Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01293 ATGGCTCTGATTCCATGGCCGCATTTCCTTCAAGTTCCAGTTCACTCGATCTATCCATCGTCTCACTGTCTACTTTACGCAGACGCTGTCTCCGTATCAAGCTTTTTTTCTCAATATGCATGTCTTCCTTCTCTGACTGCCGCGCGAGGCGGTGTCTCGTTGGTCCCGACTGTAGTGAAGGCCTCGTCCAGAGTGAAACGTTTCGCTAAGTCCACAGAGGAGGAGAAGTTGAGTGGATCGGAAATTCTAGCTCCCGAAGTTGGCGGAAGGAGTGAGCTTGACGATGAGAGTACCGCTCCATATCAAAGTTCGGAATCCGTTACTCTTCCTGCGCAGAGGATTCTTCCGTCATCGTCGAGTGATTCACTTTTGCTTGGGATTCGAGAGCCGGTTTATGAGGTGGTAGAAGTGAAATCAAATGGATCGGTATCCACTCAAAAGATTAACAGGCGTCAGTTGTTGAAGTTGAGTGGTCTTCGCCCGCGTGATATCCGGAGTGTAGATCCTTCTTTGTTTTTGACAAACTCGATGCCTTCATTGTTGGTTCGTGAGAATGCTATTTTGCTTAATCTGGGATCTTTGCGAGCGATAGCAATGAAGGAGTGTGTCCTCATATTTGACTATAACCGTAAAGGAGGGCAAGCTTTTATTGAGTCACTATTGCCTCGGTTGAACCCAAAAAGCATGAATGGGGGCCCATCAATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTGTCACGAACACAGAGGTTAGAGCAGAGACTAATGAATGTAGAACCTCGTGTTCAAGCTCTACTTGAGGTTTTGCCTACCAAATTAACTGCTGATGTATTGGAACAACTTCGCATTAGCAAGCAGACCTTGGTTGAACTGGGATCCAGAGCAGGGGCACTCAGACAAATGTTGCTTGATCTTTTGGAGGATCCTTATGAAATACGTCGCATTTGCATCATGGGGAGAAACTGTGTATTGAAGAAAGGAAGTGAAGACGTTGAGTGTTCTGTCCCTCTAGAAAAACAAATTGCTGACGAAGAAGAGGAAGAAATTGAGATGCTTCTGGAAAATTATCTTCAAAGATGCGAATCTTGTCATGGTCAGGCTGAAAGACTTCTGGACTCTGCAAAAGAAATGGAAGATTCTATTGCTGTCAATTTGAGCTCAAGGAGGTTGGAGGTCAGCAAAGTCGAACTACTTCTTCAAGTAGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGGATCTTTGGCATGAACTTAAGGTCATATCTTGAGGAGCATGTGATTGCCTTTTGGACTACTACAGCAGGGATCATAGTTGGTGGTATTGTGGCATTTTTACTCATGTATTATTACCTCAGGGCGAGAAGGATATTATAA 1386 44.88 MALIPWPHFLQVPVHSIYPSSHCLLYADAVSVSSFFSQYACLPSLTAARGGVSLVPTVVKASSRVKRFAKSTEEEKLSGSEILAPEVGGRSELDDESTAPYQSSESVTLPAQRILPSSSSDSLLLGIREPVYEVVEVKSNGSVSTQKINRRQLLKLSGLRPRDIRSVDPSLFLTNSMPSLLVRENAILLNLGSLRAIAMKECVLIFDYNRKGGQAFIESLLPRLNPKSMNGGPSMPFELEVVEAALLSRTQRLEQRLMNVEPRVQALLEVLPTKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPYEIRRICIMGRNCVLKKGSEDVECSVPLEKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSKVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVIAFWTTTAGIIVGGIVAFLLMYYYLRARRIL 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14280865 14285307 + Bpe023413.1 Bpe08g01293 108169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01293 461 Gene3D - 127 208 - -
Bpe08g01293 461 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 43 461 - -
Bpe08g01293 461 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 43 461 IPR039204 -
Bpe08g01293 461 Coils Coil 341 361 - -
Bpe08g01293 461 CDD Mrs2_Mfm1p-like 134 460 IPR039204 -
Bpe08g01293 461 Gene3D Magnesium transport protein CorA, transmembrane region 209 392 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01293 Bpe-Chr8:14280865 Bpe13g01373 Bpe-Chr13:18972938 4.44E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01293 K16075 - csv:101219314 612.838