Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01190 ATGTCCGGGGAATCTTCCGATCCGAACTCGAGCAGTTCGATTTCTCCGTCCGGTTCTCCCACCTCTGCTGACTTCAACACAGATCAGCTTCCTTTCACTAGCCACACATCCAACAACTACGACGACGAAGAGGAGGCGGCGGTCGATCCTAATATTATTCTTGATGAGCCAAATGATGCTGAAGAAGAAGCCGAGGAGGACGGAGAGGATCTCTACAACGATAATTTTATGGACGATTACCGGAGGATGGAGGAACATGACCAATATGAATCCTTGGGTCTCAATGACTCTTTGGAAGACGAGAGAGATTTGGATCAAATTATGGAAGATCGAAGGGCTGCTGAATTGGAGCTCGACACACGAGATGGTCGCTCCACCCAGCGCAAACTGCCACAGCTACTTCATGATAATGACTCTGAGGATGACAACTCTAGGCCGCCAAAGAGAGCTAGAGCTTCTAGGCCTTCAGCTGCAGCAAGAAGTTACGATGATGTTGATGGAATGCGAAGTTCACCTGGAAGGTCACAGCAAGATCATTCTAGAGACGATATCCCCATGACTGATCATTCAATTGATGAACAGTATGAGGATGAAGATGACGATGAAGGTGAGTTTGAAATGTATAGGGTCCAAGGAACTCTAAGAGAGTGGGTAACTAGGGATGAAGTTCGTCGCTTCATTAGCAAGAAATTCAAAAATTTCTTAGAAACATATGTGAATCCAAAAAATGAACATTCTGAGCTTGTATACATGCGGCTCATAAATGAGATGGTGTTGGCTAACAGTAGTAGCTTGGAGGTAGATTATAAGCAGTTTATTTATGTACATCCAAATATTGCCATCTGGTTGGCTGATGCCCCGCAATCTGTTCTAGAAGTCATGGAAGAAGTTGCAATGAAGGTAGTATTTGACATACATCCTAATTACAAGAGTATTCACCAGAAGATCTATGTGAGGATAACCAACTTACCTGTATATGATCAGATTCGAAACATTAGGCAAATCCACTTGAATACCATGATTCGTATTGGAGGGGTCGTGACTCGCCGATCTGGTGTTTTTCCCCAGCTGCAGCAGGTCAAATATGATTGCAACAAATGTGGGGCAATATTAGGGCCCTTTTTCCAGAATTCATATTCAGAAGTGAAGGTTGGCTCTTGCCCTGAATGCCAATCAAAAGGGCCATTCACTGTTAATGTTGAACAGACTTTATACAGGAACTACCAGAAGCTTACGCTGCAAGAAAGCCCTGGTATTGTTCCTGCAGGTCGTCTTCCAAGATACAAGGAAGTGATATTGTTGAATGATCTGATTGATTGTGCCCGCCCTGGGGAAGAAATTGAAGTCACAGGAATTTATACAAATAACTTTGATTTATCTTTAAATACAAAGAATGGATTTCCTGTCTTTGCTACTGTTGTTGAAGCAAACTACGTTACCAAGAAGCAAGACCTCTTCTCTGCTTACAAACTTACTCAGGAAGACAAAGAAGAGATTGAAAAGCTTGCTAAAGATCCAAGAATTGGAGAAAGGATTATCAAATCTATTGCTCCATCAATATATGGCCATGAGGATATCAAAACGGCCATAGCTCTTTCTATGTTCGGTGGTCAAGAGAAGAATGTTGAAGGGAAACATCGGTTAAGAGGTGACATCAATGTACTTCTTCTTGGAGATCCAGGAACCGCGAAGTCACAATTTCTAAAATATGTTGAAAAGACTGGTCAAAGAGCAGTGTACACGACAGGCAAAGGAGCTTCTGCTGTTGGACTCACAGCAGCTGTGCACAAGGACCCAGTTACAAGGGAATGGACCCTTGAAGGAGGTGCCCTTGTTTTGGCTGATAAAGGAATTTGTCTTATTGACGAGTTTGACAAGATGAATGATCAAGATCGGGTGAGTATCCATGAAGCAATGGAGCAGCAAAGCATTAGTATATCGAAGGCTGGGATAGTCACTTCTCTTCAGGCCCGTTGTGCTGTCATTGCTGCAGCTAATCCCATTGGAGGAAGATGGATTCTTGCACTTATTTTCAGGTACGATTCCTCAAAAACATTGACCCAGAATGTTGAGCTGACTGATCCTATCATTTCTCGTTTTGACATCCTATGTGTAGTGAAGGATGTTGTAGATCCTGTTGTAGACGAGATGCTTGCCAAGTTTGTTGTTGATAGTCATTTTAAATCACAGCCGAAGGGTTCTAATGTTGAAGATAAGTCCAATATTGAGGAGTCTCAGGATGACATTCAAGACTCTGATAGGCCAGTTGATGTTGAGGTGCTGCCCCAGGATGTGCTTAGAAAATATATAACTTATGCAAAGTTAAATATTTTTCCAAGGTTGCATGATGCTGATATGGATAAGCTCACACACGTTTATGCTGAGCTGCGGCGCGAATCATCTCACGGACAAGGAGTTCCAATTGCAGTGAGACACATAGAATCAATGATACGGATGTCCGAGGCGCATGCAAGAATGCACCTCAGGCAGCATGTTACACAAGAAGATGTGGATATGGCAATTCGAGTACTTCTTGATTCATTCATTTCAACACAAAAATTTGGGGTTCAGAAAGCACTGCAAAAGAGCTTCAGAAAGTATATGACTTTCAAAAAGGATTACAATGAACTACTCCTGCATCTCCTTCGTGAGCTCGTGAAGAATGCATTGCACTCGAAGGAAATAGTTTCTGGTTCTGTTGCCGGACTTACCCATATTGATGTGAAAGTAGAGGATTTGCAAACCAAGGCACAGGAACACGAAATATATGATCTTAATCCTTTTTTCTCAAGTACTCATTTTTCACGAGCCAACTTTACGTTGAACGAAGAACAGGGAGTAATTTACCATCGACTTGCAAGATAA 2865 42.37 MSGESSDPNSSSSISPSGSPTSADFNTDQLPFTSHTSNNYDDEEEAAVDPNIILDEPNDAEEEAEEDGEDLYNDNFMDDYRRMEEHDQYESLGLNDSLEDERDLDQIMEDRRAAELELDTRDGRSTQRKLPQLLHDNDSEDDNSRPPKRARASRPSAAARSYDDVDGMRSSPGRSQQDHSRDDIPMTDHSIDEQYEDEDDDEGEFEMYRVQGTLREWVTRDEVRRFISKKFKNFLETYVNPKNEHSELVYMRLINEMVLANSSSLEVDYKQFIYVHPNIAIWLADAPQSVLEVMEEVAMKVVFDIHPNYKSIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGAILGPFFQNSYSEVKVGSCPECQSKGPFTVNVEQTLYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTQEDKEEIEKLAKDPRIGERIIKSIAPSIYGHEDIKTAIALSMFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADKGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCAVIAAANPIGGRWILALIFRYDSSKTLTQNVELTDPIISRFDILCVVKDVVDPVVDEMLAKFVVDSHFKSQPKGSNVEDKSNIEESQDDIQDSDRPVDVEVLPQDVLRKYITYAKLNIFPRLHDADMDKLTHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNELLLHLLRELVKNALHSKEIVSGSVAGLTHIDVKVEDLQTKAQEHEIYDLNPFFSSTHFSRANFTLNEEQGVIYHRLAR 954
