Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01035 ATGGATTTCAGTACCCGTCTAGATCATGCCCTATTTCAGCTTACTCCCACCAGAACCAGATGTGAGCTGGTAATCGTCGCCATTGGAGGTTCTTCGGAGAAACTGGCCTCCGGGCTTCTACAGCCGTTTGTGACGCACTTGAAATGCGCGAAAGACCAGATTTCCAAAGGCGGTTACTCCATCACTCTTCGTCCGGCGGCTGGTTCAGACGCTTCCTGGTTCACCAAAGCAACTCTTCAACGATTTGTAAGATTCGTTAGTACACCGGAGATTCTCGAGAGATTTGTGACCATAGAGAAAGAAATATCGCAGATTGAATCTTCGATTCAATCTAACGAGTTATCAAATGGTTCGGCAGCAATCGAATTGGAAGGTTTACTTTTAGCAAAACTTTCTAAAGGGGACTCCAATGAAACCAATGGAGATGCTGCACCAGAGGAGAATTCCAAGACTCGCCTTCACCAAGTTCTCGAGACACGGAAAGCAGTGCTTCACAAGGAGCAGGCAATGGCATATGCTCGAGCATTAGTGGCGGGTTTTGAATTGGACTATGTCGATGATCTTGTTTCTTTTGCTGATGATTTTGGAGCTGCGCGATTAAGGGAAGCATGCATAAACTTCATGGATTTGTGCACGAAAAAGAACAAGGAAAGGCAATGGATTGATGAAATAGCAGCAATGCAGGCTTGCTCTCAGTCGGCATTTCCATACTCAGGGAATTCTGGAATCATACTTGCGGGTGAAGATTATGATACTACCCAGAGGAGTCTTGTCTTTAATGGCCTACCAAATGGCGCAATGGACGGATCCGAATCGGCTGCAAGTGTGGACGCAAATCAAGATGGAACCTCACCAAAACCAGCTCCAGTTATATCTGCTGATGGAAAAGCTCAACCAACAATGGCTTGGCCAAATCTTCTGCCCCAGTACATGCAGAATTTTCAGGGCCCTTTATATCCTCAAATGCCTCCATACCTCTTTCCTGGCATGCAGTTGGCTCCTCCTTATTATGCAGGCATGCAATGGCCGATCAATGGTGAAGACAACGGTCTTGTGCACGACCGTGAGTCGAATCATCGTCAAAATCTCAAATCAAATAGAAATAAAAAGAATGTTTTTGATAAGAAAGTCAATGACTTGGTCGAACGAGATGGTTCCACTGAAGCCAGCGACTCCAGCTCTGAAAGCGAATCAGAAGAGTTTTTGCAAAACGGTAAAAAGCAGTCTTCAACGAAAGCGAATAAGATAAAGCACGGAAAGAAATCCTCGAGAAAGGTTGTTATTCGCAATATTAATTACATCACTTCTTCAAAAGATGGCGAAAAGGGCAGTTTCTCCGACGAGAATTCATCCGGTGAGAGTGACTACATAGACGGAGATTCTCTCAAACAGAAAGTGGAACAAGCTGTTGGGACATTGGAGAGAAAACACAAATCTAACAGACATCTTGGTAAGAAACAAAATGGGTTGGTCATGCTCGATGATTCTGCTAATAAGGGAATGAAAAATCTTGCTGTGGATAAATCTGAGGGAGAAAAGGTGAATGACCATTGGGGTGCTTTCCAAAATCTTCTGATGAGAGATGAAGAAAGTTCAAGATCAGAGCTGACCTCTTTACAGATTCAGGGGGATCATTTTCCGACTAAAAGATCTATCGGAAGCTCCTCACCGTTCGACATGGAATCCGAGCAACTAATGAAGCAAAGAGAGGTTTCATCTGATTCGTTTGTCGTGACAGATAGAAGTATGGGCAAAGAAGGAAGAGCTGCCATTGAAAGCTTCGAAAATGGTGAAAATGTCCATCCAATTAGGAAAACCAGAGACACCACTTATGAAGAATTGTTATTTTCCCAGAAAGATGGAGAAACAGGAGGTTATTCACATGCTGTTCTGTCTGATTATGCCTCTGAATCCTCCATAATCAAGCGCCAGCAAGGAGAGTTGTTTATCGGCAAGAACATTAAAGATGAACAGGACAATCAATACGAAAATTCACGGCCGGAAGTTTTTGACAGTTTTCATAGTACCAAGAGAGATGTACTGGCCGACGATTCTTTCATGATTCAAACTCGTTTGAGCGATGATCGCCCAGATTCTTTTTCGACGACGGACATAAGCATGGTTTCATACATTGTTGGACCTGTTGAAAAAGTAGAAAGCGTCCCAGAATCTAAGCCAGTTGATTTTGAGCCTGATGACCTTTACATGATTCTCGAACGAGACTCTTCTGCCGATCAGGCCACTGTCTCCTGGACTCCGGAAATGGATTACGAAAATAATATTTCGAGCCACGAAAAGAAATCAATCCCTGAAGATCATCTGGCTTCCGATGATTCGAAGAGTACTAGTAAAAATATCGGTACTTCCGGTGGGAAGGTTTTGAGTAAAGACGGAAGATCTAGAGTTGCAGGTTCTCTAGGGAAGACGAGGCCCGAAATTACGTCGAGAATCAAGAAGCAGCCTCCTGGAAGTAGAACTACACCTCAGAAGAGCAAAGCTGAGAAGGAAGAAGAGAATAGAAAGAGACTGGAAGAGTTGCACAATCAAAGGCAGAAAAGAATTGCAGAGAGAAGCGGTGGAAGTGAGTCTGCAACTTCTAGAACTCCTGTGAATTCCATAAAAAATGAAAGGCTGAGAACTCAATCACCAACCCAAGAAGCTAAGAAGTTGCTGCCAAAGCCCGTTCTTCGGAGCTCCATCGATCGCCTCTCGACTGCTAGAAAAGTGCCGACAGAAACTCAATCCAGGCATTCGCAGCCGAAGAAATCAATCTCAAAATTAGCTTCTGCCAAAGAAATCTCTTCGGATTCAGTAAACGACTCAAAGACTTTGATTCGATCTCGTTCTTCGGTTTCTGATGTCGAGGTAAAAAACAAAACAACCGAAGAGATAGCAATTCATACACCTCAACTTACTGATTCTCTTAATGATAGGGGAGATATTAAGGAGATGAACACTTCATCTTCACCCGAGAAGAATTCTGATTCGCTCATTTTGGATTCGTCTATTCGCGCCGAAAATCGTCTTCCACCGTCAGATCAGTTGGATGGTGATGACTCGAGATCTAAACTATCCATGCCTGTTGATGAAGAGAGAACAATTTCCAGCCATGAAAACAGTCTGCAAATTGTGGTATCACCCAGAAAAGCTTTAGAAGAAAACAATGCAAATGAGAACTTTCCGGATTCGCCGGAGATTTGTACGGTAGAAAGCTCAACCACTCCGCCTAGTAATGGAGTAATCAACTCGAGGAAGAAATGGATGAGCGAAGAAAACTGTTCGAAATCAACTAAAGGATTCAGAAAGCTTCTTCTGTTCAGCAAGAAAACCTGA 3333 43.47 MDFSTRLDHALFQLTPTRTRCELVIVAIGGSSEKLASGLLQPFVTHLKCAKDQISKGGYSITLRPAAGSDASWFTKATLQRFVRFVSTPEILERFVTIEKEISQIESSIQSNELSNGSAAIELEGLLLAKLSKGDSNETNGDAAPEENSKTRLHQVLETRKAVLHKEQAMAYARALVAGFELDYVDDLVSFADDFGAARLREACINFMDLCTKKNKERQWIDEIAAMQACSQSAFPYSGNSGIILAGEDYDTTQRSLVFNGLPNGAMDGSESAASVDANQDGTSPKPAPVISADGKAQPTMAWPNLLPQYMQNFQGPLYPQMPPYLFPGMQLAPPYYAGMQWPINGEDNGLVHDRESNHRQNLKSNRNKKNVFDKKVNDLVERDGSTEASDSSSESESEEFLQNGKKQSSTKANKIKHGKKSSRKVVIRNINYITSSKDGEKGSFSDENSSGESDYIDGDSLKQKVEQAVGTLERKHKSNRHLGKKQNGLVMLDDSANKGMKNLAVDKSEGEKVNDHWGAFQNLLMRDEESSRSELTSLQIQGDHFPTKRSIGSSSPFDMESEQLMKQREVSSDSFVVTDRSMGKEGRAAIESFENGENVHPIRKTRDTTYEELLFSQKDGETGGYSHAVLSDYASESSIIKRQQGELFIGKNIKDEQDNQYENSRPEVFDSFHSTKRDVLADDSFMIQTRLSDDRPDSFSTTDISMVSYIVGPVEKVESVPESKPVDFEPDDLYMILERDSSADQATVSWTPEMDYENNISSHEKKSIPEDHLASDDSKSTSKNIGTSGGKVLSKDGRSRVAGSLGKTRPEITSRIKKQPPGSRTTPQKSKAEKEEENRKRLEELHNQRQKRIAERSGGSESATSRTPVNSIKNERLRTQSPTQEAKKLLPKPVLRSSIDRLSTARKVPTETQSRHSQPKKSISKLASAKEISSDSVNDSKTLIRSRSSVSDVEVKNKTTEEIAIHTPQLTDSLNDRGDIKEMNTSSSPEKNSDSLILDSSIRAENRLPPSDQLDGDDSRSKLSMPVDEERTISSHENSLQIVVSPRKALEENNANENFPDSPEICTVESSTTPPSNGVINSRKKWMSEENCSKSTKGFRKLLLFSKKT 1110
