Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01128 ATGATGAACATCTACATAGCCATCTTCATCTTCTTCGTTCCCATTCTCCTGCTACTTATGAGAAGAAAAAAATCATCCGAAAGGCTCCCTCCTGGTTCCTTCGGCATTCCTTTCTTAGGCCAAAGCCTTACTCTTCTCCATGCTATGAGAAATAACACAGCAGAACAATGGCTCCTTCAAAGGATCAGAAAGTACGGACCAGTCTCCAAGCTCAGTCTCTTCGGCAAACCAACTGTTTTCATCAGTGGACAGGCAGCAAATAAGCTTGTTTTCGGCAGTGATGATGCGTCAGCCCTTAGCAACCAACAAGTCAAGTCCATTACAATGATTCTGGGTGACCGGAATTTGTTGGATCTCACCGGCGATGACCATAAACGAGTAAGAGACACTCTCCTTTCCTTCTTGAAACCCAATTCGCTGAAGAAATATGTCGGGAGAATTGACGAAGAAGTCAAGGAGCACCTCATGATCCATTGGCAAGGGAAGAATGAAGTCTCTGTACTACCCTTGATGAAAACTCTCACATTCAACGTGATATGCTCTGTCCTATTCGGCATCGAGAAAGGTATCGTAAGAGAGAAATACATGGAGTGTTTTCAAGCAATGGTAGAAGGAATGTGGTCCATTCCGATTAACTTGCCGTTTACTCGCTACAACCGGAGCCTGCAGGCAACCATGAAGGTCCAATGCATGTTAAAGGGTCTTATGCAGGAGAAGAAAGTAAGACTTGAAGAAGATGTTGATTTTAAACAGCAAGACCTCATCACTTACTTGCTCAGAATTCAAAAGGAAAGTGACAAAGAATTATTGAGTGAGACTGAAACCGTGCACAACGCCATAATCGTCATGATTGCAGGCTATGACACTACAGCTGTTCTGCTTACTTTCATGATGAAGCTTTTGGCTAAAGATCAACCAGTTTATACAGCTGTTCTTCAAGAACATGAAGAGATAGAAAAGAGCAAGCTACCTGGAGAGTCATTGACATGGGAAGATCTCAACAAGATGAAGTACACATGGAAAGTAGCTCTTGAAACGTTGAGGGTCGTCCCTCCGGTTTTTGGCGGATTCAGACAAGTCTTGAAAGATGTCGAATTCAATGGATATCTTATTCCTAAAGGATGGCAAATTTTCTGGGCCGCGCCGATGACACACATGGACGAGAGCATATTTCCTGAGCCATTGAAGTTTGATCCGAGTAGATTTGATAACGAAGCTTTGGTTCCTCGATTTTGCTTTGCACCGTTTGGGGGAGGTCCGAGAATCTGTCCAGGCAATGAGTTTGCAAGGATAGAGACTCTTGTTGCCATCCATTACATCATAACTCACTTCACCTGGAAGTTATCTGCTGATGATCTTTTCATCAGAGATCCCATGCCAGTCCCAACTAGAGGATTACCTATTCAAATTACACAAAGGAAACCATTGCAGTTTAATCGAGAAATGTAG 1449 43.27 MMNIYIAIFIFFVPILLLLMRRKKSSERLPPGSFGIPFLGQSLTLLHAMRNNTAEQWLLQRIRKYGPVSKLSLFGKPTVFISGQAANKLVFGSDDASALSNQQVKSITMILGDRNLLDLTGDDHKRVRDTLLSFLKPNSLKKYVGRIDEEVKEHLMIHWQGKNEVSVLPLMKTLTFNVICSVLFGIEKGIVREKYMECFQAMVEGMWSIPINLPFTRYNRSLQATMKVQCMLKGLMQEKKVRLEEDVDFKQQDLITYLLRIQKESDKELLSETETVHNAIIVMIAGYDTTAVLLTFMMKLLAKDQPVYTAVLQEHEEIEKSKLPGESLTWEDLNKMKYTWKVALETLRVVPPVFGGFRQVLKDVEFNGYLIPKGWQIFWAAPMTHMDESIFPEPLKFDPSRFDNEALVPRFCFAPFGGGPRICPGNEFARIETLVAIHYIITHFTWKLSADDLFIRDPMPVPTRGLPIQITQRKPLQFNREM 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13204816 13206537 + Bpe023254.1 Bpe08g01128 108004

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01128 482 Gene3D Cytochrome P450 19 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PANTHER CYTOCHROME P450 26 8 474 - -
Bpe08g01128 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Bpe08g01128 482 Pfam Cytochrome P450 30 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PANTHER OS07G0520300 PROTEIN 8 474 - -
Bpe08g01128 482 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g01128 482 SUPERFAMILY Cytochrome P450 24 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01128 - - - tcc:18593563 654.825
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01128 Bpe-Chr8:13204816 Bpe09g00066 Bpe-Chr9:463300 1.32E-114 dispersed
Bpe11g00542 Bpe-Chr11:4164955 Bpe08g01128 Bpe-Chr8:13204816 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g493 Blo03g00567 . Bda07g00356 . . Bpe08g01128 . . . . . . . . . . . Bhi09g01888 . . . . . . . . . . . . . . . . . Lsi04g01209 . . . . . . . . . Bma07g01302 . . . . . . . . . . . . . . . . . Cla05g01495 Cam05g1612 . Cco05g1641 Clacu05g1593 Cmu05g1495 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe08g01128 Bpe_Chr08 FPKM 2.647577 3.589972 16.643866 14.504885 13.912544 14.951844 11.484489 2.09667 2.238756 2.959654