Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01101 ATGACTGGTTTTGAGTTGGCCGATGTTTTTCCTTCCCTTAAATTTCTTCATTTTGTTGGTGGATCTTATAATAAAGCAGAAAAAGCCCATAAAGAATGCGATCGAATCCTGGAAAACATCATAAATGCACATAGATCAGAGTCAGACAACGGGAAATCCGATGGAGATGTTCAAGAACCAATGGATCTTGTCAATATTCTTCTCAAAATTCAGGAGAAAGACGGCCTTCCGTTTCCCATAGCAAACGAGAACGTAAAAGCAATTATCTTAGATGTTTTCGTTGCAGGATCAGAAACATCAGGCACGCTGATCGAATGGGCGATCTCAGAGCTCGTAAAACACCCAGAAATGATGAAGAAAGCTCAGGCAGAAATCAGGCAAGTTTTCGGTTCGAAAGGAGAAATAGACGAAACAGGTCTCCAACAACTAAAATATTTCAAGCTGATCATAAAAGAAACGTTGAGACTACACCCTCCATTGCCATTACTACTCCCGAGAGAAAGCAGGAGCAATGGCGAAATCAACGGCTACCACATTCCGGCGAAAACAAAAGTGATCGTCAACGCCTGGGCGATCGGAAGAGACCCAAAAATATGGACAGACCCAGAAAGTTTTAACCCAGAAAGATTTATGGAAAGAGACGGAGACTTTAAAGGAGCAAGCTTTTATCAAATTCCTTTCGGAGCTGGAAGAAGAATTTGCCCAGGAATGGCGCTAGGGTTAGCGACTTCGGAGATAATTCTGGCGAATTTGCTCTACCATTTCAACTGGTTAGTTCCAGACGGAGTAAAACCAGAAGAGCTTGATATGGCTATCTTTAATGGAATAGCGTGCAAAAGGCTGAACGGATTGAAACTGATTCCGGTTCGTTATAATGGTCCGATCAAGACAACACCTTAG 900 42.33 MTGFELADVFPSLKFLHFVGGSYNKAEKAHKECDRILENIINAHRSESDNGKSDGDVQEPMDLVNILLKIQEKDGLPFPIANENVKAIILDVFVAGSETSGTLIEWAISELVKHPEMMKKAQAEIRQVFGSKGEIDETGLQQLKYFKLIIKETLRLHPPLPLLLPRESRSNGEINGYHIPAKTKVIVNAWAIGRDPKIWTDPESFNPERFMERDGDFKGASFYQIPFGAGRRICPGMALGLATSEIILANLLYHFNWLVPDGVKPEELDMAIFNGIACKRLNGLKLIPVRYNGPIKTTP 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13044695 13045712 - Bpe023225.1 Bpe08g01101 107977

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01101 299 Gene3D Cytochrome P450 2 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS P450 superfamily signature 225 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS P450 superfamily signature 95 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS P450 superfamily signature 148 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 SUPERFAMILY Cytochrome P450 5 289 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS E-class P450 group I signature 84 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS E-class P450 group I signature 147 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS E-class P450 group I signature 224 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS E-class P450 group I signature 104 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS E-class P450 group I signature 188 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PRINTS E-class P450 group I signature 234 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PANTHER PREMNASPIRODIENE OXYGENASE-LIKE 2 291 - -
Bpe08g01101 299 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 227 236 IPR017972 GO:0005506|GO:0016705
Bpe08g01101 299 Pfam Cytochrome P450 6 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01101 299 PANTHER CYTOCHROME P450 71B11-RELATED 2 291 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01101 - - K23806 zju:112488857 337.421
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01101 Bpe-Chr8:13044695 Bpe14g00734 Bpe-Chr14:5689444 1.21E-92 dispersed
Bpe08g01101 Bpe-Chr8:13044695 Bpe12g00675 Bpe-Chr12:12392523 2.05E-79 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g633 . . . Bda09g00418 . Bpe08g01101 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma07g01265 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000106 14 8 5 4 4 8 0 8 5 13 4 7 6 8 6 16 5 16 1 6 10 8 6 12 5 13 10 7 10 3 228
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe08g01101 Bpe_Chr08 FPKM 0.693501 0.0 0.519901 0.248452 0.469004 0.369459 0.234084 3.784546 3.914271 3.56597