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12583431 12588485 - Bpe023159.1 Bpe08g01035 107911

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 437 460 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 759 779 - -
Bpe08g01035 1110 PANTHER COP1-INTERACTING PROTEIN 7 1 1109 - -
Bpe08g01035 1110 Coils Coil 832 853 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 1054 1082 - -
Bpe08g01035 1110 PANTHER COP1-INTERACTING PROTEIN-RELATED 1 1109 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 743 941 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 904 941 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 349 423 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 963 1001 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 743 758 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 349 390 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 1011 1036 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 829 857 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 396 410 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 962 1038 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 858 887 - -
Bpe08g01035 1110 MobiDBLite consensus disorder prediction 269 288 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01035 - - - mcha:111010382 945.651
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00856 Bpe-Chr5:21748732 Bpe08g01035 Bpe-Chr8:12583431 2.19E-51 dispersed
Bpe08g01035 Bpe-Chr8:12583431 Bpe06g00811 Bpe-Chr6:18272754 1.14E-07 dispersed
Bpe08g01035 Bpe-Chr8:12583431 Bpe10g00711 Bpe-Chr10:13521013 8.57E-14 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g264 . Blo03g01535 . Bda09g00491 . Bpe08g01035 . . . . Cma01g01195 Cma09g00882 Car01g01020 Car09g00800 Sed04g3168 Cpe06g00706 Cpe02g00714 Bhi09g03391 Tan01g4426 Cmetu07g0553 . Hepe01g1368 Mch11g1091 . Cla11g01780 Cam11g1844 Cec11g1865 Cco11g1875 Clacu11g2006 Cmu11g1815 Cre11g2223 Cone6ag0128 Cone9ag0152 . . . Csa04g02365 Chy07g00094 . . . . . . . Bma07g01191 . . Cmo01g01249 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003665 1 3 1 1 1 0 2 1 0 1 1 1 2 1 2 2 0 2 2 1 1 2 1 1 1 1 1 4 3 2 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe08g01035 Bpe_Chr08 FPKM 8.531988 7.4627 1.70253 2.735243 17.300491 22.753288 16.335623 0.0 0.0 0.0