Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01367 ATGGCGGAGGAGAAAGGTAATATCGTTAAGGGCCTGATCGAGCTATTGAACGATATCTCTTGCATCTCGGATTACAGGTACATTGTGAAGAAGCAGTATTGCAATTTAGTGAGGCGATTAAAGCTCTTGACCCCAATGTTCGAAGAGATAAGGGACAGCGGAGAGGCGCTCCCCGAGCAGACTCTGAAAGCTCTAGTTTCATTGCAAGCAGCTTTGAAATCAGCTATAGAGTTACTCAAATTTGGGAGCGTGGGAAGTAAGATTTATCTGGTCCTTGAAACGGAGCAAATTATGCATGATTTTGACAAGATAACAGCTCAATTGGAACAAGCTTTGATTGGAATTTCTTACGATAAACTTGACATATCTGATGAAATTAAGGAACAGGTTGAACTTGTTCTTGCCCAGTTTAGAAGAGCCAAAGGCAGGATTGATACATCTGATGCTCAGCTGCATGACGAGCTTGTATCAGTACATAAGATGAACGATTCTGCTACAGACCCAGCTGTCCTAAAAAGATTGGCTGAAAAATTGGATCTAACTGGAATCCCTCAACTTAAACAAGAGTCACTAGCTTTATCTGAGATGGTTACTGGTGGTGACGACCCAGGGGTGACCATTGAGAAGATGTTAAGGCTGCTAAAGAAAATAAGGGATTTTGTACTCACAGAAAATCCTGACATTGATGATCCAGCTGGAGATAAGAGCATTTCCTCTAGTGATGGTGGACAAACATCTGCTGACAGCAATGGCAAATCTCCAGTTATTCCAGATGATTTTCGTTGTCCCATTTCTCTGGAGTTGATTAAGGATCCTGTCATTGTTTCTACAGGGCAGACTTATGAACGTTCCTGCATTGAAAAGTGGCTGGAAGCAGGGCATGGAACATGTCCAAAGACACAACAAACGCTTTCTACCCCTACTCTTACGCCAAATTACGTCTTGCGTAGTCTCATAGCCCAGTGGTGCGAGACAAATGGACTGGAACCACCAGAAAGACCAAGTAAAACATCTGCTCACTCACGTGCTCAACACATAAAAATGGAAATTCTCCTTTGCAAACTAACGTCTACCAACCCTGAAGACCAGCTTTCTGCTGCTGGTGAAATTCGCCTTCTTGCCAAGCGGAATGCAGATAATCGTGTTGCCATTGCTGAGTCCGGTGCAATACCTCTCCTTGTGAGCCTCCTTTCGGCGACAGATTCACGCACTCAAGAGCATGCAGTAACAGCACTTCTTAACCTTTCCATCTGTGAGGACAACAAGGGAGCCATTGTGTTGTCTGGGGCTATTCCTGGCATAGTTCACGTGCTCAAGAGAGGAAGCATGGAAGCTCGGGAAAATGCAGCAGCCACCCTTTTCAGCCTCTCTGTTGTGGATGGAAATAAAGTAACAATAGGTTCATCGGGGGCCATCCCACCACTTGTTATGCTGCTAAGTCAAGGAACTCAAAGGGGAAAGAAAGATGCTGCCACTGCTCTCTTCAACTTGTGCATGCACTTGGAGAACAAAGGAAAGGCAGTCAGAGCTGGTGTCATTCCCATATTGATGCGACTATTGGCAGAAAGTGGAGGAGGAATGGTAGATGAGGCCTTAGCCATCTTAGCAATACTGGCCAGCCATCCTGAAGGCAAAAGTGCCATTGGAGCAGCAGATGCTGTTCCTGTTTTAGTAGAGGTTATCAGGACTGGATCTCCCAGGAACAGAGAAAATGCCGCTGCAGTTTTGGTGCACCTGTGTTCTTGGGACCAACATCATCTGCTGGAGGCTAAGAAACTTGGGGTGGTTGGGCCGTTGATCGATTTAGCGCAAAATGGCACAGACAGAGGCAAGAGAAAAGCTGCCCAATTGCTAGAGCGGATGAACAGGTTTGTTGAACTGCAGAAGCTGGCACAGGCTGAATCTCAATCTAAGATCCAGACGCCACAGCCGCTGACCACGGTGGATCATAACTGA 1956 45.96 MAEEKGNIVKGLIELLNDISCISDYRYIVKKQYCNLVRRLKLLTPMFEEIRDSGEALPEQTLKALVSLQAALKSAIELLKFGSVGSKIYLVLETEQIMHDFDKITAQLEQALIGISYDKLDISDEIKEQVELVLAQFRRAKGRIDTSDAQLHDELVSVHKMNDSATDPAVLKRLAEKLDLTGIPQLKQESLALSEMVTGGDDPGVTIEKMLRLLKKIRDFVLTENPDIDDPAGDKSISSSDGGQTSADSNGKSPVIPDDFRCPISLELIKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQTLSTPTLTPNYVLRSLIAQWCETNGLEPPERPSKTSAHSRAQHIKMEILLCKLTSTNPEDQLSAAGEIRLLAKRNADNRVAIAESGAIPLLVSLLSATDSRTQEHAVTALLNLSICEDNKGAIVLSGAIPGIVHVLKRGSMEARENAAATLFSLSVVDGNKVTIGSSGAIPPLVMLLSQGTQRGKKDAATALFNLCMHLENKGKAVRAGVIPILMRLLAESGGGMVDEALAILAILASHPEGKSAIGAADAVPVLVEVIRTGSPRNRENAAAVLVHLCSWDQHHLLEAKKLGVVGPLIDLAQNGTDRGKRKAAQLLERMNRFVELQKLAQAESQSKIQTPQPLTTVDHN 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14743875 14747500 - Bpe023487.1 Bpe08g01367 108243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01367 651 MobiDBLite consensus disorder prediction 225 256 - -
