Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01103 ATGACTTCCTTAATGCATTCTGGTATTGATTTCATTTTGGACCCTGTTTTCCTACGTGGGTTATCCGGTCTGTTGCACCTCGTCTTGTTATTTGGGTTATTTTTTCTCTGGGTGCGCAAACTATTGAAGCTGTATCGTGATGGAAGTCCAAAAGAAAGGCTTAGAAGCAGAGGGCGTTCGGTCGATAAGCTGACTTTTGCTTTGAGTCTCTGCTTTTCTGTTTTCAATCTTCTCTTTTGTTTTTTGAACTACTTTTACTGGTATAAAAATGGATGGTCTGAAGAAAATCTGGCGATACTTTTGGATATGGCTCTTAGAACTCTAGCTTGGTTTGCTGTTTCTGTTTATCTATACACCCAAGTTGGAAAAAAGCCTCCTTTTCCATTGAGAGTTTGGTGGGGTTTCTTCTTCTCTCTTTCTTGTTATTACATTTTCATCGACCTCATGCGTCACAAAAAGCAAGGTTTTGTACCAGTGCATGACATAGTTTTCGATGTTGTGTCGGCCATAAGTGGTCTATTCTTCACTTGTATGGGGGTTTTAGGGAAGAGGGTGAGTGATCAAACAAATCTTGAAGAACCACTTTTAAATGGTCATGTAGACGCCATTAATGAGTCTGGGAATTTTAAAGGGGACCAAACTGTTACCCCTTACTCGACTGCCGGAATTTTAAGTATTCTTTCCTTCTCTTGGATGGGTCCTCTAATTGCCACGGGCAATAAGAAGACATTAGATCTTGAGGATGTTCCTCAACTTTCCAGCAAAGATAGTGTCTCAGTGACTTATCCTACGTTTCAAAATAAGCTCGAATCCGATTGTGGTAGAATTGATGGAATCACCACATTTTGTCTGGTGAAGGCATTGATCTACTCTGCCTGGAGGGAGATACTTCTAACGGCACTTCTTGCCTGCCTCCACACTCTGGCTTCTTATGTAGGCCCGTATTTAATCGACACCTTCGTCCAATACCTCAACGGTACTCAGCAATTTGAAAATGAAGGCTATGTATTAGTAGCTGCATTTTTTGGTGCAAAGATTGTGGAGTGTCTATCAATGAGACATTGGTTCTTTAGGCTGCAAGTGGTTGGAATTCGGATGAGAGCAGTTCTTAACGCAATAATATACAATAAAGCTTTGACCCTCTCGGGCCAATCCAAGCAGAAACACACGAGTGGAGAGATCATTAATTTTATGACCGTCGATGCAGAGAGGGTCGGGGAATTTAGTTGGTACATGCACGATCCATGGATGGTCCTTCTGCAGGTTTCTTTGGCCTTGTTGATTTTGTATAAAAATCTCGGGGTTGCTTCAGTCGTAACTTTTGTTGCGACTGTAATTGTTATGTTAGTGAATGTTCCTTTGGGGAAATTGCAAGAGAGGTACCAGGACAACATAATGGAGTCAAAAGATAATAGAATGAAGGCAACGTCCGAAATCTTGCGAAACATGAGGATACTCAAGCTTCAAGGATGGGAGATGAAGTTTCTCTCGAAAATTGTTGAGCTAAGGAAGGTCGAGGCTGGATGGTTGAAAAAATATCTTTACACTATGGCTATGACCTCATCTCTCTTCTGGGGGGCTCCCACATTTATCTCCGTGGTAACTTTTGGTGCTTGTATTTTCATGGGGATCCCACTAGACTCTGGCAAAATTTTATCTGCTCTTGCAACTTTTAGAATTCTTCAAGAACCCATTTTCAATCTTCCTGACACAATATCAATGATGGTTCAAACTAAAGTTTCTCTAGACAGAATTGTTTCCTTCCTTCGACTTGATGACTTGCAGACTGATATTGTTGAACAGCTTCCTATGGGTAGTTCTGATATGGCAGTTGAGATGGCAGATGGGAATTTCTCATGGGATTTATCTTCTCCAAATTCAACTCTTCAAGATATTAACTTTAAAGTGTCCCGAGGTATGAGGGTTGCTATTTGTGGAACTGTCGGTTCCGGCAAGTCGAGCTTGCTTTCATGTATCTTAGGAGAGGTACCTAAGATTTCAGGAAGTCTTAAAGTTTGTGGAACCAAAGCATATGTAGCTCAGTCGCCTTGGATTCAAAGTGGAAAGATAGAGGAGAATATCTTGTTTGGTAAAGAGATGGACAGAAGGAAGTATGATAGGGTTCTTGAGGCTTGCTCACTGAAGAAAGACCTTGAAATTCTCTCTTTTGGCGATCAGACCGTGATCGGGGAGAGAGGGATAAATTTGAGTGGCGGGCAGAAGCAAAGAATACAAATTGCACGATCTCTCTATCAAGACGCTGATATCTACTTGTTTGATGATCCGTTTAGTGCAGTTGATGCTCATACTGGTTCTCACCTCTTTAAGGAATGCTTACTCGGCCTTTTAAGTTCAAAAACAGTGATTTATATAACTCATCAAGTAGAATTTTTACCTGCGGCTGATCTTATCTTGGTAATGAAGGATGGAAAGATCACTCAAGCTGGAAAGTACAATGAAATTCTTGCTGCAGGAACTGATTTTATGGCACTCGTGGGTGCACATAAGGAAGCTCTGTCAGCACTTGATTCTGTAGATCGAGAGCCTGCTGCGAAAAACTTATCCAATACCACTGAAGATGTCAATGGTATTGTTAGAGACGAAGAAAACGGAGATATTCAAGATGGTAAAGCAGAAGGTGACGCTAAATCGGAAGGCCAGCTGGTTCAAGATGAAGAGAGAGAGAAAGGCAAAGTTGGGTTTGCAGTTTATTGGAAATATCTTACATCTTCATATGGAGGAGCTCTTGTGCCGTTTATACTACTCTCTCAGATTCTCTTTCAGATTCTTCAAATAGGAAGCAATTACTGGATGGCTTGGGCATCTCCGGTCTCCGAGGATGTGAAGCCGAATGTCGAAGGTTCTAAACTTATTATCGTTTATGTGGCCCTGGCAATTGGAAGTTCTCTTTGTGTCTTTACAAGAATAACTCTTATCGTCACTGCTGGCTATAATTCGGCGACTCTACTCTTCAACAAAATGCATCAATGCATTTTCCGAGCCCCCATGTTGTTTTTCGACTCGACGCCAAGTGGACGAATCTTGAACAGGGCTTCTACTGATCAAAGTGCAGTAGATATGGACATTCCATTTCGAGTTGGATCTTTCGCCTTCTCATTGATCCAACTTCTCGGAATTATTGCAGTAATGTCTCAGGTTGCTTGGCAGGTTTTCATTATTTTTGTCCCTGTAATTGCGCTATGTATTTGGTATCAGCAATATTATATTCCTTCGGCCAGAGAGCTGGCTCGTTTAGTTGGAGTCTGTAAAGCTCCGGTTATACAGCATTTTGCAGAAACGATTTCCGGGACATCTACCATTAGGAGCTTCAACCAAGAATCAAGATTTAGAGACTTGAATATGAAGCTGACGGATGGGTATTCTCGACCCAAGTTCAACAATGCAGGAGCAATGGAATGGCTCTGCTTTCGACTGGATATGTTATCGTCCATTACTTTCGCCTTTTCATTGATTTTCCTAATCTCCATCCCTCGAGGAATTATTGATCCCGGCATTGCTGGCTTGGCCGTGACGTATGGACTTAACCTGAATACGCTACAAGCCTGGCTAATATGGAACCTGTGTAATATGGAAAACAAAATGATATCAGTGGAGAGAATACTGCAGTATGCTTCGATCCCTAGTGAGCCACCGTTGGTTGTCGAAGAAAACCAACCAGATATCGCATGGCCATTGTGTGGAGAAGTTGAAATTCGTGATCTACAGGTTCGATATGCACCACACTTGCCACTTGTGTTGCGAGGAATCTCGTGTACTTTCCCGGGAGGTAAAAAGACTGGAATTGTCGGAAGAACAGGCAGTGGAAAATCTACTCTGATTCAGACACTTTTCCGGATAGTTGAACCAGCTGCCGGAGAAATAAAAATTGATAAAATTAACATCTCTTCAATTGGACTGCACGATTTGAGATTGAGGCTGAGCATTATTCCTCAGGATCCAACCATGTTTGAAGGGACTGTTCGAAGCAACTTGGACCCACTCGAAGAGTATACCGATGAACAAATTTGGGAGGCTCTGGATAAATGCCAACTTGGAGATGAAGTCAGGAAAAAAGAAGGAAAGCTAGATTCATCAGTCAGTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAACTCGTCTGTCTTGGCCGGGTTCTGCTGAAGAAAAGTCGGGTTTTGGTTCTCGATGAGGCTACTGCCTCGGTCGATACAGCTACCGATAATCTTATACAACAAACTCTCAGACAGCATTTTTCGAACTGCACTGTCATCGTAATTGCCCATCGAATTACTTCTGTCCTTGACGGTGACATGGTTCTTCTCCTCAATCACGGGCTCGTCGAGGAGTATGATTCGCCAACGAGATTGCTGGAGAACAATTCTTCGGGTTTTGCTCAGCTTGTATCGGAGTATACTGTTAGGTCTAATACAAGTTTAGAGAAGTTTTAG 4452 