Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01366 ATGATTTTCTCGTCTGTTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAGCCACCAGATGATCATCAGCTAAGAAATGAAAACCTCAACGAGATTGCATCCTTTCCCCAGCCACAGCGGCCACCCTCGAGCTCAACAAGGCCTGGTTCGATGGCTGACCGAGCCCGACTAGCCAAGATGCCCCAGCCGGAGGTTCAACTCAAGTGTCCAAGATGTGAATCGTCCAACACAAAGTTTTGCTACTACAACAATTACAACCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGTTACTGGACCCAAGGCGGTGCTCTCCGCAACGTTCCGGTCGGAGGTGGCTGCCGAAGAAACAAGAAGAACAAAAGTAAATCCTCAAAGTCCTCGTCAGAAAGACCAACTACTAGTAATTTAAGCTCAGGCTCGATTCCGTCAGGAAATAGTACAAGAGAGATGATCAATCATTTCCAGCAAAACCCTAATCAGTTTCCCTTCATCTCCTCACGGCCAAGCTTTAGCAGCTATGGAGTTGGAACCTTAGGAGGACCGTCAAACTTCAACGAGATCCAGCTACAAAGTGAAATAGAAGGAGTGGATCACCAATGGCGGTCTCAGCAATTTCCTTTCCTAGGTGGTTTTGAAGCGACAGGTTTGTACCCGTATCAAAATGACGGCGTTGAAGCTCCATCTTCAGCTGCTGAAGCTACTCATCTTCAAGAAAGGACATTGAATACTAGGGCTACCCAATTTCCTCCTGTTAAAATTGAAGAAAGTCAAATGCTAAACTTAACCAGAGGACCATCGTTGGAAGTTTTGAACAACAGTCAGATCTTTGGTGCAAATGCTTGGACAGATTTATCAGGTCTCAGCTCCTCCTTCACCAACCATTTCTTCTGA 900 47.0 MIFSSVPVYLDPPNWQQPPDDHQLRNENLNEIASFPQPQRPPSSSTRPGSMADRARLAKMPQPEVQLKCPRCESSNTKFCYYNNYNLSQPRHFCKTCRRYWTQGGALRNVPVGGGCRRNKKNKSKSSKSSSERPTTSNLSSGSIPSGNSTREMINHFQQNPNQFPFISSRPSFSSYGVGTLGGPSNFNEIQLQSEIEGVDHQWRSQQFPFLGGFEATGLYPYQNDGVEAPSSAAEATHLQERTLNTRATQFPPVKIEESQMLNLTRGPSLEVLNNSQIFGANAWTDLSGLSSSFTNHFF 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14735050 14736118 + Bpe023486.1 Bpe08g01366 108242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01366 299 Pfam Dof domain, zinc finger 66 121 IPR003851 GO:0003677|GO:0006355
Bpe08g01366 299 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 21 294 - -
Bpe08g01366 299 MobiDBLite consensus disorder prediction 111 151 - -
Bpe08g01366 299 ProSiteProfiles Zinc finger Dof-type profile. 67 121 IPR003851 GO:0003677|GO:0006355
Bpe08g01366 299 MobiDBLite consensus disorder prediction 19 50 - -
Bpe08g01366 299 MobiDBLite consensus disorder prediction 129 151 - -
Bpe08g01366 299 MobiDBLite consensus disorder prediction 12 62 - -
Bpe08g01366 299 ProSitePatterns Zinc finger Dof-type signature. 69 105 IPR003851 GO:0003677|GO:0006355
Bpe08g01366 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 294 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01366 Bpe-Chr8:14735050 Bpe10g00044 Bpe-Chr10:647821 1.18E-34 dispersed
Bpe15g00348 Bpe-Chr15:15029765 Bpe08g01366 Bpe-Chr8:14735050 1.86E-32 dispersed
Bpe15g01111 Bpe-Chr15:20233028 Bpe08g01366 Bpe-Chr8:14735050 7.94E-66 wgd
Bpe02g00845 Bpe-Chr2:6257405 Bpe08g01366 Bpe-Chr8:14735050 1.68E-50 wgd
Bpe03g01040 Bpe-Chr3:29734000 Bpe08g01366 Bpe-Chr8:14735050 8.45E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21818 PF02701 zf-Dof 7.70E-33 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01366 - - jre:108993006 278.1