Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01106 ATGGAACCCAGGCCGGTGGTGAGAAAATTTCAGGCGAGGCCTCAACACGAAGGGGTAGGCGCCATTGTTAGAAGGAGCATAGGAAGGTTTGAGCTTAAATCCTTCGATCCTTTCCTTGTCTTGGATGAATTTTCAGTTACTGCTCCGGCTGGATTCCCTGATCATCCACATAGAGGTTCGATAATCATCGGAGCTATGGAGCATGAAGACTTCGAAGGACACAAGGGAAGAATAAGTGCGGGAGGCCTTCAATGGATGACAGCAGGCAGAGGGATTGTTCATTCTGAAACTCCCAACTCCAATGGCACCCAGTTGGGTTTACAGCTCTGGATCAATCTCTCTTCCAAACACAAAATGATTCAACCAAGATACCAAGAAATTCCAAGTAGAGAAATAGCAGAAGCATCAAAAGATGGGATCAAAGTAAGAGTAATTGCAGGATCCGCCATGGGAGTGAAATCTCCAATCTATACGAAAACTCCCACCATTTATCTCGACTTCACTCTCAAACCAGGAGCTCATCTTCTCCAGCCCGTACCCATTTCATACAACGCATTCGTCTACGTAATAGAAGGCGAAGGAGAGTTCGGAGGGTCCAGTCCAACGGCGGCGACGGCTCACCATCTTCTTCTTCTCGGCTCCGGCGACTGTTTGAAGGCCTGGAATAGGTCGTTGAAGAAGGAGCTGAGGTTTATTTTGGTGGGGGGAGAGCCGTTGAATGAGCCGGTGGTGCAGTTGGGGCCGTTCGTGATGAACAGTGAAGAGGAGATCGATGAAGCCATTAATGACTTCGAGAGTTGCAGAAATGGGTTTGAGAATGCTAAGAACTGGAGATCTTCAGCTTCCTTTGGGTTTTGA 858 48.02 MEPRPVVRKFQARPQHEGVGAIVRRSIGRFELKSFDPFLVLDEFSVTAPAGFPDHPHRGSIIIGAMEHEDFEGHKGRISAGGLQWMTAGRGIVHSETPNSNGTQLGLQLWINLSSKHKMIQPRYQEIPSREIAEASKDGIKVRVIAGSAMGVKSPIYTKTPTIYLDFTLKPGAHLLQPVPISYNAFVYVIEGEGEFGGSSPTAATAHHLLLLGSGDCLKAWNRSLKKELRFILVGGEPLNEPVVQLGPFVMNSEEEIDEAINDFESCRNGFENAKNWRSSASFGF 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13107665 13109592 - Bpe023233.1 Bpe08g01106 107982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01106 285 PANTHER PIRIN-RELATED 2 282 IPR012093 -
Bpe08g01106 285 Pfam Pirin 23 111 IPR003829 -
Bpe08g01106 285 PANTHER - 2 282 - -
Bpe08g01106 285 CDD cupin_pirin_C 161 238 - -
Bpe08g01106 285 CDD cupin_pirin_N 23 113 - -
Bpe08g01106 285 PIRSF Pirin 2 278 IPR012093 -
Bpe08g01106 285 Pfam Pirin C-terminal cupin domain 164 270 IPR008778 -
Bpe08g01106 285 SUPERFAMILY RmlC-like cupins 5 279 IPR011051 -
Bpe08g01106 285 Gene3D Jelly Rolls 17 265 IPR014710 -
Bpe08g01106 285 Gene3D Jelly Rolls 133 239 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00915 Bpe-Chr4:6111048 Bpe08g01106 Bpe-Chr8:13107665 7.75E-126 dispersed
Bpe08g01106 Bpe-Chr8:13107665 Bpe05g00988 Bpe-Chr5:22685407 9.05E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01106 K06911 - zju:107433169 439.499