Bpe08g01367 651 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 329 IPR013083 -
Bpe08g01367 651 PANTHER U BOX DOMAIN-CONTAINING 7 634 - -
Bpe08g01367 651 Pfam Armadillo/beta-catenin-like repeat 377 416 IPR000225 GO:0005515
Bpe08g01367 651 Pfam Armadillo/beta-catenin-like repeat 542 581 IPR000225 GO:0005515
Bpe08g01367 651 Pfam Armadillo/beta-catenin-like repeat 461 498 IPR000225 GO:0005515
Bpe08g01367 651 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 388 430 IPR000225 GO:0005515
Bpe08g01367 651 SUPERFAMILY RING/U-box 249 332 - -
Bpe08g01367 651 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 511 553 IPR000225 GO:0005515
Bpe08g01367 651 ProSiteProfiles U-box domain profile. 255 329 IPR003613 GO:0004842|GO:0016567
Bpe08g01367 651 Gene3D - 337 485 IPR011989 -
Bpe08g01367 651 Gene3D - 486 641 IPR011989 -
Bpe08g01367 651 SMART Ubox_2 259 322 IPR003613 GO:0004842|GO:0016567
Bpe08g01367 651 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 470 512 IPR000225 GO:0005515
Bpe08g01367 651 MobiDBLite consensus disorder prediction 237 252 - -
Bpe08g01367 651 SUPERFAMILY ARM repeat 348 621 IPR016024 -
Bpe08g01367 651 Gene3D - 5 117 IPR036537 GO:0007166
Bpe08g01367 651 CDD RING-Ubox_PUB 260 302 IPR045210 -
Bpe08g01367 651 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 634 - -
Bpe08g01367 651 SMART arm_5 418 458 IPR000225 GO:0005515
Bpe08g01367 651 SMART arm_5 500 540 IPR000225 GO:0005515
Bpe08g01367 651 SMART arm_5 583 623 IPR000225 GO:0005515
Bpe08g01367 651 SMART arm_5 459 499 IPR000225 GO:0005515
Bpe08g01367 651 SMART arm_5 377 417 IPR000225 GO:0005515
Bpe08g01367 651 SMART arm_5 541 581 IPR000225 GO:0005515
Bpe08g01367 651 Pfam U-box domain 256 326 IPR003613 GO:0004842|GO:0016567
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01367 Bpe11g00764 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00378 Bpe-Chr1:2372105 Bpe08g01367 Bpe-Chr8:14743875 3.24E-62 dispersed
Bpe02g01924 Bpe-Chr2:21211809 Bpe08g01367 Bpe-Chr8:14743875 1.90E-62 dispersed
Bpe06g00066 Bpe-Chr6:766807 Bpe08g01367 Bpe-Chr8:14743875 5.25E-06 dispersed
Bpe06g00129 Bpe-Chr6:2215824 Bpe08g01367 Bpe-Chr8:14743875 5.71E-07 dispersed
Bpe08g01367 Bpe-Chr8:14743875 Bpe11g01609 Bpe-Chr11:12206034 1.29E-158 dispersed
Bpe10g00158 Bpe-Chr10:3818988 Bpe08g01367 Bpe-Chr8:14743875 1.36E-06 dispersed
Bpe10g00785 Bpe-Chr10:14013626 Bpe08g01367 Bpe-Chr8:14743875 1.62E-50 dispersed
Bpe13g00136 Bpe-Chr13:8477602 Bpe08g01367 Bpe-Chr8:14743875 1.91E-32 dispersed
Bpe13g00254 Bpe-Chr13:10503310 Bpe08g01367 Bpe-Chr8:14743875 1.50E-72 dispersed
Bpe15g00315 Bpe-Chr15:14650719 Bpe08g01367 Bpe-Chr8:14743875 1.75E-07 dispersed
Bpe02g00344 Bpe-Chr2:2266431 Bpe08g01367 Bpe-Chr8:14743875 1.50E-17 transposed
Bpe11g00764 Bpe-Chr11:5755923 Bpe08g01367 Bpe-Chr8:14743875 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01367 - - mnt:21407917 934.865