Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01320 ATGGCTATGGCAGTGGTCCATCAGAGAGAGAGTAGCAGTGGAAGCATAACTAAACACCTAGATAGCTCCGGAAAGTACGTCCGGTACACCGCCGAGCAGGTCGAGGCTCTTGAGCGAGTCTACGCTGAGTGTCCCAAGCCAAGCTCTTTGCGCAGGCAACAGCTCATCCGAGAATGCCCTATTCTTGCTAACATCGACTCCAAACAGATCAAAGTCTGGTTCCAGAATCGCAGGTGTAGAGAAAAGCAGAGGAAGGAATCCTCTAGGCTACTAACAGTGAATCGGAAATTGACTGCCATGAACAAGCTGTTAATGGAGGAGAATGATCGCTTACAGAAACAAGTTTCACAGCTCGTATGTGAAAATGGGTTTATGCGGCAGCAATTGCATACCCCATTGGGTGCGGCTGCTGATGGGAGCTGCGACTCAGTGATTACGACTCCTCAGCATTCTCTCAGAGATGCTAATAACCCTGCTGGACTCCTCTCCATTGCAGATGAGGTCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACCACTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATATTTTCTATTTCTCAATGCTGCAGTGGAGTGGCAGCTCGAGCTTGTGGTCTTGTTAGTTTAGAACCTACAAAGATTGCAGAGATCCTTAAAGATAAACCATCCTGGTTTCGGCAATGCCGGAACCTTGAAGTTTTTACCATGTTTCCTGCTGGAAATGGTGGGATAATTGAACTTGTTTACACACAGGTTTACGCTCCTACGACACTGGCTGCGGCACGAGATTTCTGGACCCTTCGATTTACTACTATGTTAGACAACGGTAGCATTGTGGTTTGTGAGAGATCTCTGTCTGGCTCTGGTGCTGGCCCTAATACAGCTGCTGTGTCTCAATTTGTACGAGCAGAGATGCTTCCAAGTGGTTATCTTATTCGGCCATGTGAGGGTGGAGGGTCAATAATACATATTGTTGACCATCTGAATCTTGAGGCATGGAGCGTACCTGAGGTGCTTCGACCACTTTATGAATCATCAGAAGCAGTGGCTCAGAAATTAACTAAAGCTGCATTGCGCTATATCAGGCAAATAGCTCAAGAAACGAGTGGTGAAGTTGTATATAGTTTGGGAAGGCAGCCAGCTGTTCTTCGAACGTTTAGTCACAGATTGAGCCGGGGCTTTAATGATATTGTGAATGGATTTAATGATGATGGCTGGTCAATAATTAATTGTGATGAAGGAGAAGATGTTATACTTGCCGTGAATTCAGCCAAAAACTTGAGCCTAAGTTCTATTTATTCAAGTTCTGTAGCTTTCCTTGGTGGGGTTCTTTGTGCAAAGGCGTCAATGCTTCTCCAAAATGTTTCTCCTGCTGTGCTTGTTCGGTTTTTGAGAGAGCACCGCTCGGAGTGGGCCGATTTTAATATCGATGCTTATTCTGCTTCGGCGTTGAAAGCTGGTTCTTATTCCTATGCTGGGATGAGGGAGTTGAAGTTTACGGGGAGTCAAATTATAATACCACTGGGTCATACTATTGAACAGGAAGAGTCGCTTGAAGTTGTTCGACTTGAAGGTCATTCTCTTGCCTCAAAAGATACTTTTGTATCAAGGGATGCTCATCTTTTGCAGTTCGTTACTGGATTAGCTGGTCTCTTTAAAAAATTTCTTTTATGTATTTGGAAGCAGATATGTAGTGGCATTGATGAGAATGCCGTGGGAGCTTCTTCAGAACTAATTTTTGCTCCAATCGACGAAATGTTTCCTGACGATGCCCCCCTGCTTCCTTCCGGCTTTAGGATCATTCCTTTGGATTCAAAAACTGACAATACAAAGGATTTCATAGCCTCGTATCGGACCCTTGATTTGACATCGAGTCTTGAAGTTGGTTCAAGTGCTGGGGGCTCATCTTGTCAAAATTCACGATCGGTTTTAACCATTGCCTTTCAGTTTCCATTCGAGACAAGCCTTCAGAATAATGTCGCAACCATGGCTCGACAGTACGTGAGAAGTGTAATTTCTTCTGTTCAGAGGGTTGCCGTTGCCATTTCTCCTTCTGGGTTTGAACCGGGACTTGGACCGAAGATTTCTAGCAGTACTCCCGAGGCTCGTACTCTTGCACATTGGATCTGTCAGAGCTATAGATGTCAAATCGGAGGAGATTTGCTGGAATCCGATTTGGACGACAGAGATGATGTTCTAAAACATCTATGGACTCATCAAGATGCAATTGTGTGCTGTTCATTGAAGGCGCTGCCGGTTTTTATGTTTGCCAATCAAGCCGGCCTCGACATGCTCGAGACGACTCTAGTTGCTCTGCAAGATTTCTCCTTGGACAAGATCTTCGGACCGAAGGTGTTGTGTTCAGAATTTGCAAAGTTGATGCATCTGGGATTCATTTACTTGCCGGCTGGAATCTGCGCATCAACGATGGGTCGACGTGTTTCTTACGAACAAGCTGTTGGTTGGAAAGTGATAGCATCAGAGGATAACAGTGTTCATTGCTTGGCCTTATCTTTCATAAACTGGTCTTTTGTGTGA 