Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01308 ATGGCGGGCGTCGAGGGTTCACCTGGAAGCTCCATGCATGGAGTAACAGGAAGAGAACAGACCTTCGCCTTTTCTGTTGCTTCTCCGATGGTGCCTAGCGACCCTACCGCTAAGTTCGATTTACCCGTTGATTCTGAACACAAGGCTAAGGTTTTCAAGCTCTTCTCCTTCGCTAATCCCCATATGCGAACCTTCCACCTATCGTGGATTTCCTTCTTCACCTGCTTCGTTTCCACCTTCGCCGCCGCTCCTCTCGTCCCGATCATCAGAGACAATCTTGGCCTGACGAAACCAGACATCGGAAACGCCGGCGTCGCCTCGGTTTCCGGCAGTATTTTCTCTAGGCTTGTGATGGGGGCAGTCTGCGACCTCCTCGGTCCTCGCTATGGCTGTGCCTTTCTCATCATGCTCGCCGCACCGACCGTCTTCTGCATGTCTTTTGTATCATCGGCTGCCGGGTACATAGCTGTGCGGTTCATGATCGGATTCTCTTTGGCTACTTTCGTCTCCTGCCAGTACTGGATGAGCACCATGTTCAACAGCCAGATCATAGGGCTGGTCAACGGAACGGCGGCGGGATGGGGGAACATGGGAGGAGGAGCGACTCAGCTGTTGATGCCTTTTCTTTATGAGATTATCAAAAGAATTGGTTCTACTCCGTTTACTGCCTGGAGAATCGCCTTCTTCATTCCCGGTTGGATGCATGTGATCATGGGTCTCCTGGTTTTAACCCTAGGTCAAGATTTGCCTGATGGAAATCTAAGCACTCTTCAGAAAAAGGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTTCTTTGGTATGCGGTTACGAATTACAGAACTTGGATCTTCGTCCTCCTCTATGGCTACTCCATGGGAGTCGAGCTTTCTACTGATAACGTCATCGCTGAGTATTTCTACGACAGGTTTGACCTAAATCTTCACACTGCCGGGATCATAGCAGCGAGCTTCGGAATGGCTAACCTAGTGGCTCGTCCTTTCGGTGGGTACGCTTCCGACGTCGCGGCTCGTTATTTTGGAATGAGAGGAAGGCTATGGACCCTCTGGATCCTCCAAACCCTAGGTGGAGTTTTCTGCGTTTGGCTGGGACTGGCTACCTCCCTCCCCATCGCCATCTTCGCCATGATACTCTTCTCCATCGGAGCTCAAGCCGCGTGCGGAGCCACTTTTGGCATCATCCCCTTCATCTCTCGCCGCTCCCTGGGAATTATCTCGGGGTTGACCGGTGCCGGAGGGAACTTCGGTTCTGGTCTGACGCAGTTAGTGTTCTTCACAAACGCGGGCTTTTCTACAGAAAAAGGTCTGACTTACATGGGGGCAATGATCATTGCCTGCACTTTGCCAGTTACTCTGGTTCACTTTCCACAGTGGGGAAGCATGTTCTTGCCGCCGTCAAGGAGCGTAGAGAAAGGTACGGAAGAATTCTATTACGGGTCGGAATGGAATGAGGATGAGAAGAAGAAGGGGCTTCACCAGCAGAGTATCAAGTTCGCTGAAAACAGTCGATCTGAACGAGGAAGACGGGTTGCTTCTGCTCCTACTCCACCAAACACAACACCTACTCATGTTTAA 1593 51.66 MAGVEGSPGSSMHGVTGREQTFAFSVASPMVPSDPTAKFDLPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLGLTKPDIGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLAAPTVFCMSFVSSAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLLMPFLYEIIKRIGSTPFTAWRIAFFIPGWMHVIMGLLVLTLGQDLPDGNLSTLQKKGDVAKDKFSKVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVIAEYFYDRFDLNLHTAGIIAASFGMANLVARPFGGYASDVAARYFGMRGRLWTLWILQTLGGVFCVWLGLATSLPIAIFAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFTNAGFSTEKGLTYMGAMIIACTLPVTLVHFPQWGSMFLPPSRSVEKGTEEFYYGSEWNEDEKKKGLHQQSIKFAENSRSERGRRVASAPTPPNTTPTHV 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14368354 14370105 - Bpe023428.1 Bpe08g01308 108184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01308 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 527 IPR044772 GO:0015112
Bpe08g01308 530 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Bpe08g01308 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Bpe08g01308 530 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Bpe08g01308 530 MobiDBLite consensus disorder prediction 491 530 - -
Bpe08g01308 530 MobiDBLite consensus disorder prediction 491 513 - -
Bpe08g01308 530 Gene3D MFS general substrate transporter like domains 57 254 IPR036259 -
Bpe08g01308 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 464 IPR020846 GO:0022857
Bpe08g01308 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 527 - -
Bpe08g01308 530 SUPERFAMILY MFS general substrate transporter 58 459 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00205 Bpe-Chr1:1253963 Bpe08g01308 Bpe-Chr8:14368354 0 dispersed
Bpe08g01308 Bpe-Chr8:14368354 Bpe11g01795 Bpe-Chr11:14282622 0 dispersed
Bpe08g01307 Bpe-Chr8:14361328 Bpe08g01308 Bpe-Chr8:14368354 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01308 K02575 - jre:108985433 957.592