Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01109 ATGGCATCCTCTTCGGATTCATGGGTGAAGGAATATAATGAAGCAGCGAAACTTGCTGATGATATCAATGGAATGATCTCTGAGCGTAGTTCGGTTTCTGTATCTGGACCAGAAGCTCAGCGTTATGCCTCCGCTATTCGCAGAAAGATCACAATATTGGGAACGAGGCTTGATAGCCTACTGGCCCTCTTGTCTAGAATTCCTGGAAAACAGGCCATCTCTGATAAAGAGATGAATCGCCGGAGGGACATGGTTTCAAATTTAAGATCAAAAGTTAACCAAATGGCCTCACAATTGAACATGTCTAACTTTGCTAATCGGGACAGCTTGCTTGGTTCAGAAATAAAAGCAGCTGACCCCATGAACAGAACAATAGGCCTGGACAACCAAGGTCTAGTTGAACAAGACGAGGACCTTCAAAAGCTGGAGGAGACCGTAATAAGTACAAAACATATTGCTTTGGCAGTCAATGAAGAACTTGACCTTCACACCAGGCTAATTGATGACTTGGATCAACATGTAGATGTCACTGACTCTCGATTGCGGCGAGTGCAGAAGAGCCTAGCAATTTTAAACAAGCGTACCAAAGGAGGTTGCTCGTGCTTGTGCATGCTTTTATCGGTTGTCGGAATCGTGATTCTGGTTGTTGTCATCTATCTTCTCGTCAGGTATTTGTAA 678 43.95 MASSSDSWVKEYNEAAKLADDINGMISERSSVSVSGPEAQRYASAIRRKITILGTRLDSLLALLSRIPGKQAISDKEMNRRRDMVSNLRSKVNQMASQLNMSNFANRDSLLGSEIKAADPMNRTIGLDNQGLVEQDEDLQKLEETVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKSLAILNKRTKGGCSCLCMLLSVVGIVILVVVIYLLVRYL 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13125614 13127320 - Bpe023236.1 Bpe08g01109 107985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01109 225 Pfam SNARE domain 166 217 IPR000727 -
Bpe08g01109 225 SUPERFAMILY t-snare proteins 21 100 IPR010989 GO:0016020|GO:0016192
Bpe08g01109 225 PANTHER SYNTAXIN-51-LIKE 1 221 - -
Bpe08g01109 225 PANTHER SYNTAXIN 1 221 IPR045242 -
Bpe08g01109 225 Gene3D - 131 193 - -
Bpe08g01109 225 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 129 191 IPR000727 -
Bpe08g01109 225 CDD SNARE_Qc 134 189 - -
Bpe08g01109 225 SUPERFAMILY SNARE fusion complex 129 190 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00767 Bpe08g01109 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01109 Bpe-Chr8:13125614 Bpe08g01119 Bpe-Chr8:13172770 4.29E-08 dispersed
Bpe03g00767 Bpe-Chr3:27690393 Bpe08g01109 Bpe-Chr8:13125614 2.57E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01109 K08503 - cit:102608030 342.428