Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01298 ATGATTTCAGAGGTAGAGTCATCCTTCCCGAGAGCATCTCTCCATTACAGTCTCTCCATTCTCAAAGAAAAGGTTCATCAGGTTGAATCAGTGATTACTCTCTTTATCTTTCAAGATCAAACCCACTACGATTCATCGTCTCTGCCAATCTCCACCATAAACTCGCTGATTCAAGAAATCGTCTTCACTGCGTCTTCCATGCTGGTAACTTTTCAGCAAACGCCTCCTGCTGGTTCAAACCCTCGTAATATGATCGACCCCGATGAATTCCCCCATCATCGCCGTTTTTCCTCTCACCGGACCTCCGACGGTAGCCATGGTCAAGAATTCAATCCTAGCGAGACGACGTCGCTTGATTGGTATGTACCAGAAAGCTTCAACAATGGCGGGACATCAAATAATTGTCAGAATTTCGAAAAAAAGAAAGAAGAGAATCAAAATCGCTCTCCTAAGCATTACGATATAATAGAATTACAGGCTGCAGACTTGTTAGCTAAGTACACCCATCACTGCCAAGTCTGTGGAAAAGGGTTCAAACGAGATGCAAATTTGAGAATGCACATGAGGGCCCATGGCGACGAGTATAAAACCAGTGCATCTTTACGCAACCCAATGAAAAACGACGAAAGTTGGAAGAAGAGAGAGGATTTTCCGGGAAAGTTACCGAGAAAATGGGCGTACTCATGTCCGCAGGAAGGTTGCCGGTGGAATCGAAAGCACGCCAAGTTTCAGCCTCTGAAGTCGATGATTTGCGTGAAGAATCATTACAAAAGAAGCCACTGCCCTAAAATGTACATATGCAAGAGGTGCAACCAGAAGCAATTTTCAGTTCTGTCTGATTTGAAAACCCATGAGAAACACTGCGGAGATCTGAAATGGCAGTGTTCTTGCGGAACTACGTTTTCCAGAAAAGATAAGTTAATGGGTCATGTTGCTTTGTTTGTGGGTCATTCGCCATTGACGAGTTCTGTGATGAAGCAGAGAAAGTCTGAGAGCCAAACTGTAGATTACAGCTGGGTTGTGTAA 1026 44.15 MISEVESSFPRASLHYSLSILKEKVHQVESVITLFIFQDQTHYDSSSLPISTINSLIQEIVFTASSMLVTFQQTPPAGSNPRNMIDPDEFPHHRRFSSHRTSDGSHGQEFNPSETTSLDWYVPESFNNGGTSNNCQNFEKKKEENQNRSPKHYDIIELQAADLLAKYTHHCQVCGKGFKRDANLRMHMRAHGDEYKTSASLRNPMKNDESWKKREDFPGKLPRKWAYSCPQEGCRWNRKHAKFQPLKSMICVKNHYKRSHCPKMYICKRCNQKQFSVLSDLKTHEKHCGDLKWQCSCGTTFSRKDKLMGHVALFVGHSPLTSSVMKQRKSESQTVDYSWVV 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14312392 14313417 - Bpe023418.1 Bpe08g01298 108174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01298 341 MobiDBLite consensus disorder prediction 89 114 - -
Bpe08g01298 341 MobiDBLite consensus disorder prediction 137 151 - -
Bpe08g01298 341 Gene3D Classic Zinc Finger 263 313 - -
Bpe08g01298 341 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 196 IPR013087 -
Bpe08g01298 341 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 9 333 IPR044300 GO:0010044|GO:0010447
Bpe08g01298 341 MobiDBLite consensus disorder prediction 130 151 - -
Bpe08g01298 341 SUPERFAMILY beta-beta-alpha zinc fingers 167 194 IPR036236 -
Bpe08g01298 341 PANTHER OS08G0562300 PROTEIN 9 333 - -
Bpe08g01298 341 ProSitePatterns Zinc finger C2H2 type domain signature. 171 191 IPR013087 -
Bpe08g01298 341 SMART c2h2final6 169 191 IPR013087 -
Bpe08g01298 341 SMART c2h2final6 227 260 IPR013087 -
Bpe08g01298 341 SMART c2h2final6 265 287 IPR013087 -
Bpe08g01298 341 Gene3D Classic Zinc Finger 151 220 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01298 Bpe11g00832 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01298 Bpe-Chr8:14312392 Bpe10g00553 Bpe-Chr10:12575854 6.94E-26 dispersed
Bpe02g00184 Bpe-Chr2:1277753 Bpe08g01298 Bpe-Chr8:14312392 3.32E-78 transposed
Bpe06g00083 Bpe-Chr6:1141493 Bpe08g01298 Bpe-Chr8:14312392 7.44E-64 transposed
Bpe11g00832 Bpe-Chr11:6202693 Bpe08g01298 Bpe-Chr8:14312392 3.28E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21810 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01298 - - qsu:111988431 380.948