Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g01298 | ATGATTTCAGAGGTAGAGTCATCCTTCCCGAGAGCATCTCTCCATTACAGTCTCTCCATTCTCAAAGAAAAGGTTCATCAGGTTGAATCAGTGATTACTCTCTTTATCTTTCAAGATCAAACCCACTACGATTCATCGTCTCTGCCAATCTCCACCATAAACTCGCTGATTCAAGAAATCGTCTTCACTGCGTCTTCCATGCTGGTAACTTTTCAGCAAACGCCTCCTGCTGGTTCAAACCCTCGTAATATGATCGACCCCGATGAATTCCCCCATCATCGCCGTTTTTCCTCTCACCGGACCTCCGACGGTAGCCATGGTCAAGAATTCAATCCTAGCGAGACGACGTCGCTTGATTGGTATGTACCAGAAAGCTTCAACAATGGCGGGACATCAAATAATTGTCAGAATTTCGAAAAAAAGAAAGAAGAGAATCAAAATCGCTCTCCTAAGCATTACGATATAATAGAATTACAGGCTGCAGACTTGTTAGCTAAGTACACCCATCACTGCCAAGTCTGTGGAAAAGGGTTCAAACGAGATGCAAATTTGAGAATGCACATGAGGGCCCATGGCGACGAGTATAAAACCAGTGCATCTTTACGCAACCCAATGAAAAACGACGAAAGTTGGAAGAAGAGAGAGGATTTTCCGGGAAAGTTACCGAGAAAATGGGCGTACTCATGTCCGCAGGAAGGTTGCCGGTGGAATCGAAAGCACGCCAAGTTTCAGCCTCTGAAGTCGATGATTTGCGTGAAGAATCATTACAAAAGAAGCCACTGCCCTAAAATGTACATATGCAAGAGGTGCAACCAGAAGCAATTTTCAGTTCTGTCTGATTTGAAAACCCATGAGAAACACTGCGGAGATCTGAAATGGCAGTGTTCTTGCGGAACTACGTTTTCCAGAAAAGATAAGTTAATGGGTCATGTTGCTTTGTTTGTGGGTCATTCGCCATTGACGAGTTCTGTGATGAAGCAGAGAAAGTCTGAGAGCCAAACTGTAGATTACAGCTGGGTTGTGTAA | 1026 | 44.15 | MISEVESSFPRASLHYSLSILKEKVHQVESVITLFIFQDQTHYDSSSLPISTINSLIQEIVFTASSMLVTFQQTPPAGSNPRNMIDPDEFPHHRRFSSHRTSDGSHGQEFNPSETTSLDWYVPESFNNGGTSNNCQNFEKKKEENQNRSPKHYDIIELQAADLLAKYTHHCQVCGKGFKRDANLRMHMRAHGDEYKTSASLRNPMKNDESWKKREDFPGKLPRKWAYSCPQEGCRWNRKHAKFQPLKSMICVKNHYKRSHCPKMYICKRCNQKQFSVLSDLKTHEKHCGDLKWQCSCGTTFSRKDKLMGHVALFVGHSPLTSSVMKQRKSESQTVDYSWVV | 341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 14312392 | 14313417 | - | Bpe023418.1 | Bpe08g01298 | 108174 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g01298 | 341 | MobiDBLite | consensus disorder prediction | 89 | 114 | - | - | |
Bpe08g01298 | 341 | MobiDBLite | consensus disorder prediction | 137 | 151 | - | - | |
Bpe08g01298 | 341 | Gene3D | Classic Zinc Finger | 263 | 313 | - | - | |
Bpe08g01298 | 341 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 169 | 196 | IPR013087 | - | |
Bpe08g01298 | 341 | PANTHER | PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 | 9 | 333 | IPR044300 | GO:0010044|GO:0010447 | |
Bpe08g01298 | 341 | MobiDBLite | consensus disorder prediction | 130 | 151 | - | - | |
Bpe08g01298 | 341 | SUPERFAMILY | beta-beta-alpha zinc fingers | 167 | 194 | IPR036236 | - | |
Bpe08g01298 | 341 | PANTHER | OS08G0562300 PROTEIN | 9 | 333 | - | - | |
Bpe08g01298 | 341 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 171 | 191 | IPR013087 | - | |
Bpe08g01298 | 341 | SMART | c2h2final6 | 169 | 191 | IPR013087 | - | |
Bpe08g01298 | 341 | SMART | c2h2final6 | 227 | 260 | IPR013087 | - | |
Bpe08g01298 | 341 | SMART | c2h2final6 | 265 | 287 | IPR013087 | - | |
Bpe08g01298 | 341 | Gene3D | Classic Zinc Finger | 151 | 220 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe08g01298 | Bpe11g00832 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g01298 | Bpe-Chr8:14312392 | Bpe10g00553 | Bpe-Chr10:12575854 | 6.94E-26 | dispersed | |
Bpe02g00184 | Bpe-Chr2:1277753 | Bpe08g01298 | Bpe-Chr8:14312392 | 3.32E-78 | transposed | |
Bpe06g00083 | Bpe-Chr6:1141493 | Bpe08g01298 | Bpe-Chr8:14312392 | 7.44E-64 | transposed | |
Bpe11g00832 | Bpe-Chr11:6202693 | Bpe08g01298 | Bpe-Chr8:14312392 | 3.28E-168 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21810 | None | None | None | None | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g01298 | - | - | qsu:111988431 | 380.948 |