTTCCTGTATAGTTGTTAGATTTCAGTGA 834 43.65 MVKTITHGFHLVKGKSHRAMEDYVFAEFKQVGDKELGLFAIFDGHSSQNIPNYLQCHLFENILNEPDFWNEPANAVRKAYHMTDMIILDKAVDMGRGGSTAVTAILINGQKLVVGNIGDSRAIICTNGVAVQLSVDHEPSTEKNEIESRGGFVSNFPGKIFLFSPQTALTRSFSVSITESGDVARVDGQLAVARAFGDKSLKEHLSSEPHVVEAMIKDETEFIILASDGLWNVMSNQEAADFIKEVKDARAAAKQLTDEALKRRSKDDISCIVVRFQ 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12392406 12393725 - Bpe023132.1 Bpe08g01007 107883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01007 277 SUPERFAMILY PP2C-like 4 276 IPR036457 -
Bpe08g01007 277 ProSiteProfiles PPM-type phosphatase domain profile. 6 276 IPR001932 -
Bpe08g01007 277 SMART PP2C_4 2 274 IPR001932 -
Bpe08g01007 277 Coils Coil 239 259 - -
Bpe08g01007 277 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 180 277 - -
Bpe08g01007 277 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 174 - -
Bpe08g01007 277 CDD PP2Cc 13 276 IPR001932 -
Bpe08g01007 277 PANTHER PROTEIN PHOSPHATASE 2C 180 277 IPR015655 GO:0004722|GO:0006470
Bpe08g01007 277 PANTHER PROTEIN PHOSPHATASE 2C 1 174 IPR015655 GO:0004722|GO:0006470
Bpe08g01007 277 Pfam Protein phosphatase 2C 17 269 IPR001932 -
Bpe08g01007 277 Gene3D - 2 277 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00418 Bpe-Chr5:18577432 Bpe08g01007 Bpe-Chr8:12392406 1.48E-101 dispersed
Bpe08g01007 Bpe-Chr8:12392406 Bpe15g00676 Bpe-Chr15:17425668 1.10E-116 dispersed
Bpe11g00460 Bpe-Chr11:3574637 Bpe08g01007 Bpe-Chr8:12392406 2.38E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01007 K17506 - jre:109013230 386.726