Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01394 ATGGCGACGAAAATTGCATCTTTTTTCATCAAGTTTTTCTCCCTCTTGATCTTACTTCTCCATGTTGGTTGCTTTATCTTAACCACCCCCACTAGAAACCGCCATAGCCGCAAACAAATCCCACCATCTAAATCAAAACATAGCTACTGCTTCTTCAAACCCTACAAAGCTTTCTCTTTCCTCAAAAACCTCTGCTCCTCCTCCACCGAAACCCGCAGATCAATTATTCAAACCCCACCCTCCACGCCTTCTCAATTATCCCACCAATCCACAGTCCTCCTTAAGCTTGATTCCTCCGATTCTCTGATTAAAAGACCTACAGGGTCCAGCCTGGATTCCGACATCTCGGCCGAAAATCCGTTCTCGCCCCTCAGAAATGACATCTTCCCCTGTACGGCTTGCGGCGAGATTTTTCCGAAACCTGGCCTCCTCGAACAGCATCAAGCTATCAAACACGCCGTTTCGGAGCTTACAGATGGGGATACGGGCAAAAACATAGTTCAGATTATATTCAAAACGGGGTGGACAAGTAGTGAAAAGAACCCGAAAATCAGTCGGATCCTTAAAATTCACAACAGCCAACAGATACTCTCAAGATTCGAAGAGTACAGAGAGACAGTAAAGATCAAGGCGGCAAGAAACACCAGCGTCAGAAGGAGAGACGAAAGGTGTATAGCCGATGGAAACGAGCTTCTGAGGTTCCACTGTTCCACTTTCGTCTGCGATTTAGGAGTGAATGGTAATTCCAGCATATGTAGCCAGCAATTTTGTAATGTCTGCGAGATTATAAAATCTGGGTTTTCGCCCAAACTGGACGGAATATCCACGCTTTCAAACAGCTGGAGGGCGCACGTGTCGATGCCGGAGGAGGTGGAGGAGGAATTCAAGTTCATGAACGTGAAGAGGGCGGTACTGGTCTGCCGGGTCGTGGCGGGACGAGTCGGGTGTGAAGAGGACGATGCGGATAAAGAGGACGGTGGGTTTGACTCCGTCGTCGGAAGGAAAGGGGGCGGGACCCACGTCAGGTTGGACGAAGAGGAATTGCTGGTGTTTAATCCGACCGCTGTGCTTCCTTGCTTTGTCATCGTCTACGGCGTCTGA 1101 48.86 MATKIASFFIKFFSLLILLLHVGCFILTTPTRNRHSRKQIPPSKSKHSYCFFKPYKAFSFLKNLCSSSTETRRSIIQTPPSTPSQLSHQSTVLLKLDSSDSLIKRPTGSSLDSDISAENPFSPLRNDIFPCTACGEIFPKPGLLEQHQAIKHAVSELTDGDTGKNIVQIIFKTGWTSSEKNPKISRILKIHNSQQILSRFEEYRETVKIKAARNTSVRRRDERCIADGNELLRFHCSTFVCDLGVNGNSSICSQQFCNVCEIIKSGFSPKLDGISTLSNSWRAHVSMPEEVEEEFKFMNVKRAVLVCRVVAGRVGCEEDDADKEDGGFDSVVGRKGGGTHVRLDEEELLVFNPTAVLPCFVIVYGV 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14887511 14888611 + Bpe023514.2 Bpe08g01394 108270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01394 366 SUPERFAMILY ADP-ribosylation 155 365 - -
Bpe08g01394 366 PANTHER NUCLEIC ACID BINDING PROTEIN 3 365 - -
Bpe08g01394 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 129 157 IPR013087 -
Bpe08g01394 366 Gene3D - 154 365 - -
Bpe08g01394 366 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 365 - -
Bpe08g01394 366 ProSitePatterns Zinc finger C2H2 type domain signature. 131 152 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01394 Bpe11g00729 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01394 Bpe-Chr8:14887511 Bpe09g00200 Bpe-Chr9:1397029 1.26E-51 dispersed
Bpe11g00729 Bpe-Chr11:5568109 Bpe08g01394 Bpe-Chr8:14887511 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21821 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01394 - - qlo:115989317 476.478