Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01099 ATGGATTTGAGCGGTTTCAGCGGATTTTTTCTGTTTTTCTTGCTAGTTTTTGGGAGAATTCAAGTTGGTTTGGCAGAAAGTATTGTTTATGGAGAGAAGTATATAAGTTGGGATGATCTGAAGGTGGATAAAATGCAGATAATGAGTTATTCCGGCAACGAAAATCATAAAAGTCGGATTATTGTCGTCGATAAAAATGGCGGAGGAGATTCAGTAACAGTTCAAGGAGCTGTTGACATGGTTCCTGAAGAGAATACAAAGAGAGTGAAAATTTTCATTCTTCCAGGTATTTACAGAGAGAAAGTTTTTGTTCCAAGAAACAAACCATATGTTTCATTTATCGGCGACGAGAATCGAACTTCGGACACTGTAATTTCATGGAACGACAAAGCATCTGACAGAGATGAAAATGGGAACAGTCTAGGAACATACAGGTCAGCATCTGTAGCGATCGAATCGGATTACTTTTGCGCTACCGGGATCACATTCGAGAACACGGTAACGGCGGTGCCCGGAGGAGAGGGAATGCAAGCAGTTGCAGTGAGAATTGCCGGAGATAAAGCCATGTTCTACAAAGTTCGAGTACTGGGAGATCAAGACACTCTCTTAGACGAATCTGGAACCCACTATTTCTACAAATGTCACATTCAAGGAAGCGTAGATTTCATCTTCGGAAGATCCAAATCTTTATACCAGCACTGTATGCTTATATCAACGGCCAAGAACTACGGCGCCATTGCAGCTCATCACAGAGATTCTCCCGACGAAGACACAGGCTTCTCCTTCGTTCACTGCAAAATCAATGGAACTGGCAATGTTCTTCTGGGAAGAGCCTGGGGAAACTACTCGAGAGCAATCTACTCCTATTGTTACATGACAGATATCATAAACCCTCACGGCTGGAGCGACTGGAACTACCCATCAAGAGAAAGGACGGCGGTATTTGGGGAGTTCAGATGCAGAGGCAAGGGGGCTGATACGAGAGGAAGAGTCCCATGGTCGAAGACTTTCACCGTCGAGGAAGCCAAGCCTTTTTTAAACTTGAATTTCATCAATGGAGATCAGTGGCTTAGACTGTAG 1080 43.7 MDLSGFSGFFLFFLLVFGRIQVGLAESIVYGEKYISWDDLKVDKMQIMSYSGNENHKSRIIVVDKNGGGDSVTVQGAVDMVPEENTKRVKIFILPGIYREKVFVPRNKPYVSFIGDENRTSDTVISWNDKASDRDENGNSLGTYRSASVAIESDYFCATGITFENTVTAVPGGEGMQAVAVRIAGDKAMFYKVRVLGDQDTLLDESGTHYFYKCHIQGSVDFIFGRSKSLYQHCMLISTAKNYGAIAAHHRDSPDEDTGFSFVHCKINGTGNVLLGRAWGNYSRAIYSYCYMTDIINPHGWSDWNYPSRERTAVFGEFRCRGKGADTRGRVPWSKTFTVEEAKPFLNLNFINGDQWLRL 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13037297 13039018 - Bpe023223.1 Bpe08g01099 107975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01099 359 PANTHER PECTINESTERASE QRT1 25 359 - -
Bpe08g01099 359 ProSitePatterns Pectinesterase signature 2. 216 225 IPR033131 -
Bpe08g01099 359 Pfam Pectinesterase 61 354 IPR000070 GO:0030599|GO:0042545
Bpe08g01099 359 Gene3D - 59 359 IPR012334 -
Bpe08g01099 359 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 359 - -
Bpe08g01099 359 SUPERFAMILY Pectin lyase-like 58 357 IPR011050 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01099 Bpe11g00578 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00576 Bpe-Chr5:19865024 Bpe08g01099 Bpe-Chr8:13037297 1.93E-81 dispersed
Bpe06g00594 Bpe-Chr6:16801593 Bpe08g01099 Bpe-Chr8:13037297 1.97E-94 dispersed
Bpe08g01099 Bpe-Chr8:13037297 Bpe09g00075 Bpe-Chr9:528645 5.80E-87 dispersed
Bpe11g00578 Bpe-Chr11:4417256 Bpe08g01099 Bpe-Chr8:13037297 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01099 K01051 - jre:108983471 541.191