42.23 MTSLMHSGIDFILDPVFLRGLSGLLHLVLLFGLFFLWVRKLLKLYRDGSPKERLRSRGRSVDKLTFALSLCFSVFNLLFCFLNYFYWYKNGWSEENLAILLDMALRTLAWFAVSVYLYTQVGKKPPFPLRVWWGFFFSLSCYYIFIDLMRHKKQGFVPVHDIVFDVVSAISGLFFTCMGVLGKRVSDQTNLEEPLLNGHVDAINESGNFKGDQTVTPYSTAGILSILSFSWMGPLIATGNKKTLDLEDVPQLSSKDSVSVTYPTFQNKLESDCGRIDGITTFCLVKALIYSAWREILLTALLACLHTLASYVGPYLIDTFVQYLNGTQQFENEGYVLVAAFFGAKIVECLSMRHWFFRLQVVGIRMRAVLNAIIYNKALTLSGQSKQKHTSGEIINFMTVDAERVGEFSWYMHDPWMVLLQVSLALLILYKNLGVASVVTFVATVIVMLVNVPLGKLQERYQDNIMESKDNRMKATSEILRNMRILKLQGWEMKFLSKIVELRKVEAGWLKKYLYTMAMTSSLFWGAPTFISVVTFGACIFMGIPLDSGKILSALATFRILQEPIFNLPDTISMMVQTKVSLDRIVSFLRLDDLQTDIVEQLPMGSSDMAVEMADGNFSWDLSSPNSTLQDINFKVSRGMRVAICGTVGSGKSSLLSCILGEVPKISGSLKVCGTKAYVAQSPWIQSGKIEENILFGKEMDRRKYDRVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARSLYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVIYITHQVEFLPAADLILVMKDGKITQAGKYNEILAAGTDFMALVGAHKEALSALDSVDREPAAKNLSNTTEDVNGIVRDEENGDIQDGKAEGDAKSEGQLVQDEEREKGKVGFAVYWKYLTSSYGGALVPFILLSQILFQILQIGSNYWMAWASPVSEDVKPNVEGSKLIIVYVALAIGSSLCVFTRITLIVTAGYNSATLLFNKMHQCIFRAPMLFFDSTPSGRILNRASTDQSAVDMDIPFRVGSFAFSLIQLLGIIAVMSQVAWQVFIIFVPVIALCIWYQQYYIPSARELARLVGVCKAPVIQHFAETISGTSTIRSFNQESRFRDLNMKLTDGYSRPKFNNAGAMEWLCFRLDMLSSITFAFSLIFLISIPRGIIDPGIAGLAVTYGLNLNTLQAWLIWNLCNMENKMISVERILQYASIPSEPPLVVEENQPDIAWPLCGEVEIRDLQVRYAPHLPLVLRGISCTFPGGKKTGIVGRTGSGKSTLIQTLFRIVEPAAGEIKIDKINISSIGLHDLRLRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSRVLVLDEATASVDTATDNLIQQTLRQHFSNCTVIVIAHRITSVLDGDMVLLLNHGLVEEYDSPTRLLENNSSGFAQLVSEYTVRSNTSLEKF 1483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13087887 13093429 - Bpe023230.1 Bpe08g01103 107979

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01103 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 297 577 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe08g01103 1483 SMART AAA_5 1262 1445 IPR003593 -
Bpe08g01103 1483 SMART AAA_5 638 811 IPR003593 -
Bpe08g01103 1483 ProSitePatterns ABC transporters family signature. 736 750 IPR017871 GO:0005524
Bpe08g01103 1483 CDD ABC_6TM_ABCC_D2 917 1211 IPR044726 GO:0140359
Bpe08g01103 1483 Gene3D ABC transporter type 1, transmembrane domain 879 1217 IPR036640 GO:0005524|GO:0016021
Bpe08g01103 1483 Gene3D ABC transporter type 1, transmembrane domain 279 592 IPR036640 GO:0005524|GO:0016021
