Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01054 ATGGCGCTGCCTTCCGCGGCTTTGGGTTTGACCGTCTTCGGTGCGGAGGTTCGGAGAGCGCACGCCGCCATGGCTTTAGTTCAGTTAATCAACGGAGGTTACCATGTTATTACCAAAGTTGCTCTCAATGTCGGGATTAACCAGCTTGTTTTCTGCGTCTTTCGTGATCTTCTGGCACTCTCTATCCTAGCCCCCGTCGCGTATGTCCGTGAGAAACGGGTTCGCTTGCCAATGACGAGGCATCTCCTCGTGTCATTCTTCTTTCTTGGTTTAACTGGGATATTTGGCAATCAGCTTTTGTTTCTTATTGGCCTTGGCTATACCAATCCAACTTATGCTGCTGCTATACAGCCTTCAATTCCAGTCTTCACATTTCTCTTTGCAGCTGTTATGGGTACAGAAAGAGTGAACTTTCTCAAATTGGAAGGGCAGGCCAAAATTGGAGGGACTCTCATCTGTGTTTCTGGAGCCATATTGATGGTTTTGTTTCGTGGCCCCGCTTTAGTTGGAAATGCAGAGTCAGACTTTATGTCTCAAAGTGAAATAAGTGCGAGGGGTCAGCCAGAACCATCTGGATGGTTGGTGTCTAGTTTTCTGGAATTTGGGCTAAATCATTTTCACCTTGGAGTGCTATGCTTAATAGGGAATTGCATGTGCATGGCTGCTTTTCTTGCTATTCAGGCACCAATTTTGAAAAGGTATCCTGCCAATTTATCAGTGACGGCATATTCATACTTCTTTGGTGCAATATTGATGGTGATAACGTCATTAATTGTAAACAATGAGTCTACAGATTGGAATTTGACACAATCAGAAGTTCTTGCCGTTCTCTATGCTGGTATTGTGGCATCTGCCCTTAACTATGGACTTCTAACCTGGTGTAACAAAATCTTAGGGCCTGCGTTAGTGGCCCTCTACAATCCACTTCAACCTGCTGCGTCTGCATTTCTATCCAGAATTTTCCTCGGGAGCCCAATTTATTTAGGAAGTGTTTTTGGAGGAGTTTTAATCATAGCTGGTCTTTATTTGGTGACATGGGCATCATACAGAGAGCGACAAACAGGTTCCGGGATGGGGGGAATTCATCCTCACATGGCTCGGGAGTCCGAGCCGCTCATTCACAAGGACGCATTAAGTAACATTATGTCTCACAAATTTGGACAAATTTTCTCAGCAACCTCTTCTCCAATATCTAAACCCATAGATTAG 1209 44.75 MALPSAALGLTVFGAEVRRAHAAMALVQLINGGYHVITKVALNVGINQLVFCVFRDLLALSILAPVAYVREKRVRLPMTRHLLVSFFFLGLTGIFGNQLLFLIGLGYTNPTYAAAIQPSIPVFTFLFAAVMGTERVNFLKLEGQAKIGGTLICVSGAILMVLFRGPALVGNAESDFMSQSEISARGQPEPSGWLVSSFLEFGLNHFHLGVLCLIGNCMCMAAFLAIQAPILKRYPANLSVTAYSYFFGAILMVITSLIVNNESTDWNLTQSEVLAVLYAGIVASALNYGLLTWCNKILGPALVALYNPLQPAASAFLSRIFLGSPIYLGSVFGGVLIIAGLYLVTWASYRERQTGSGMGGIHPHMARESEPLIHKDALSNIMSHKFGQIFSATSSPISKPID 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12719588 12724138 - Bpe023178.1 Bpe08g01054 107930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01054 402 PANTHER WAT1-RELATED PROTEIN 18 391 IPR030184 GO:0016021|GO:0022857
Bpe08g01054 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 263 350 - -
Bpe08g01054 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 163 - -
Bpe08g01054 402 Pfam EamA-like transporter family 24 159 IPR000620 GO:0016020|GO:0016021
Bpe08g01054 402 Pfam EamA-like transporter family 208 345 IPR000620 GO:0016020|GO:0016021
Bpe08g01054 402 PANTHER WAT1-RELATED PROTEIN 18 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01714 Bpe-Chr2:19613451 Bpe08g01054 Bpe-Chr8:12719588 1.79E-80 dispersed
Bpe08g01054 Bpe-Chr8:12719588 Bpe08g00917 Bpe-Chr8:11610769 5.18E-50 dispersed
Bpe11g00985 Bpe-Chr11:7322971 Bpe08g01054 Bpe-Chr8:12719588 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01054 - - csv:101222886 630.943