Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01418 ATGGGTACCGCGATTTGCATGAATGCTTCTTGTGGGGTGACCACCTACAACGACGGCAAGAGAGGATGGCCTCTACGATCCGGCGGATTTGCACTTCTGTGCCATAAGTGCGGATCTGCTTATGAGAGTTTAATATTCTGTGACACGTTTCACTTAGAAGAAACTGGTTGGAGGGATTGCAGTTTATGTGGCAGGCATATCCACTGTGGATGTATAGCCTCTAAGTCTTTGTTTGAGTGCCTTGATTATGGGGGCGTTGGTTGTATTACCTGCATGAAAGGTTCTCAATTTCATCTGATTCAGAGGGGTGAAGTTCCCAATGGATTTGGTACATTGATGACGATGCAAAATGTTGGTGATTTTCAGTCTACTTCAGTTGAAAATAGTGTTAATGGTGATATTGGTGATGAAAATCTTTTGCAGTTGTGTAAAATTGTTGAGGCCAATGGAAACAGCCTCCTATCCCCATCTCGGAGAGTTGACATAAGTGCATCTCTTGGTCAAAGCATGAGAGAAAACAATATGAGCACATTTGGAGAAGCTGGCACACGCTCTTCAAATGTTATACAATCATCTCTTAAATCATCACCATATGAAAATCCTGACTGTAGTAAATTCTTCACAGAGGTTAAAAACATTGAAGAATCTCTTGCTCAACCATCCTTAAGTATGAATTTAGGTGCTCCATCGACATTGCGTAACTTGGTGCTTCCGTTTTCTTGTGGAGCTGTAGAAGCGAGAGAACAGGGAAAGGTACCATATCCTTTTCAACAGAGCCAAAGATCTCGCCAATTATTGCCTAAGCCACTGAAAAGCAGCGTTACTCCTACAAATTCAGAGGCAAACAAGACCATGATTCGTCATTTGCGAATTGCTAGACCTCCTGCCGAAGGGCGTGGAAAGAACCAACTACTTCCCCGATACTGGCCAAGGATTACAGATCAAGAGCTGGAGCAACTGTCTGGAGACTTGAATTCCACGATTGTCCCACTATTTGAAAAGGTGTTGAGTGCTAGTGATGCTGGTCGTATTGGTCGTTTAGTTCTTCCCAAAGCATGTGCTGAAGCTTATTTTCCTCCTATTTCTCAATCAGAAGGTCTTCCAATAAGGATTCAAGATGTGAAGGGAAATGAGTGGACATTTCAGTTCAGATTTTGGCCAAACAACAACAGTAGGATGTATGTTTTGGAGGGTGTTACTCCTTGCATACAGTCTATGCAATTACGAGCTGGTGATACTGTCATCTTTAGCCGGATAGATCCTGAAGGCAAACTTGTCATGGGGTTTCGAAAAGCAGCAAACTCTATAGATCTGCAGAGATCATACACACAGGATGGTCAGGCCCCTGTCCTTGCGAATGGTTCTCACTTTGGCGAACCATCATTTTCTAGCATCATGGATAATTTGCAAACTGAAGGTGGTTCGCCATTAACAGATGGAGATTTGCACAAGTTAGAGAACCATGGGAATAGCACAAATGACAACCAACTGCAGCAACAAACGCCAGTTGTGGAGAAGAAAAAAGCTCGAAACATAGGGCCAAAAAATAAGAGGTTGCTCATGCATAGTGAGGATGCCCTGGAATTGAGACTGACATGGGAAGAAGCACAGGACTTACTTCGGCCACCACCGAGGGCAAAGCCTAGCATTATTACCATTGAGGACCATGAATTTGAAGAGTATGATGAACCTCCTATTTTTGGTAAGAGGACGATATTCACTGCTGACTCATCCAATAGGAGTCAGGAGCAATGGGCTCAGTGTGATGACTGCTCAAAATGGCGAAAATTGCCTGTTGATGTTCTTCTGCCTTCAAAGTGGACGTGTTTGGATAACATTTGGGATTCTAACAGGTGTTCATGTTCTGAACCAGAAGAAATAAATCCAAAGGAATTGCACAATCTTCTCAGAGCAAAAAAAGACCATACAAAGAGAAGAATAATGGAAAAGCAGGAGCCATCTCTTGAAGTTGAGGCATCTGGATTAGATGCTCTGGCGAGTGCTGCAGTTCTAGGAGATTATGTGGGTAACTTGCTTGAGCCAGCAGTTGGAGCTACCACTAAACATCCCCGACATCGCCCAGGATGCAGTTGCATTGTGTGTATTCAGCCACCGAGTGGGAAGGGAAAACATAAAACCACATGCACATGCAATGTATGTCTAACTGTAAAGCGGCGTTTTAAGACCCTAATGTTACGAAAGAAGAAACGGCAATCAGAATGTAAGTCAGAGAAAGAAGTAGACGTGGATGGTGGCGTATACAGAGATGCAGCCGTGCAGGCAAATGAGTCGGCCAACCAAGAAAGGCAGAGCAGAACGGAAGGTGATGCGGGTGAAAGTAGCAACGGAAAAATAGACTTGAATTGCGACCCAGATCGAGAAGAGGTGCGAGAAGAGGCGATGGGGGGGATCAAGCCCTGTTCAATCCGACAGCCTACCCTTGGATAG 2448 44.24 