Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01163 ATGATGATGATTTTTGAGGAGATGGGGTTTTGTGGTGATTTGGATTTTCTGTCTGCATCTCCAGAGGGAGATCTGGTCGCACCACTAACTGAACACGAAGCTACTGTGGAAGATAATTATTCAGATGAAGAAACAGATGTTGATGAGCTCGAGAGGAGGATATGGAGGGACAAAATGCGTATAAAACGACGGAAAGAGCAGAGTAAAGGAAAGGAAGGTATCGACATGGCCAAACAGCGCCAATCTCAAGAACAAGCGAGGAGAAAGAAGATGTCTAGGGCCCAAGACGGGATCCTGAAATACATGTTGAAGATGATGGAGGTTTGCAAAGCTCAAGGCTTCGTCTATGGGATTATTCCGGAAAAGGGGAAACCCGTCACGGGGGCGTCGGATAATCTTCGAGAATGGTGGAAGGATAAAGTCAGATTCGATCGAAATGGGCCGGCAGCCATAGCCAAGTACCAAGCCGACAATGCAATTCCATGCAAAAAGGAAGGCTCCAACTTGATTGGTCCGACCCCCCATACCTTGCAAGAGCTTCAAGACACTACCTTAGGATCTCTTTTATCAGCACTAATGCAGCATTGTGACCCTCCGCAGAGGCGGTTTCCGTTGGAGAAAGGTGTTCCTCCGCCATGGTGGCCCACCGGAACAGAGGAATGGTGGCCCCAACTCGGTCTGCAGAAAGATCAAGGCCCTCCGCCTTACAAGAAGCCTCACGATTTGAAGAAAGCGTGGAAAGTTGGGGTTCTCACTGCAGTAATCAAACATATGTCTCCTGATATTGCTAAAATTAGAAAGCTTGTGAGACAGTCCAAGTGTTTGCAGGACAAGATGACTGCCAAAGAGAGTGCCACTTGGCTTGCCATTATCAACCAGGAGGAGGCCTTGGCCCGAGAGCTCTACCCCGACTCTTGCCCACCACTGTCATCTGCCGGTGGAAGTGGGTCGTTGGTCATCGACAATTGTGCTGAATACGATGTAGAAGGAGCAAACGACGAGGGAAACTTTGATGTACAAGATTGTAAACTGGAGAATTTCAGTTCTATAAGTTTAGGATTGGAAAGAACTCGAGAAAGGTTGCCAAATCGACATTCCCCCTATCCAATCAAAGGAGAAGTCGTTACAAACTTGGATTTTGCGAGGAAGAGAAAGCCATCTACTGATTTAAACACAATGACCGATCAGAAAATCTACACCTGCGAGTTTGTTCAATGTCCTTACAGCGAATTTCGGCTCGGCTTTCCGGACAGGACCTCTAGGGACAATCATCAATTGTCTTGCCCATATAAGACTTCTGATTTTGGGAGCTCAAATTTTCAATTCAATGAAGTGAAGCCAGTTATCTTCCAACAATCTTTTGTCCAATCCAAGCCACCCCCTCCGGCATTCGACTTATCCGGGCTCGGAGTTCCAGAAGACGGCCAGAAGCTGATAAGTGAACTCATGTCAATTTACGATACTAGTGTTCAAGGCAGTAAAAATTCAAATACGGGTCCAGATTTGCTGATAGATAATCAAACCGTGTCTCATTCTCAGCCGAAGATTCTTCATCAACGAAACAATTTCTTCACGAATCAAAGCAATTTCTACCAAGAAGCCAATTTTTCAAGTAATCGTCAGATGATTTCTCGAGAAGACACAGGCCAATTCAATCCATTCAAACCTTTGAATTCTTCGTTCGAGACCAGCAATAGCAGCAATAACTTTCAGCTGATGTTCGAGTCTCCGTTTGAGTTGCCATCGTTCAATTACAAAGACGATGCAGGAGGGGTGGCGGACGATCCGCCCTCAAAGCACCAAGATATTTCAATCTGGTACCAGTAA 1827 45.87 MMMIFEEMGFCGDLDFLSASPEGDLVAPLTEHEATVEDNYSDEETDVDELERRIWRDKMRIKRRKEQSKGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPCKKEGSNLIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGTEEWWPQLGLQKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDSCPPLSSAGGSGSLVIDNCAEYDVEGANDEGNFDVQDCKLENFSSISLGLERTRERLPNRHSPYPIKGEVVTNLDFARKRKPSTDLNTMTDQKIYTCEFVQCPYSEFRLGFPDRTSRDNHQLSCPYKTSDFGSSNFQFNEVKPVIFQQSFVQSKPPPPAFDLSGLGVPEDGQKLISELMSIYDTSVQGSKNSNTGPDLLIDNQTVSHSQPKILHQRNNFFTNQSNFYQEANFSSNRQMISREDTGQFNPFKPLNSSFETSNSSNNFQLMFESPFELPSFNYKDDAGGVADDPPSKHQDISIWYQ 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13394047 13395873 + Bpe023288.1 Bpe08g01163 108039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01163 608 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Bpe08g01163 608 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 607 IPR006957 GO:0005634
Bpe08g01163 608 Coils Coil 33 53 - -
Bpe08g01163 608 MobiDBLite consensus disorder prediction 587 608 - -
Bpe08g01163 608 Gene3D - 80 164 IPR023278 GO:0003700|GO:0005634
Bpe08g01163 608 MobiDBLite consensus disorder prediction 62 91 - -
Bpe08g01163 608 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 607 - -
Bpe08g01163 608 MobiDBLite consensus disorder prediction 66 91 - -
Bpe08g01163 608 Pfam Ethylene insensitive 3 48 295 IPR006957 GO:0005634
Bpe08g01163 608 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01634 Bpe-Chr4:22552675 Bpe08g01163 Bpe-Chr8:13394047 1.05E-40 dispersed
Bpe11g00907 Bpe-Chr11:6724451 Bpe08g01163 Bpe-Chr8:13394047 8.18E-129 transposed
Bpe11g00969 Bpe-Chr11:7213564 Bpe08g01163 Bpe-Chr8:13394047 3.30E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21802 PF04873 EIN3 1.10E-128 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01163 K14514 - qsu:111991923 921.383