Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01075 ATGGCATTTGAAGAACTGGGAGTTAATGGTGAATTTACCGGAAGAAAATCAGTTTTTGAATGTTCAGAAGATGAGAGACGGCGATCTAAAATTGGAAACCTCAAAAAGAAGGCAATAATTGCTTCAACTAAGTTCACTCATTCTCTCAAGAAGAGAGGAAAAAGGAAAATTGACTACAGAGTTCCTTCATTTTCCATAGAAGACATAAGAGATGCAGAAGAGGAGAATGCTGTCTTTGAACTGCGAAAGAAACTTGTAGAGAGTGATTTGTTACCACCTAGGCATGATGACTATCATACTTACTTAAGATTTTTGAAAGCTAGAGATTTTAACATGGAAAAAACGATTCAGATGTGGGAAGAAATGCTAATTTGGAGAAAGGAATATGGAACTGATTCCATATTGAAGGGATTTGAATTTGATGAGCTGGAGGAAGTGTTGCAGTATTATCCCCAAGGATACCATGGTATTGATAAAGAAGGAAGGCCAGTTTATATTGAGAGACTAGGAAAAGCTCATCCTAATAGACTTATGGACATTACAACAATTGACAGATATTTGAAATACCACGTCCAAGAATTTGAAAGGGCGATAAATGAGAAATTCCCTGCTTGTACAATTTCATCACGGAGACGGATCTGCACAACAACAACAATCTTGGATGTACAAGGGCTTGGAAAGAAGAATTTTTCTCGAACTGCTGCTAATTTATTGGCCTCCATGACCAAAATAGACGACAATTATTATCCAGAGACATTACACCGGATGTACATAGTTAATGCTGGTCCTGGTTTCAAAAAGATGATTTGGCCTGCTGCTCAGAAATTTCTTGATTCGAAGACCATTTCTAAGATACAGGTCCTGGAGCCAAAAGCCCTGGGTAAATTACTTGATGTCATTGATTCAAGTCAGTTGCCAGATTTCTTGGGGGGCTCTTGTTCCTGTGATGTTGAAGGAGGCTGCCTAAGATCTAATAAGGGTCCATGGAATGATCCTGAGATAATTAAGCTCATACATGATGAGACAACACTCATAAAGGAAATTGGGAAAGTGCCAACAAGTGAGGGCCATTCGCATGCTCAAATTCTTCAACTAAAGGACGTAACAGGAAAAAATGATGCGTATTCATCTTTTAAGCAGGGCAGGAGTAATCATACTTCAATCGCAGAGTCAAGGTTTGACAGTGATGATCTTTATTATCGGATGGGAAATAGGAGTTCACATTTGGCTCCGGTTGACCAAAAAGTCAAAGCATCAGATTCAAATGCCTACTGCAGTTGTGACGAGGAGGCATTTGAATGGAACAAAATTGAATCTTGCTCTTATCAATTATGTCTGAGAAATGACAAGGGAAATAATTGTTCTGTGTCAGCCTTGAATTCCAAAGGTAATAAAATCAGCCAATGGTTTGAAGCTATAAAGGAAAATCTGGATATAAGAAGTATCCAATGTATGACAAAAATGTTGACGCCATTGTGGGTCAGAGTAGTTGAATGTTTGCGTAGTTTACTGTTTCAAGTATGGACGAGTCAGAGCAACGAATGCCGTTCAAGCTCGACAGAACAGAAGACAAATAGCCATTCACTTGCTGTAGAATCAATTGACAAAGAGGATTATGTGAGTCCATGTTTAAAGCGTCTGGAGAAGCTGGAAAAAGTTTTGGAGGAGCTTTGCAACAAGCCTGCAGGAATTCCTTTAGAAAAGGAGCAAATGCTTACTGAATCTTTGGACAGAATCAAATCTGTTGAGTTTGATCTGAATCGGACAAAGAGAGTACTACATGCAAATATTCTTAAACAATTTGAGACGACACAATTGGTGGATAAATTACATGACACTGAATTTCGTGTAAGCGATTGCTTGATCCAAATATCTCGAGTAGCATTTAATTTCGCTCAACCTACTACATTTAGTCCACTTCTTTCCTCAATTGATTATATCCCACTTTATTCTCCTATCATTACTCGCCTGGCTAATGCTAATGTTGTGATGAATAGAGTTATTTCTGAGAGAAAAATAGTAGTGCACATCAAATAA 2037 38.19 