Bpe08g01103 1483 Gene3D - 1219 1472 IPR027417 -
Bpe08g01103 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1462 IPR027417 -
Bpe08g01103 1483 CDD ABCC_MRP_domain1 611 811 - -
Bpe08g01103 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 607 833 IPR027417 -
Bpe08g01103 1483 Pfam ABC transporter transmembrane region 920 1162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe08g01103 1483 Pfam ABC transporter transmembrane region 297 553 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe08g01103 1483 CDD ABCC_MRP_domain2 1234 1454 - -
Bpe08g01103 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 611 834 IPR003439 GO:0005524
Bpe08g01103 1483 SUPERFAMILY ABC transporter transmembrane region 287 585 IPR036640 GO:0005524|GO:0016021
Bpe08g01103 1483 SUPERFAMILY ABC transporter transmembrane region 917 1217 IPR036640 GO:0005524|GO:0016021
Bpe08g01103 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1199 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe08g01103 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1238 1470 IPR003439 GO:0005524
Bpe08g01103 1483 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 96 1482 - -
Bpe08g01103 1483 CDD ABC_6TM_ABCC_D1 298 585 IPR044746 GO:0140359
Bpe08g01103 1483 Gene3D - 593 853 IPR027417 -
Bpe08g01103 1483 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 96 1482 - -
Bpe08g01103 1483 MobiDBLite consensus disorder prediction 864 889 - -
Bpe08g01103 1483 Pfam ABC transporter 1253 1401 IPR003439 GO:0005524
Bpe08g01103 1483 Pfam ABC transporter 629 763 IPR003439 GO:0005524
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01103 - - K05666 zju:107433578 2195.24
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00358 Bpe-Chr6:15068358 Bpe08g01103 Bpe-Chr8:13087887 0 dispersed
Bpe06g00770 Bpe-Chr6:17990810 Bpe08g01103 Bpe-Chr8:13087887 0 dispersed
Bpe08g01103 Bpe-Chr8:13087887 Bpe14g00880 Bpe-Chr14:6531291 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g631 . . . . . Bpe08g01103 . . . . . . . Car09g00899 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002483 1 1 1 1 1 1 2 2 2 1 1 2 2 1 2 2 2 2 2 1 1 3 2 2 3 2 1 3 6 6 59
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe08g01103 Bpe_Chr08 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.145779 0.0 0.0 0.0