MGTAICMNASCGVTTYNDGKRGWPLRSGGFALLCHKCGSAYESLIFCDTFHLEETGWRDCSLCGRHIHCGCIASKSLFECLDYGGVGCITCMKGSQFHLIQRGEVPNGFGTLMTMQNVGDFQSTSVENSVNGDIGDENLLQLCKIVEANGNSLLSPSRRVDISASLGQSMRENNMSTFGEAGTRSSNVIQSSLKSSPYENPDCSKFFTEVKNIEESLAQPSLSMNLGAPSTLRNLVLPFSCGAVEAREQGKVPYPFQQSQRSRQLLPKPLKSSVTPTNSEANKTMIRHLRIARPPAEGRGKNQLLPRYWPRITDQELEQLSGDLNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPIRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVIFSRIDPEGKLVMGFRKAANSIDLQRSYTQDGQAPVLANGSHFGEPSFSSIMDNLQTEGGSPLTDGDLHKLENHGNSTNDNQLQQQTPVVEKKKARNIGPKNKRLLMHSEDALELRLTWEEAQDLLRPPPRAKPSIITIEDHEFEEYDEPPIFGKRTIFTADSSNRSQEQWAQCDDCSKWRKLPVDVLLPSKWTCLDNIWDSNRCSCSEPEEINPKELHNLLRAKKDHTKRRIMEKQEPSLEVEASGLDALASAAVLGDYVGNLLEPAVGATTKHPRHRPGCSCIVCIQPPSGKGKHKTTCTCNVCLTVKRRFKTLMLRKKKRQSECKSEKEVDVDGGVYRDAAVQANESANQERQSRTEGDAGESSNGKIDLNCDPDREEVREEAMGGIKPCSIRQPTLG 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14981731 14988682 + Bpe023532.1 Bpe08g01418 108294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01418 815 CDD B3_DNA 330 431 IPR003340 GO:0003677
Bpe08g01418 815 MobiDBLite consensus disorder prediction 786 801 - -
Bpe08g01418 815 ProSiteProfiles B3 DNA-binding domain profile. 332 433 IPR003340 GO:0003677
Bpe08g01418 815 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 801 - -
Bpe08g01418 815 Gene3D - 310 437 IPR015300 -
Bpe08g01418 815 ProSiteProfiles Zinc finger CW-type profile. 579 629 IPR011124 GO:0008270
Bpe08g01418 815 Pfam B3 DNA binding domain 332 431 IPR003340 GO:0003677
Bpe08g01418 815 MobiDBLite consensus disorder prediction 489 505 - -
Bpe08g01418 815 MobiDBLite consensus disorder prediction 461 509 - -
Bpe08g01418 815 MobiDBLite consensus disorder prediction 461 475 - -
Bpe08g01418 815 MobiDBLite consensus disorder prediction 759 815 - -
Bpe08g01418 815 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 4 801 - -
Bpe08g01418 815 Gene3D - 574 628 - -
Bpe08g01418 815 Pfam CW-type Zinc Finger 584 627 IPR011124 GO:0008270
Bpe08g01418 815 SUPERFAMILY DNA-binding pseudobarrel domain 329 435 IPR015300 -
Bpe08g01418 815 SMART B3_2 332 432 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01305 Bpe-Chr4:19439464 Bpe08g01418 Bpe-Chr8:14981731 0 dispersed
Bpe08g00350 Bpe-Chr8:2094853 Bpe08g01418 Bpe-Chr8:14981731 0 dispersed
Bpe08g01418 Bpe-Chr8:14981731 Bpe10g00947 Bpe-Chr10:15006814 5.45E-14 dispersed
Bpe08g01418 Bpe-Chr8:14981731 Bpe04g01510 Bpe-Chr4:21609092 3.41E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21823 PF02362 B3 3.20E-16 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01418 - - pvy:116138510 1025.0