Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01121 TACATGGTTGATATAGAAGTTCAAATTCCAACTGCTTTCGATCCATTCGCTGAAGCCAAAGATACGGATGCTCCTGGAGCAAAAGAGTATGTTCATATCCGCGTTCAGCAAAGAAACGGTAAAAAGTGCCTGACCACAGTTCAGGGGCTGAAGAAAGAGTACAGCTACGAGAAGATTCTGAAAGATGTCAAAAAAGAGTTTTGCTGCAATGGAAATGTGGTGCAGGACAAAGAATTAGGGAAGATAATTCAACTCCAAGGTGATCAGCGCAAGAACGTTTCTCAGTTTCTTGTGCAGGCTGGTCTTGCGAAGAAGGATCGTATCAAAATTCATGGTTTCTGA 342 42.4 YMVDIEVQIPTAFDPFAEAKDTDAPGAKEYVHIRVQQRNGKKCLTTVQGLKKEYSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLAKKDRIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13180832 13181173 + Bpe023247.1 Bpe08g01121 107997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01121 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Bpe08g01121 113 Pfam Translation initiation factor SUI1 28 101 IPR001950 GO:0003743|GO:0006413
Bpe08g01121 113 SUPERFAMILY eIF1-like 3 113 IPR036877 GO:0003743|GO:0006413
Bpe08g01121 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Bpe08g01121 113 PANTHER BNAA10G09260D PROTEIN 2 113 - -
Bpe08g01121 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Bpe08g01121 113 PIRSF Transl_init_SUI1_Euk 2 113 IPR005874 GO:0003743
Bpe08g01121 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 2 113 - -
Bpe08g01121 113 Gene3D - 2 113 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01121 Bpe11g00551 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01121 Bpe-Chr8:13180832 Bpe09g00189 Bpe-Chr9:1319288 2.83E-59 dispersed
Bpe11g00551 Bpe-Chr11:4222231 Bpe08g01121 Bpe-Chr8:13180832 1.45E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01121 K03113 - csv:101202908 212.616