Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01046 ATGAGCCAGCCTAAAGTAAAGCGTAGGGTAGGTAAATATGAGGTTGGAAGAACAATTGGCGAGGGGACATTCGCGAAAGTCAAATTTGCGAAGAATTTTGAGACGGGAGAACCTGTTGCCCTTAAAATACTCGATAAAGAGAAGGTTCTCAAGCACAAGATGGCCGAACAGATTAAGCGGGAGGTAGCAACAATGAAGTTGATAAAGCATCCGAACGTTGTGCGATTGTTTGAGGTAATGGGAAGCAGAACAAAAATCTTCATTGTTTTGGAGTTTGCCACTGGTGGGGAACTGTTTGACAAAATTGTAAGCCATGGGCGTATGAGAGAAGATGAAGCAAGGCGATATTTTCAGCAGCTTATAAATGCAGTCGATTATTGTCACAGTAGGGGTGTCTACCATCGAGATCTTAAGCCAGAAAATCTGCTTTTAGATGCTCATGGAAACCTTAAAGTTTCTGATTTTGGATTGAGTGCGCTTTCTCAACAAGTCGGGGACGATGGCTTGCTTCACACTACTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTCAACGATAGAGGCTATGACGGGGCAACATCGGACGTGTGGTCGTGTGGAGTCATACTCTTTGTACTCCTTGCTGGTTACTTGCCTTTTGATGATTCTAATCTTATGACCCTTTATAAGAAAGTGAGCATTCAACCAAACATTATGCAATCCTCTTATCTTCTTCTTCTTCCTCTTCTTCTATTACTTCCACTGTGTTGCCTGCAGATTTCTTCTGCTGAATTTACTTGTCCTCCATGGCTATCTTTCGAAGCCATGAAATTGATAGCTCAGATTTTGGATCCTAATCCTATGACGAGAATCTCGATATCTGAAATTTTAAGCGACGAATGGTTTAAGAAAGGCTATAGTCCGCCTGTATTTGAAGAGAAACAGGACGCGAATTTAGACGATGTGGAAGCCGTTTTCAAAGATTCAGAGGAACACCACGTGACAGAGAAGAAGGAAGAGCAGCCAGCTGCAATGAACGCCTTCGATCTAATATCCATGTCGAAAGGACTCAACCTTGGAAATTTGTTCGATGTAGAACAGCAGGAATTTAAGAGAGAAACTAGGTTTACATCTAAATGCCCTGCAAAAGACATTATAAACAAGATACAAGACGCTGCGAAACCTCTCGGTTTTGATGTACAAAAGAAGAACTACAAGATGCGGCTCGAAAATGTAAAGGCGGGACGGAAGGGAAACCTTAATATTGTGACAGAGATTTTTCAAGTGGCGCCCTCTCTTCACATGGTCGAGGTCCGAAAAGCAAAAGGCGACACTTTGGAGTTCCACAAGTCAAATGCCATGTCAATTTGCAATGCTTGTGGGTTGACAGAGACAACCCGAATGGAACGATCAAGGAGATACCTCTTGTATGTTAAAGGTTTGTTGCAAGATCAGCAGATTAATGAGTTTTCGGCGATGGTTCATGATACTGGGAAAATTATCAAAGATGGAGAGACGATGAACAAGACACTAAGGCAAATTGTGAAAAACACTCTAAAAGTGAATCCGAACCCAATTATTAGCATCCATGATCAGGGAGCCGGTGGGAATTGCAACGTTGTCAAGGAAATCATATATCCAAAAGGTGCAGAAATTGATATTCGTGCGATAGTTGAGGTTCCAAAAGTGGTCGAAGGTGAAGATGCAGCCGTTCATGTTGGCGGTTGGATTTCAGGGGCTTATGTTGATCGCCTACATGTTGAGGTTGCTGCAGTGCCTGAGGATGTTGGAACAGCTGGAGCGCTTAGAGCCATTGCTCACCAATTGACAGCTAATGACATTTTGGTTGTGAGTGGTGATTTTGTATCTGATGTCCCTCCTGGTGTAGTGGCAGCTGCTCATAGAAGGCATGATGCTGTAGTGACTGTAATGCTGTGCTCCTCTCCTGTTAGTGGTCCTCCAGAATCCGGATCGTCCAATGGAAAAGATAAAGCCAAGAAATTAGGACGCCATAACATTATAGGATTGGATCCTGCAAAACAATTTTTGCTATATATGGCAACAGGTAGTGAAATTGAGAAGGATACTAGAATTCAGAAGAGCATACTTCGTGCAGTAGGTCAGATGGAAATTCGAGCTGATCTCATGGATGCTCACGTGTACGCGCTGAAGAGATCTGTTCTTCAAGAAGTTCTAGAACAGAAAGATACATTCCGAAGTTTAAGACGGGATATACTGCCTTACCTTGTGCGGAGTCAGCTGAATTCAGAAGTGTCATTAAACGGAATACTACGGGTTGAGGAAAATGGAATTGAGAAAGCTAATTCCCATAACAGCCAAGTGATGGTGTCACAAATTTTGGCTAATGCATCTTCTCCAAGCTTTCATCAAAATAGTTCATTGGGTTCTAATGGATCTACCCTTGTTCGAAGGACACATAAATGTTGTGTTTATATTGCTGGCAATACCAAGTATTGTGGGCGCTTAAATTCTATTCAATCATACAATGATATTAATCGGGATATCATTGGTGAAGCAAGACATCTTTCAGGGTATTCCTTCTCTCCTCAAAACAATATAATTGATCCTTCTGCAGAGGTTGGATCGAAAACAACTGTGGGACCACAATGTCTGTTAGGGGAAGGCTCAGAGATGGGTGATAAGTGTAGTGTGAAACGGTCTGTGATTGGGAGACACTGCCGGATAGGTTCTGATGTAAAGATTGTTAACTCTGTTGTTATGAATCACGTAACTATTGCTGACGGCTGTTCAATTCAAGGTTCTGTAATTTGTAGCAATGCGCAACTTCAGGAGCATGTTGTATTGAAAGACTGCCAAGTAGGAGCAGGCTTTGTGGTTGTTGCAGGAAGTCATTACAAGGGTGAGGCCTTGGCTAGGAAAGACAAGTAA 2892 42.5 