Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01337 ATGGAGTGCAGTGAAGCAAATACATCTGGCTCATCAAACCCTGCAATTTCTACGTCGCCGGTTTCAGCGTCTTCTCCTTCCTCTCAGGGAGTGTCTTTTCATGTAATTCTCAGTCCTTGCGCAGCTTGCAAGATTTTGCGGCGGAGATGCGCCGAGAAATGTGTACTGGCGCCGTACTTTCCTCCCTCTGATCCGGCGAAATTCACCATAGCTCATCGAGTCTTTGGTGCCAGTAATATCATCAAGTTTTTGCAGGAGCTACCAGAGAGTCAAAGAGCCGACGCAGTAAGCAGCATGGTGTACGAAGCAAGTGCGAGAATAAGAAATCCAGTTTATGGATGTGCAGGCGCCATTTGCCAGCTTCAAAAGCAAGTGAACGAGCTTCAAGCTGAATTAGCCAAAGCCCAGGCCGAGCTAGCCAACATGCAGTATCAGCAGACCAACCTCGTCTCTCTAATTTGCAGAGAGTTTTCACAGTCTTCTCAGCCATGGCCGAATCACCATCATCATCGTCAATCCCTTGATGATTTCATTCTGAACGACCCTCATTCTTACCTCACGAACAACGCTGGTTTCTTCGAAGACGGCTCTATGTGGGAGCCTCTTTGGACTTGA 615 48.78 MECSEANTSGSSNPAISTSPVSASSPSSQGVSFHVILSPCAACKILRRRCAEKCVLAPYFPPSDPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRNPVYGCAGAICQLQKQVNELQAELAKAQAELANMQYQQTNLVSLICREFSQSSQPWPNHHHHRQSLDDFILNDPHSYLTNNAGFFEDGSMWEPLWT 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14548087 14549066 - Bpe023456.1 Bpe08g01337 108213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01337 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 25 203 - -
Bpe08g01337 204 Coils Coil 118 145 - -
Bpe08g01337 204 Pfam Lateral organ boundaries (LOB) domain 39 136 IPR004883 -
Bpe08g01337 204 MobiDBLite consensus disorder prediction 1 23 - -
Bpe08g01337 204 ProSiteProfiles LOB domain profile. 38 139 IPR004883 -
Bpe08g01337 204 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 25 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01337 Bpe-Chr8:14548087 Bpe15g01174 Bpe-Chr15:20604486 1.34E-51 dispersed
Bpe08g00658 Bpe-Chr8:6827231 Bpe08g01337 Bpe-Chr8:14548087 2.05E-75 transposed
Bpe11g00799 Bpe-Chr11:5972106 Bpe08g01337 Bpe-Chr8:14548087 1.06E-111 wgd
Bpe15g01073 Bpe-Chr15:19963663 Bpe08g01337 Bpe-Chr8:14548087 1.51E-70 wgd
Bpe04g01869 Bpe-Chr4:23824443 Bpe08g01337 Bpe-Chr8:14548087 6.25E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21816 PF03195 LOB 2.80E-41 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01337 - - jre:108989605 253.832