Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g01222 | ATGGGTTCCATGAATACAAATAATTGGCTTTCCTTCCCACTTTCACCAACTCACTCTTCTTTACCAATCCACCTCCAAGCTACTCAGCCCCATCAGTTCTCTCTAGGGCTAGTGAATGATTCAATGGAAAACCCATTTAACACCCAAGATTGGAACTTGATTACTAACCAAGGAGGAAATGAAGTTCCAAAGGTGGCTGATTTTCTTGGGGTTACCAAATCAGAAAATCAATCAGATCTAGCGGTTTATAATGAGATCCAGTCAAATGATTCAGACTATCTATATCCAAACAACAGCATAGTTCCTCTTCAAAACACCATGGCTGATTTCCAAGAAAGCTCTAGCCATTTGCAGTCCTTGACTTTGTCAATGGGGAGTGGAAATAAGGGTTCGGCAGCATGTGAAAATAGCGAAAACAGCACAAACAGCATTGTTGAGGCAACTCCGAGAAGAACTTTGGAGACTTTCGGGCAAAGAACTTCAATTTATCGCGGGGTTACAAGGCATAGATGGACTGGAAGATATGAAGCTCATCTTTGGGATAATAGTTGTAGAAGGGAAGGACAATCAAGAAAGGGTCGTCAAGGTGGGTATGACAAAGAAGATAAAGCAGCCAGAGCTTATGATCTTGCTGCGCTGAAATATTGGGGAACGTCAACGACCACCAATTTCCCAGTGAACAATTATGAAAAAGAAGTGGAAGAGATGAAGCACATGACGAGACAAGAATTTGTAGCCTCCATTAGAAGGAAGAGTAGTGGCTTTTCTAGAGGTGCATCCATCATGTTCATCTGTGTTAACAGGCATCATCAGCATGGAAGATGGCAGGCGAGAATAGGAAGAGTTGCTGGAAACAAAGATCTTTACTTGGGAACGTTCAGTACCGAGGAAGAAGCTGCAGAAGCATATGATATTGCAGCCATAAAATTTCGAGGCCTAAATGCAGTGACGAACTTCGACATGAATCGGTACGACGTGAAGAGTATCTTGGAAAGCAATACTCTCCCCATCGGAGGAGGAGCAGCCAAAAGATTGAAGGAAGCTCAGGCCTTTGAATCAACTAGAAAACGTGAAGAAATGATTGCATTAGGTTCAAGCTTTAGCTATGGCGCCGCCGGTGGATCTTCAACTAGACTTCCTCTTCAATCTTACCCTCTTCTTCAGCAATCTTTTGAGCATTCTCAGCCCTTGATTTCTCTGCAAAATCAAGAAATCTCTCATTTTTCTCAAGACCCATCGTCGCTGCAGCAGAGTTATCTTCATCAGCTTCACTTTCATCATCAGAACTCTGGTTTTTATGCAAATCCATTTGGCCAAAGCTCTCAATTCTTCAATGGGTATGTTCAGAATAATCACCCGGGTTTACTTCACGGTTCTGGATCATCTTCGTCTGTAATCATGGACGATAATAACTATGGCGGAGGAATATATAATCTCGGAAATGGAGTGCCACTGGCGTCGGTTTCTTCCTCTAATGGCGGTGGAGGGAGATCTGCAGAAGAACTGGCTCTTGTTAAGGTGGATTATGATATGGTTCCTGGAGGCTATGGAGGTTGGTCCACTGATCATCAGGCTAGCAATGGAGTTTTCTCAATGTGGAATGATGGCTGA | 1611 | 43.2 | MGSMNTNNWLSFPLSPTHSSLPIHLQATQPHQFSLGLVNDSMENPFNTQDWNLITNQGGNEVPKVADFLGVTKSENQSDLAVYNEIQSNDSDYLYPNNSIVPLQNTMADFQESSSHLQSLTLSMGSGNKGSAACENSENSTNSIVEATPRRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGTSTTTNFPVNNYEKEVEEMKHMTRQEFVASIRRKSSGFSRGASIMFICVNRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQAFESTRKREEMIALGSSFSYGAAGGSSTRLPLQSYPLLQQSFEHSQPLISLQNQEISHFSQDPSSLQQSYLHQLHFHHQNSGFYANPFGQSSQFFNGYVQNNHPGLLHGSGSSSSVIMDDNNYGGGIYNLGNGVPLASVSSSNGGGGRSAEELALVKVDYDMVPGGYGGWSTDHQASNGVFSMWNDG | 536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 13820585 | 13823039 | + | Bpe023346.1 | Bpe08g01222 | 108098 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g01222 | 536 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 8 | 534 | - | - | |
Bpe08g01222 | 536 | CDD | AP2 | 161 | 227 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | Gene3D | AP2/ERF domain | 262 | 322 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | Gene3D | AP2/ERF domain | 162 | 227 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | SUPERFAMILY | DNA-binding domain | 161 | 227 | IPR016177 | GO:0003677 | |
Bpe08g01222 | 536 | ProSiteProfiles | AP2/ERF domain profile. | 255 | 320 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | Pfam | AP2 domain | 264 | 312 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | Pfam | AP2 domain | 162 | 217 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 | 8 | 534 | - | - | |
Bpe08g01222 | 536 | SUPERFAMILY | DNA-binding domain | 268 | 321 | IPR016177 | GO:0003677 | |
Bpe08g01222 | 536 | CDD | AP2 | 268 | 320 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | SMART | rav1_2 | 162 | 231 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | SMART | rav1_2 | 266 | 326 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | PRINTS | Ethylene responsive element binding protein signature | 163 | 174 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | PRINTS | Ethylene responsive element binding protein signature | 302 | 322 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe08g01222 | 536 | ProSiteProfiles | AP2/ERF domain profile. | 162 | 225 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe08g01222 | Bpe11g00910 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g01222 | Bpe-Chr8:13820585 | Bpe15g00266 | Bpe-Chr15:14018552 | 2.44E-84 | dispersed | |
Bpe08g00699 | Bpe-Chr8:8144067 | Bpe08g01222 | Bpe-Chr8:13820585 | 2.82E-09 | transposed | |
Bpe11g01266 | Bpe-Chr11:9463537 | Bpe08g01222 | Bpe-Chr8:13820585 | 3.16E-128 | transposed | |
Bpe11g00910 | Bpe-Chr11:6744803 | Bpe08g01222 | Bpe-Chr8:13820585 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21806 | PF00847 | AP2 | 1.60E-08 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g01222 | K09285 | - | pop:7478340 | 738.799 |