MAFEELGVNGEFTGRKSVFECSEDERRRSKIGNLKKKAIIASTKFTHSLKKRGKRKIDYRVPSFSIEDIRDAEEENAVFELRKKLVESDLLPPRHDDYHTYLRFLKARDFNMEKTIQMWEEMLIWRKEYGTDSILKGFEFDELEEVLQYYPQGYHGIDKEGRPVYIERLGKAHPNRLMDITTIDRYLKYHVQEFERAINEKFPACTISSRRRICTTTTILDVQGLGKKNFSRTAANLLASMTKIDDNYYPETLHRMYIVNAGPGFKKMIWPAAQKFLDSKTISKIQVLEPKALGKLLDVIDSSQLPDFLGGSCSCDVEGGCLRSNKGPWNDPEIIKLIHDETTLIKEIGKVPTSEGHSHAQILQLKDVTGKNDAYSSFKQGRSNHTSIAESRFDSDDLYYRMGNRSSHLAPVDQKVKASDSNAYCSCDEEAFEWNKIESCSYQLCLRNDKGNNCSVSALNSKGNKISQWFEAIKENLDIRSIQCMTKMLTPLWVRVVECLRSLLFQVWTSQSNECRSSSTEQKTNSHSLAVESIDKEDYVSPCLKRLEKLEKVLEELCNKPAGIPLEKEQMLTESLDRIKSVEFDLNRTKRVLHANILKQFETTQLVDKLHDTEFRVSDCLIQISRVAFNFAQPTTFSPLLSSIDYIPLYSPIITRLANANVVMNRVISERKIVVHIK 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12890205 12893650 - Bpe023200.1 Bpe08g01075 107951

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01075 678 Coils Coil 69 89 - -
Bpe08g01075 678 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 16 612 - -
Bpe08g01075 678 SMART sec14_4 142 314 IPR001251 -
Bpe08g01075 678 CDD SEC14 143 311 IPR001251 -
Bpe08g01075 678 Gene3D - 23 129 - -
Bpe08g01075 678 SUPERFAMILY CRAL/TRIO N-terminal domain 71 136 IPR036273 -
Bpe08g01075 678 Pfam CRAL/TRIO, N-terminal domain 84 121 IPR011074 -
Bpe08g01075 678 SMART CRAL_TRIO_N_2 97 122 IPR011074 -
Bpe08g01075 678 SUPERFAMILY CRAL/TRIO domain 141 337 IPR036865 -
Bpe08g01075 678 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH13 16 612 - -
Bpe08g01075 678 Gene3D - 130 342 IPR036865 -
Bpe08g01075 678 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 142 317 IPR001251 -
Bpe08g01075 678 Pfam CRAL/TRIO domain 148 311 IPR001251 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01075 - - - pvy:116115555 753.821
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01075 Bpe-Chr8:12890205 Bpe12g00084 Bpe-Chr12:606269 2.29E-148 dispersed
Bpe11g00612 Bpe-Chr11:4653278 Bpe08g01075 Bpe-Chr8:12890205 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g880 . . . . . . Bma07g00966 Bma14g00111 Cmo06g00611 Cmo16g00575 . . . . . Cpe14g00445 . . . . . . . . Cla10g00110 Cam10g0105 Cec10g0114 Cco10g0115 Clacu10g0111 Cmu10g0958 Cre10g0368 . . . . Lsi07g01139 . . Cme06g02415 Blo03g00840 . Bda07g00139 . Bpe08g01075 . . . . . . Cma06g00604 Cma16g00526 Car06g00539 Car16g01140 . . . . . . . . . . . . . . . . . Csa03g00109 Chy06g02196 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003795 2 3 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 5 1 1 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe08g01075 Bpe_Chr08 FPKM 33.442478 35.552189 20.727358 19.895657 54.78344 51.588432 57.189419 19.572964 19.218204 20.216944