Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01094 ATGGCCTTCAGTGGTTCAGAGCAGCCCTTATTGTCCGGATTATTAGATCCTAATTGCGAAAGAAAGACAATGAATGCAACTATGGGGAAGAGAAGATTTCGTCGCACCAGAAGTGCTCCCATTGTAGATTCTGGACCTTCACAGGAAACTCGCTTTGACCCCAATCCACCTCCTGGGTCCATATTTGGGAATTTACACCTGAGTTTAACGAAAGTTGTTTTATTCTTAGCCATTTATCTTGGTATGGGAACTATATGTTTCTACTTCGTCAGGAACCAAATCAAGGGGCTAAAAACAAATGGAATAATTGATGCTGTCTATTTCTGCATTGTTACAATGACCACAGTTGGATATGGAGACTTGGTGCCTAACTCTGTACTTACAAAACTACTTGCCTGTGCTTTTGTCTTCACAGGAATGGCCCTAATTGGACTCGTACTGAGCAAAGCCGCTGATTATTTAGCAGAAAAACAGGAAATGTTTTTGGTAAAGGCCTTACATTTACAACAAACTACTTCTCCTGGTGCAACTATGAAAGAAATTGAGACCAATAAAGTGAAATACAAGTGCATATTGGTCTTTTTCCTTTTGCTGGTGCTCATAATTTCTGGGACTATATTTTTAATTACAGTTGAAGAGTTGGACCCCGTTGATGCTTTTTATTGCGTCTGTTCTACTATTACAGCACTAGGCTACGGGGATCGAAGTTTCTCGACTAGCGCTGGCCGTGTTTTTGCAATCTTCTGGATTTTGACCAGCACAATTTCTTTGGCTCAGTTTTTCTTTTACATCGCTGAGCTGCATTCTGAAAGAAGACAAAGGGCATTGGTCAAATGGGTTCTAAACCGGAAAACAACATGCTTAGATCTTGAGGCAGCAGATTTGGACGATGATGGAGTTGTGGGGGCCGCTGAATTTGTCATATTTAAGCTAAAAGAAATGGGAAAAATTTCCCAAGATGACATTTCAGTTGTCATGGAAGAGTTCGAGAATCTTGATGTTGATCAGTCGGGAACCTTAACAGTTTCTGATATAGAACAAGCTCAAGCATCTCAGAGAAAATTATAA 1068 40.36 MAFSGSEQPLLSGLLDPNCERKTMNATMGKRRFRRTRSAPIVDSGPSQETRFDPNPPPGSIFGNLHLSLTKVVLFLAIYLGMGTICFYFVRNQIKGLKTNGIIDAVYFCIVTMTTVGYGDLVPNSVLTKLLACAFVFTGMALIGLVLSKAADYLAEKQEMFLVKALHLQQTTSPGATMKEIETNKVKYKCILVFFLLLVLIISGTIFLITVEELDPVDAFYCVCSTITALGYGDRSFSTSAGRVFAIFWILTSTISLAQFFFYIAELHSERRQRALVKWVLNRKTTCLDLEAADLDDDGVVGAAEFVIFKLKEMGKISQDDISVVMEEFENLDVDQSGTLTVSDIEQAQASQRKL 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13015500 13016724 - Bpe023219.1 Bpe08g01094 107970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01094 355 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 21 345 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bpe08g01094 355 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Bpe08g01094 355 SUPERFAMILY Voltage-gated potassium channels 183 289 - -
Bpe08g01094 355 ProSitePatterns EF-hand calcium-binding domain. 294 306 IPR018247 -
Bpe08g01094 355 Gene3D - 65 160 - -
Bpe08g01094 355 SUPERFAMILY Voltage-gated potassium channels 66 162 - -
Bpe08g01094 355 Pfam Ion channel 75 155 IPR013099 -
Bpe08g01094 355 Pfam Ion channel 196 266 IPR013099 -
Bpe08g01094 355 Gene3D - 172 279 - -
Bpe08g01094 355 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 21 345 - -
Bpe08g01094 355 SUPERFAMILY EF-hand 283 348 IPR011992 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01094 Bpe-Chr8:13015500 Bpe12g00286 Bpe-Chr12:3331927 2.19E-60 dispersed
Bpe08g01094 Bpe-Chr8:13015500 Bpe15g00141 Bpe-Chr15:11549632 2.08E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01094 K05389 - tcc:108662931 448.743