Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01385 ATGGCTGACATGGACATGTCTCCGCCTCCCACGGGCATGTCTGACATGAACGACACCATGCACCAGTCTGCAATGGTGATGTCACATATGACCTTTTTCTGGGGGAAAAACTCAGAGATTCTCTTCTCCGGTTGGCCGGGAACCAGAACCGGTATGTATATTTTGGCTCTCATCCTCGTCTTCCTCTTGTCTGTGATCGTCGAGTGGCTTTCCCACTCTCCGTTGATGAACAGGACTGGGCCCAAGAACATCGCGGCGGGGATCGTTCAGACTGTCCTTCACGCCATAAGAGTCGGGCTTGCTTATCTCGTTATGCTTGCTCTGATGTCCTTCAATGGCGGCGTGTTCGTTGTGGCGGTTTTAGGACACGCAGTTGGGTTCTTGGTTTTCGGGAGTAGAGTTTTCAGGAAGACGGAGATGCTCCGGCCGTTTGACGGCGCTGTCGCTTCAAATCTGACGCCGCCCAAGTCTTCCTGCTGA 480 53.33 MADMDMSPPPTGMSDMNDTMHQSAMVMSHMTFFWGKNSEILFSGWPGTRTGMYILALILVFLLSVIVEWLSHSPLMNRTGPKNIAAGIVQTVLHAIRVGLAYLVMLALMSFNGGVFVVAVLGHAVGFLVFGSRVFRKTEMLRPFDGAVASNLTPPKSSC 159
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14838835 14839314 - Bpe023505.1 Bpe08g01385 108261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01385 159 Pfam Ctr copper transporter family 30 71 IPR007274 GO:0005375|GO:0016021|GO:0035434
Bpe08g01385 159 Pfam Ctr copper transporter family 84 130 IPR007274 GO:0005375|GO:0016021|GO:0035434
Bpe08g01385 159 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 5 141 IPR007274 GO:0005375|GO:0016021|GO:0035434
Bpe08g01385 159 PANTHER - 5 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01385 Bpe-Chr8:14838835 Bpe10g00361 Bpe-Chr10:11208441 3.34E-36 dispersed
Bpe08g01385 Bpe-Chr8:14838835 Bpe08g01386 Bpe-Chr8:14841303 6.32E-45 tandem
Bpe02g00877 Bpe-Chr2:6760914 Bpe08g01385 Bpe-Chr8:14838835 1.09E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01385 K14686 - vvi:100248391 190.66