Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01297 ATGGGTCAAATTCAGTATTCGGATAAGTACTTTGATGACACAAATGAATACAGGCATGTTGTGCTTCCGCCTGAGGTAGCGAAGTTGCTCCCCAAGAATCGTCTTCTTACTGAAAATGAATGGCGAGCAATCGGGGTTCAACAGAGCCGTGGGTGGGTACACTACGCGATACATCGTCCAGAGCCACACATCATGTTATTCAGGAGGCCATTGAACTATCAACAACAGCAGGAGAATCAGTCTCAGCAAGCTAAGTGA 258 46.51 MGQIQYSDKYFDDTNEYRHVVLPPEVAKLLPKNRLLTENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQSQQAK 85
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14310471 14311204 + Bpe023417.1 Bpe08g01297 108173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01297 85 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Bpe08g01297 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 84 - -
Bpe08g01297 85 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 84 - -
Bpe08g01297 85 SMART CKS_2 3 72 IPR000789 GO:0016538
Bpe08g01297 85 Gene3D - 1 84 IPR036858 GO:0016538
Bpe08g01297 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Bpe08g01297 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Bpe08g01297 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Bpe08g01297 85 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Bpe08g01297 85 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01297 Bpe08g00184 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00184 Bpe-Chr8:1009309 Bpe08g01297 Bpe-Chr8:14310471 2.06E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01297 K02219 - dcr:108218560 156.377