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 13594349 13599635 + Bpe023316.1 Bpe08g01190 108066
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01190 954 SUPERFAMILY Nucleic acid-binding proteins 230 477 IPR012340 -
Bpe08g01190 954 MobiDBLite consensus disorder prediction 1 37 - -
Bpe08g01190 954 Gene3D - 356 406 - -
Bpe08g01190 954 MobiDBLite consensus disorder prediction 175 191 - -
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein family signature 661 673 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein family signature 637 650 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein family signature 549 564 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein family signature 609 623 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 338 355 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 396 410 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 457 468 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 472 483 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bpe08g01190 954 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 361 373 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bpe08g01190 954 Pfam MCM OB domain 328 455 IPR033762 -
Bpe08g01190 954 SMART mcm 325 849 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe08g01190 954 CDD MCM2 511 847 - -
Bpe08g01190 954 Pfam MCM AAA-lid domain 765 848 IPR041562 -
Bpe08g01190 954 ProSiteProfiles MCM family domain profile. 508 722 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe08g01190 954 MobiDBLite consensus disorder prediction 1 202 - -
Bpe08g01190 954 MobiDBLite consensus disorder prediction 43 73 - -
Bpe08g01190 954 Pfam Mini-chromosome maintenance protein 2 43 200 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Bpe08g01190 954 ProSitePatterns MCM family signature. 617 625 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bpe08g01190 954 Pfam MCM P-loop domain 496 726 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe08g01190 954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 518 851 IPR027417 -
Bpe08g01190 954 MobiDBLite consensus disorder prediction 731 754 - -
Bpe08g01190 954 PANTHER DNA HELICASE 146 948 - -
Bpe08g01190 954 Gene3D - 488 871 IPR027417 -
Bpe08g01190 954 MobiDBLite consensus disorder prediction 74 149 - -
Bpe08g01190 954 Gene3D - 329 454 IPR012340 -
Bpe08g01190 954 MobiDBLite consensus disorder prediction 729 754 - -
Bpe08g01190 954 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 146 948 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe08g01190 954 Pfam MCM N-terminal domain 229 322 IPR027925 -
Bpe08g01190 954 Gene3D - 221 325 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01190 Bpe-Chr8:13594349 Bpe02g02150 Bpe-Chr2:22802576 4.16E-96 dispersed
Bpe08g01190 Bpe-Chr8:13594349 Bpe15g00852 Bpe-Chr15:18514200 1.42E-97 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01190 K02540 - vvi:100266163 1559.27