2565 45.42 MAMAVVHQRESSSGSITKHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIDSKQIKVWFQNRRCREKQRKESSRLLTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTPLGAAADGSCDSVITTPQHSLRDANNPAGLLSIADEVLAEFLSKATGTTVDWVQMPGMKPGPDSVGIFSISQCCSGVAARACGLVSLEPTKIAEILKDKPSWFRQCRNLEVFTMFPAGNGGIIELVYTQVYAPTTLAAARDFWTLRFTTMLDNGSIVVCERSLSGSGAGPNTAAVSQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSEAVAQKLTKAALRYIRQIAQETSGEVVYSLGRQPAVLRTFSHRLSRGFNDIVNGFNDDGWSIINCDEGEDVILAVNSAKNLSLSSIYSSSVAFLGGVLCAKASMLLQNVSPAVLVRFLREHRSEWADFNIDAYSASALKAGSYSYAGMRELKFTGSQIIIPLGHTIEQEESLEVVRLEGHSLASKDTFVSRDAHLLQFVTGLAGLFKKFLLCIWKQICSGIDENAVGASSELIFAPIDEMFPDDAPLLPSGFRIIPLDSKTDNTKDFIASYRTLDLTSSLEVGSSAGGSSCQNSRSVLTIAFQFPFETSLQNNVATMARQYVRSVISSVQRVAVAISPSGFEPGLGPKISSSTPEARTLAHWICQSYRCQIGGDLLESDLDDRDDVLKHLWTHQDAIVCCSLKALPVFMFANQAGLDMLETTLVALQDFSLDKIFGPKVLCSEFAKLMHLGFIYLPAGICASTMGRRVSYEQAVGWKVIASEDNSVHCLALSFINWSFV 854
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14447614 14452369 - Bpe023440.1 Bpe08g01320 108196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01320 854 SUPERFAMILY Homeodomain-like 21 86 IPR009057 -
Bpe08g01320 854 SMART HOX_1 22 88 IPR001356 GO:0003677
Bpe08g01320 854 SMART START_1 163 373 IPR002913 GO:0008289
Bpe08g01320 854 ProSiteProfiles START domain profile. 154 382 IPR002913 GO:0008289
Bpe08g01320 854 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 854 IPR044830 GO:0003700
Bpe08g01320 854 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Bpe08g01320 854 SUPERFAMILY Bet v1-like 163 375 - -
Bpe08g01320 854 Pfam MEKHLA domain 713 853 IPR013978 -
Bpe08g01320 854 Coils Coil 94 121 - -
Bpe08g01320 854 Gene3D - 18 89 - -
Bpe08g01320 854 Pfam START domain 164 371 IPR002913 GO:0008289
Bpe08g01320 854 CDD homeodomain 25 85 IPR001356 GO:0003677
Bpe08g01320 854 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Bpe08g01320 854 Gene3D - 200 379 IPR023393 -
Bpe08g01320 854 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 854 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01320 Bpe11g00813 CCT
Bpe08g01320 Bpe11g00813 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01320 Bpe-Chr8:14447614 Bpe10g00665 Bpe-Chr10:13226686 0 dispersed
Bpe11g00813 Bpe-Chr11:6065519 Bpe08g01320 Bpe-Chr8:14447614 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21814 PF01852 START 2.10E-43 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01320 K09338 - pvy:116143871 1346.26