Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01073 TTTATGAGCAGAGAATATGTTCTTAGTTCTCGAAGTAAGGATATCAAAGCAAACTGGCCATTTTCTCCAAAAACATTGCAGATCTGCTTGAAACATGGCGTGAAGGATCTTCTGCCACCTTTTCAGCCTCTTCGTTCAGTTAAAGCTCCGTCCATTGGTGTATGTACCATTGAACATGCTAAGCCTGAGAGCAGAAGTATAAGCAGCGTTGCTCAGTGGGATCATCGTGATATGTTAAACTCTTCAAATTTTGAAAAATCAAACGAGAAGCGAACACAAACTTGCATAGAATCCAACTCGTGTAGATTTGAAGGAGGAAATGATTTACAGTCCACAACAACCAGTCTTTCTCCATCTGAAATCAATTTGATTCCAACTATCCGCACTTCAAATTCATTACTAGAGTTCAATTCATTATCGGAAGCCCAGGCTGAAACCGAGGCTGCAGAGCCTCAAATATCCAGAAAGACCGAGAGGATGGCCAAACCGTTGGGTAAGAAGTGCCGATTTTCGGTTAAGTACGGAGCCCAGGCCTATCAAGCCTCAGGTGAAGATATTGTTTCCAACTGTACTGCAACATCAGAGGCAATGGCTTTAAAAACTTGTCCTGTATGCAGAACTTTCTCATCACCTTCAAATACTACCCTAAATGCACATATCGACCAATGCCTTTCTGCGGAATCAACCCCTAAATGGTCATTGGATTCTATATCTATTAAGCATATATTTAAGCCAAGAAAGACAAAGTTGTTGCTGGATGTTTATACTACTGCCTTACCATGCACATTGGAAGATCTCGACCGAAGAAATGGTACAACCTGGGCCATAGCATCGACTCCAGATATTGAGAAATCTGATATGCATTGTGAAGGGGAAAGGGATAGTGGGTTTTTAGCTCCCCCTAAGATTAATAATGAAGATGGAGTATACTTTGATGCCAAAGGAACCAAACTTCGAATTTTATCTGCGTTTAATGGCGAATCGTGGTCAAAAGTGAAAGATAATCTTCAATCAACAAGACCCAAGAAGGAAGATGAAGGTAAAAATATCAAGTTATCGAAAAGAAAAAAATACCATGCATCTAAGCATAAAAAATTCCGTAAACTTGCCGTTCAAAGGAAACAAATTTCTCCTCAAAAGGACCCTACAAGTCAGGTACATGCTCGTTTCTTCTCTCGTTTCTTTTTTGAACAGATTGATAAAGGTCATGACGGATCCAACAGATTGGAAGAAGGTTGCAAGATGGACAAATATCAGATGAAGTCCAGAAAACCTCATGATTCTGGATGTTTAAGACAATGGAAATGCTCCAAACGAACTGGGGTTGCAAAAAAGGTCACAAGTAAAGAAGATACAAAATTTAAATGTAAATGGCTCGTATCAGAAGACTTGTTGGTTCAGTCCGACCAATCACATTTAGATGATATGAATGAGAAAAATTTTGCTCAGAGACTTACTAACATATCGGAAAATCCAATTTTTTCTCCTGAAAACATAAATTATTCAGAGACAGAATGTCCGTTATATGGCGATCGAGTTTTGAACAATGGGGGACTTATCAGAGATGTCAATGCCCTTCCACCAATGAAGGAAAATGTCTACGAGCTCAATAAAGGAAGGCCTTCCGTGGGCGATGGGTTCTTAATGAAACCTCCAAATCTCAATGGGGATAGTTGTGATATCTTGTCAAAGGATTCTCAAGCTACTGTTTTAGAATACACAAAATTCTACGAGTCAAGTGAAAATATGTCTTCTTTTAGTGAGTTGTTATCCAAAAGGGGATCTAGATCTCCTCTAGTGAAGAAACGATCGGCCCTTGCGAATAGTCAAGCTGATTTCAGGGCAAAAATAGACGGAAAGATAATGAGTTTGCATTCTGAAAAAGATCGAAGATGTAGGTTGCTTGACAGGAGTTCTGAAAGTTGGTCAGAAAGAGAGGAGATTGCTGCAGTTCTTAAAAGTTGGGTAAAAGTGAACGAAAACGGAAGAAGACTACTGAGCTTCTCTCAAAGGAATGAAGCCGTGGGATTGACAAGTTTGTCATCAGGTTCTCCGACCAGTAAACTCTGTGATGATGATAACTTACACGCTTTTGTTCATGGAGGTTTAAAGTGTTTCAATGGAAAGACGGGAATTAAGTCTGCTGGAGAAGTTCAAATTCACAAGGAAAGCACTGCCATTAAATCATCTTCAAAAGCGATGAGTTTGGCAAATTCTGTGAATCCAAATGTTCATGAGCTGTTCGATAGCTCCATCACAAGATCAGGCCTCTTGCCGGTAAGCATTAGTCGTAAACAGCCAGCATACGGAGGTGAAGAACAGGATCTCGAAACCAAGCTTGAATTTGATTATCGGCAAGAATCGACGGGTGTGATTAGGTACAATGCTCATGAAACTGGGGAGTTTCATTCTGAAACAAGTCTGGCTAACTCTTTCGATCCCATACTTATTCCTGGACCGCCCGGATCGTTTTTGCCTAGTCCTGGGACAATGCAATCAGATGAATTTCAAGGAAATTCCTCTCTAACCAGTAGCCAAGTTCTCTCTGATGAACAAGATTTCACAGATGGAGATTCATCAGATTCGCCAATTTCTTCGGCGTCAACCTTCTCAACTTTCACAGCAGCTAGAATTGATTTGGATTACTTTGCACCTGACCAACCAAATGCCTTTGAAACCGAGCCAAGGTCTGTACTTTTGAGTCATGATTTGGAGCCTCCAACGGGGAATACTACTACTCGAACCGAGAACATTACTTGTGACAGAGAAATTCTTGAGGAAAATTTCTGCTGTTGCCAAAGAGAGGAAAAAAATCCTCCTGGAGTTAATTTAAACTATCATCAACCGCAGCCGTTGAAGCATCTGTCATTTCCTGCAGTTGCCAATCCTTGCTGTAATAAGCAAAAGGGTTACAATCTAAACAGAAGACTCAATGATTTTGAAATCCCTCCTTTGTGCTGTTGTAATCGGTCAGAAAAGGCCACTGCATATGCTCGTATAGGGCAGTTCCCTGAAGATGTCTTTCGTTCTATAAGCACCCCGAAAGAACTGGGAGTGAAGCTTCCAGATTGTGGCAATTTTGAGAGTGCTACTTCATCTTCTTCTAACCCTGTTCTGAGGTTGATGGGGAAGAATTTGATGGTGATCAACAAGAAGGAAGACGCATCTTCGAGAGTGGAGCAAACTAAACCATCTTCCCTGATCAACCCCGTCTCGGAGTTTCCGACAAATCTGAATACATCTTCTGGCAATTCTGCAAATAAAGACATCCATTTCTTTCATCACAGGGTTCACGAAGATAAAAATTCATGGAATTACACGGGTCGACATTTTGATGTCAGACTCTTGGATGGGATTTAG 3360 40.77 FMSREYVLSSRSKDIKANWPFSPKTLQICLKHGVKDLLPPFQPLRSVKAPSIGVCTIEHAKPESRSISSVAQWDHRDMLNSSNFEKSNEKRTQTCIESNSCRFEGGNDLQSTTTSLSPSEINLIPTIRTSNSLLEFNSLSEAQAETEAAEPQISRKTERMAKPLGKKCRFSVKYGAQAYQASGEDIVSNCTATSEAMALKTCPVCRTFSSPSNTTLNAHIDQCLSAESTPKWSLDSISIKHIFKPRKTKLLLDVYTTALPCTLEDLDRRNGTTWAIASTPDIEKSDMHCEGERDSGFLAPPKINNEDGVYFDAKGTKLRILSAFNGESWSKVKDNLQSTRPKKEDEGKNIKLSKRKKYHASKHKKFRKLAVQRKQISPQKDPTSQVHARFFSRFFFEQIDKGHDGSNRLEEGCKMDKYQMKSRKPHDSGCLRQWKCSKRTGVAKKVTSKEDTKFKCKWLVSEDLLVQSDQSHLDDMNEKNFAQRLTNISENPIFSPENINYSETECPLYGDRVLNNGGLIRDVNALPPMKENVYELNKGRPSVGDGFLMKPPNLNGDSCDILSKDSQATVLEYTKFYESSENMSSFSELLSKRGSRSPLVKKRSALANSQADFRAKIDGKIMSLHSEKDRRCRLLDRSSESWSEREEIAAVLKSWVKVNENGRRLLSFSQRNEAVGLTSLSSGSPTSKLCDDDNLHAFVHGGLKCFNGKTGIKSAGEVQIHKESTAIKSSSKAMSLANSVNPNVHELFDSSITRSGLLPVSISRKQPAYGGEEQDLETKLEFDYRQESTGVIRYNAHETGEFHSETSLANSFDPILIPGPPGSFLPSPGTMQSDEFQGNSSLTSSQVLSDEQDFTDGDSSDSPISSASTFSTFTAARIDLDYFAPDQPNAFETEPRSVLLSHDLEPPTGNTTTRTENITCDREILEENFCCCQREEKNPPGVNLNYHQPQPLKHLSFPAVANPCCNKQKGYNLNRRLNDFEIPPLCCCNRSEKATAYARIGQFPEDVFRSISTPKELGVKLPDCGNFESATSSSSNPVLRLMGKNLMVINKKEDASSRVEQTKPSSLINPVSEFPTNLNTSSGNSANKDIHFFHHRVHEDKNSWNYTGRHFDVRLLDGI 1119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12878637 12882351 + Bpe023198.1 Bpe08g01073 107949

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01073 1119 MobiDBLite consensus disorder prediction 1054 1074 - -
Bpe08g01073 1119 MobiDBLite consensus disorder prediction 1060 1074 - -
Bpe08g01073 1119 PANTHER HAPLESS PROTEIN 4 1115 - -
Bpe08g01073 1119 MobiDBLite consensus disorder prediction 819 867 - -
Bpe08g01073 1119 MobiDBLite consensus disorder prediction 826 867 - -
Bpe08g01073 1119 MobiDBLite consensus disorder prediction 893 914 - -
Bpe08g01073 1119 Gene3D Classic Zinc Finger 200 227 - -
Bpe08g01073 1119 PANTHER HAPLESS PROTEIN 4 1115 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01073 - - - tcc:18593163 563.918
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00280 Bpe-Chr12:3106172 Bpe08g01073 Bpe-Chr8:12878637 2.06E-06 dispersed
Bpe15g00145 Bpe-Chr15:11646733 Bpe08g01073 Bpe-Chr8:12878637 4.72E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g790 . Blo03g01495 . . . Bpe08g01073 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag1275 Cone15ag1301 . . . . . . . . . . . . . . . . Cma16g00997 . Car16g00954 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006752 0 2 1 1 1 1 2 1 1 1 2 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe08g01073 Bpe_Chr08 FPKM 0.0 0.0 0.0 0.0 10.427979 19.124138 13.76678 0.0 0.0 0.0