MSQPKVKRRVGKYEVGRTIGEGTFAKVKFAKNFETGEPVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVRLFEVMGSRTKIFIVLEFATGGELFDKIVSHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAHGNLKVSDFGLSALSQQVGDDGLLHTTCGTPNYVAPEVLNDRGYDGATSDVWSCGVILFVLLAGYLPFDDSNLMTLYKKVSIQPNIMQSSYLLLLPLLLLLPLCCLQISSAEFTCPPWLSFEAMKLIAQILDPNPMTRISISEILSDEWFKKGYSPPVFEEKQDANLDDVEAVFKDSEEHHVTEKKEEQPAAMNAFDLISMSKGLNLGNLFDVEQQEFKRETRFTSKCPAKDIINKIQDAAKPLGFDVQKKNYKMRLENVKAGRKGNLNIVTEIFQVAPSLHMVEVRKAKGDTLEFHKSNAMSICNACGLTETTRMERSRRYLLYVKGLLQDQQINEFSAMVHDTGKIIKDGETMNKTLRQIVKNTLKVNPNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAIVEVPKVVEGEDAAVHVGGWISGAYVDRLHVEVAAVPEDVGTAGALRAIAHQLTANDILVVSGDFVSDVPPGVVAAAHRRHDAVVTVMLCSSPVSGPPESGSSNGKDKAKKLGRHNIIGLDPAKQFLLYMATGSEIEKDTRIQKSILRAVGQMEIRADLMDAHVYALKRSVLQEVLEQKDTFRSLRRDILPYLVRSQLNSEVSLNGILRVEENGIEKANSHNSQVMVSQILANASSPSFHQNSSLGSNGSTLVRRTHKCCVYIAGNTKYCGRLNSIQSYNDINRDIIGEARHLSGYSFSPQNNIIDPSAEVGSKTTVGPQCLLGEGSEMGDKCSVKRSVIGRHCRIGSDVKIVNSVVMNHVTIADGCSIQGSVICSNAQLQEHVVLKDCQVGAGFVVVAGSHYKGEALARKDK 963
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12655465 12675976 - Bpe023170.2 Bpe08g01046 107922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01046 963 PANTHER - 253 444 - -
Bpe08g01046 963 PANTHER - 2 227 - -
Bpe08g01046 963 Pfam Protein kinase domain 13 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g01046 963 CDD LbH_eIF2B_gamma_C 872 952 - -
Bpe08g01046 963 ProSiteProfiles Protein kinase domain profile. 13 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g01046 963 Gene3D Hexapeptide repeat proteins 847 956 - -
Bpe08g01046 963 SUPERFAMILY Protein kinase-like (PK-like) 9 320 IPR011009 -
Bpe08g01046 963 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 561 843 IPR029044 -
Bpe08g01046 963 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 253 444 - -
Bpe08g01046 963 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 2 227 - -
Bpe08g01046 963 Gene3D Kinase associated domain 1, KA1 333 455 - -
Bpe08g01046 963 CDD STKc_SnRK3 12 295 - -
Bpe08g01046 963 SMART serkin_6 13 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g01046 963 CDD CIPK_C 340 444 - -
Bpe08g01046 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Bpe08g01046 963 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Bpe08g01046 963 Gene3D Transferase(Phosphotransferase) domain 1 93 302 - -
Bpe08g01046 963 SUPERFAMILY PurS-like 445 490 IPR036604 -
Bpe08g01046 963 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Bpe08g01046 963 ProSiteProfiles NAF domain profile. 334 358 IPR018451 GO:0007165
Bpe08g01046 963 SUPERFAMILY Nucleotide-diphospho-sugar transferases 573 928 IPR029044 -
Bpe08g01046 963 Pfam NAF domain 336 396 IPR004041 GO:0007165
Bpe08g01046 963 SUPERFAMILY Trimeric LpxA-like enzymes 844 955 IPR011004 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01046 Bpe-Chr8:12655465 Bpe14g00922 Bpe-Chr14:6876097 0 dispersed
Bpe08g01467 Bpe-Chr8:15388473 Bpe08g01046 Bpe-Chr8:12655465 8.58E-07 transposed
Bpe11g00973 Bpe-Chr11:7228150 Bpe08g01046 Bpe-Chr8:12655465 0 transposed
Bpe13g00085 Bpe-Chr13:5643540 Bpe08g01046 Bpe-Chr8:12655465 9.42E-13 transposed
Bpe11g00971 Bpe-Chr11:7220536 Bpe08g01046 Bpe-Chr8:12655465 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63475 PF00069 Pkinase 1.40E-70 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01046 K03241 - tcc:18590051 749.584