Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01305 ATGGAGAAATCTGGGTATGGCCGGGATGGCGTTTTCAGGTCTCTCAGACCCCCACTTGTCCTTCCCCAAGACCCTGACCTCTCTATGGTTTCCTTCCTCTTCAGAAACTCTTCCTCTTATTCGCACAAACCTGCCCTCATCGATGCCGATGCTTCTGGGACCCTGTCGTTTTCCCAGCTCAAATTCATGGTGATTAAGGTCTCCCATGGCTTACTTCATCTGGGTATCAAGAAGAACGACATTGTACTGATCTTCGCCCCGAATTCAATCCAATTTCCGATCTGTTTCCTCGGAATTATAGCTGTCGGAGCTATTGCGACAACTTGTAATCCGATTTACACTCTCTCTGAACTGACAAAGCAAGTTAGAGATTCGAAACCGAAGCTCGTAATTACAGTTGCTGAGTTATGGGACAAAGTGATGAATTTCAATCTCCCGACAGTGTTACTCGGACCAGAAGGGTCATTTCCGTCAATATTATCGAATTCGAAGATTCTAACCTTCCATGATTTGGTCCAATTAGGCCGGTCGGAGTCCCATTTTCCGGCCGTGAAAATCAAGCAGACAGACACAGCTGTGCTATTGTACTCATCGGGAACAACAGGTACTAGTAAGGGGGTGATTCTATCTCACAGAAATTTCATATCGGCGTCTCAAATGATTGTATTGGACCAAATAATGGCTGGGGAAATGCACAATGTTTTTCTCAACGTTTTGCCTCTATTTCATGTTTTTGGACTGTGTTGTATTACATTTTCACAGCTTCAGAAAGGCAATGCTGTTGTGATAATGTCTAAATTTGAATTTGAAAAGTTGCTATCGGCTGTCGAGATGTACAAGGTCACTGATTTATGGATTGTGCCTCCAATCGTGCTGGCTTTGGCCAAGCAAAGTGTGGTTAAGAAGTATAATCTTTCCTCATTGAGGCATATAGGTTCTGGGGCTGCACCTTTGGGCAAAGATTTAATGGAGGAATGTGCTAAGAACATTCCCACTGCTCAGGTTATTCAGGGATATGGTATGACTGAAACTTGTGGAATCATCGCTTTGGAGAACCCGGATGTCGGACTTCGAAATACTGGTACGGCTGGAACGCTTGTCGGAGGAGTCGAGGCTCAAATCATCAATGTTGATACTCTGAAGTCTCTCCCTCCTAATCAAATGGGAGAGATTTGGGCTCGAGGACCTAATATGATGCAAGATCGTATTGCACTCTGTTGCAACGTTGACTTGCTCCATTCAGGTTATTTCAACAATCCTCAGGCCACAAGGCAGACCATCGATCGGAACAGCTGGGTACATACTGGAGATCTTGGATATTTTGACGACAATGGCCGACTTTTTGTTGTTGATCGAATTAAAGAGCTTATCAAGTACAAAGGTTTCCAGATTGCACCGGCTGAGCTCGAAGGGCTGCTTGTGGCTCACCCGGAAATATTAGATTCCGTTGTCATCCCATTCCCGGATGCCGAAGCCGGAGAGGTACCAATTGCATACGTAGTTCGCTCTCCCAACAGCTCACTCACAGAAGAAGACATAATGGAATTCATTGCCAAACAGGTGGCATCATTCAAGAGATTACGAAGGGTGACATTTGTTAACAGCGTACCAAAGTCGGCCTCGGGGAAAATCTTGAGGAGAGAGCTGATCGAGAAAGTTCGCTCCAAAATTTGA 1674 45.1 MEKSGYGRDGVFRSLRPPLVLPQDPDLSMVSFLFRNSSSYSHKPALIDADASGTLSFSQLKFMVIKVSHGLLHLGIKKNDIVLIFAPNSIQFPICFLGIIAVGAIATTCNPIYTLSELTKQVRDSKPKLVITVAELWDKVMNFNLPTVLLGPEGSFPSILSNSKILTFHDLVQLGRSESHFPAVKIKQTDTAVLLYSSGTTGTSKGVILSHRNFISASQMIVLDQIMAGEMHNVFLNVLPLFHVFGLCCITFSQLQKGNAVVIMSKFEFEKLLSAVEMYKVTDLWIVPPIVLALAKQSVVKKYNLSSLRHIGSGAAPLGKDLMEECAKNIPTAQVIQGYGMTETCGIIALENPDVGLRNTGTAGTLVGGVEAQIINVDTLKSLPPNQMGEIWARGPNMMQDRIALCCNVDLLHSGYFNNPQATRQTIDRNSWVHTGDLGYFDDNGRLFVVDRIKELIKYKGFQIAPAELEGLLVAHPEILDSVVIPFPDAEAGEVPIAYVVRSPNSSLTEEDIMEFIAKQVASFKRLRRVTFVNSVPKSASGKILRRELIEKVRSKI 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14351894 14354607 + Bpe023425.1 Bpe08g01305 108181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01305 557 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Bpe08g01305 557 SUPERFAMILY Acetyl-CoA synthetase-like 22 555 - -
Bpe08g01305 557 Gene3D - 10 454 IPR042099 -
Bpe08g01305 557 Pfam AMP-binding enzyme 35 459 IPR000873 -
Bpe08g01305 557 Pfam AMP-binding enzyme C-terminal domain 468 543 IPR025110 -
Bpe08g01305 557 Gene3D - 455 556 IPR045851 -
Bpe08g01305 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 556 - -
Bpe08g01305 557 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 556 - -
Bpe08g01305 557 CDD 4CL 21 549 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01305 Bpe11g00825 CCT
Bpe08g01305 Bpe11g00825 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00480 Bpe-Chr1:2978952 Bpe08g01305 Bpe-Chr8:14351894 4.65E-41 dispersed
Bpe08g01305 Bpe-Chr8:14351894 Bpe11g00304 Bpe-Chr11:2228801 2.23E-141 dispersed
Bpe11g00825 Bpe-Chr11:6153213 Bpe08g01305 Bpe-Chr8:14351894 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01305 K01904 - fve:101299638 843.573