Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01301 ATGTTTAATCAGTTCGAAGCTTCTGCAAACCCACTAATGCAGCTCCAAGGCTTTGATTTGGAGCTTCATGATTTCATGGCCAGTTCTAACTTCGACCAGTTTGTCGATCTAATCAGAGGAGAAAACGAAAACCCAGTTTATGATGGGTGCTTTGCAGATGATCAGTTTGGTCCGTCAAACCCAGGAGATATCTTGGATTTCAATGGCGTTCCTGGATCAGTCGGCCAAGACTTTATGATGTTTAACAGATTGGAGAGATTTGATGATGGAGAAGTGATCAAGGGAGGGGAAGAAGAAGATGATGAGAATGATGAGGAGGATTCTTCTGCTACGACTACGACAGTGACGAATGGAACGACGGCGAAGGGGGGCAAGGCCGACAGATCGAGAACTTTGATTTCAGAGAGAAGAAGAAGAGGGAGGATGAAAGAGAAGCTTTATGCACTGCGTTCGTTGGTTCCAAACATAACCAAGATGGATAAAGCCTCCATTGTTGGAGATGCTGTATTATACGTGCAAGACCTGCAAATGCAGGCCAAAAAACTCAAGGCTGAGATAAAGGGCATAGAAGAGACGATTGAAAGAGCACAAGGCTATGGAGGAGTAGCTCAAAACCCTGAAAAGATTCACCGGATTCCTCGTTCTACCAGTTTGGTTCCAAAGAAAATCACTCAGATGGATATTTTTCAGGTCGAGGAAAGAGGGTTTTACTTGAGGATAGTATGCGAGAGAGGAGATGGAGTAGCCAGGTCTCTTTACCAAGTTGTTGAATCTATGAGGGGCTTTAATGTTCAGTGCTCAAATTTTGCGACTCAGACTCAAACATTTGTTTTGACAGCAACTCTCAACGTGGTGAAAGATTGTGAGCAGGAGATGAAGTTGCCAAATTTGAAGGTTTGGTTGACCGGAGCTCTTCTTAACCAAGGATTTGAGTTTAAACCAGCTTTCCTCAACTTGTAG 960 43.75 MFNQFEASANPLMQLQGFDLELHDFMASSNFDQFVDLIRGENENPVYDGCFADDQFGPSNPGDILDFNGVPGSVGQDFMMFNRLERFDDGEVIKGGEEEDDENDEEDSSATTTTVTNGTTAKGGKADRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQDLQMQAKKLKAEIKGIEETIERAQGYGGVAQNPEKIHRIPRSTSLVPKKITQMDIFQVEERGFYLRIVCERGDGVARSLYQVVESMRGFNVQCSNFATQTQTFVLTATLNVVKDCEQEMKLPNLKVWLTGALLNQGFEFKPAFLNL 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14326376 14328592 - Bpe023421.1 Bpe08g01301 108177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01301 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Bpe08g01301 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 189 IPR036638 GO:0046983
Bpe08g01301 319 SMART finulus 132 181 IPR011598 GO:0046983
Bpe08g01301 319 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 81 312 - -
Bpe08g01301 319 Coils Coil 172 199 - -
Bpe08g01301 319 MobiDBLite consensus disorder prediction 94 108 - -
Bpe08g01301 319 PANTHER TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR 81 312 - -
Bpe08g01301 319 MobiDBLite consensus disorder prediction 109 124 - -
Bpe08g01301 319 MobiDBLite consensus disorder prediction 93 135 - -
Bpe08g01301 319 Pfam Helix-loop-helix DNA-binding domain 131 176 IPR011598 GO:0046983
Bpe08g01301 319 Gene3D - 119 192 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01301 Bpe11g00830 CCT
Bpe08g01301 Bpe08g00180 CCT
Bpe01g00218 Bpe08g01301 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01301 Bpe-Chr8:14326376 Bpe13g01099 Bpe-Chr13:16569000 2.01E-17 dispersed
Bpe01g00218 Bpe-Chr1:1340377 Bpe08g01301 Bpe-Chr8:14326376 2.34E-106 wgd
Bpe11g00830 Bpe-Chr11:6188792 Bpe08g01301 Bpe-Chr8:14326376 2.57E-152 wgd
Bpe08g00180 Bpe-Chr8:994639 Bpe08g01301 Bpe-Chr8:14326376 1.07E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21812 PF00010 HLH 4.20E-09 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01301 - - qsu:112032263 293.893