Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g01418 | ATGGGTACCGCGATTTGCATGAATGCTTCTTGTGGGGTGACCACCTACAACGACGGCAAGAGAGGATGGCCTCTACGATCCGGCGGATTTGCACTTCTGTGCCATAAGTGCGGATCTGCTTATGAGAGTTTAATATTCTGTGACACGTTTCACTTAGAAGAAACTGGTTGGAGGGATTGCAGTTTATGTGGCAGGCATATCCACTGTGGATGTATAGCCTCTAAGTCTTTGTTTGAGTGCCTTGATTATGGGGGCGTTGGTTGTATTACCTGCATGAAAGGTTCTCAATTTCATCTGATTCAGAGGGGTGAAGTTCCCAATGGATTTGGTACATTGATGACGATGCAAAATGTTGGTGATTTTCAGTCTACTTCAGTTGAAAATAGTGTTAATGGTGATATTGGTGATGAAAATCTTTTGCAGTTGTGTAAAATTGTTGAGGCCAATGGAAACAGCCTCCTATCCCCATCTCGGAGAGTTGACATAAGTGCATCTCTTGGTCAAAGCATGAGAGAAAACAATATGAGCACATTTGGAGAAGCTGGCACACGCTCTTCAAATGTTATACAATCATCTCTTAAATCATCACCATATGAAAATCCTGACTGTAGTAAATTCTTCACAGAGGTTAAAAACATTGAAGAATCTCTTGCTCAACCATCCTTAAGTATGAATTTAGGTGCTCCATCGACATTGCGTAACTTGGTGCTTCCGTTTTCTTGTGGAGCTGTAGAAGCGAGAGAACAGGGAAAGGTACCATATCCTTTTCAACAGAGCCAAAGATCTCGCCAATTATTGCCTAAGCCACTGAAAAGCAGCGTTACTCCTACAAATTCAGAGGCAAACAAGACCATGATTCGTCATTTGCGAATTGCTAGACCTCCTGCCGAAGGGCGTGGAAAGAACCAACTACTTCCCCGATACTGGCCAAGGATTACAGATCAAGAGCTGGAGCAACTGTCTGGAGACTTGAATTCCACGATTGTCCCACTATTTGAAAAGGTGTTGAGTGCTAGTGATGCTGGTCGTATTGGTCGTTTAGTTCTTCCCAAAGCATGTGCTGAAGCTTATTTTCCTCCTATTTCTCAATCAGAAGGTCTTCCAATAAGGATTCAAGATGTGAAGGGAAATGAGTGGACATTTCAGTTCAGATTTTGGCCAAACAACAACAGTAGGATGTATGTTTTGGAGGGTGTTACTCCTTGCATACAGTCTATGCAATTACGAGCTGGTGATACTGTCATCTTTAGCCGGATAGATCCTGAAGGCAAACTTGTCATGGGGTTTCGAAAAGCAGCAAACTCTATAGATCTGCAGAGATCATACACACAGGATGGTCAGGCCCCTGTCCTTGCGAATGGTTCTCACTTTGGCGAACCATCATTTTCTAGCATCATGGATAATTTGCAAACTGAAGGTGGTTCGCCATTAACAGATGGAGATTTGCACAAGTTAGAGAACCATGGGAATAGCACAAATGACAACCAACTGCAGCAACAAACGCCAGTTGTGGAGAAGAAAAAAGCTCGAAACATAGGGCCAAAAAATAAGAGGTTGCTCATGCATAGTGAGGATGCCCTGGAATTGAGACTGACATGGGAAGAAGCACAGGACTTACTTCGGCCACCACCGAGGGCAAAGCCTAGCATTATTACCATTGAGGACCATGAATTTGAAGAGTATGATGAACCTCCTATTTTTGGTAAGAGGACGATATTCACTGCTGACTCATCCAATAGGAGTCAGGAGCAATGGGCTCAGTGTGATGACTGCTCAAAATGGCGAAAATTGCCTGTTGATGTTCTTCTGCCTTCAAAGTGGACGTGTTTGGATAACATTTGGGATTCTAACAGGTGTTCATGTTCTGAACCAGAAGAAATAAATCCAAAGGAATTGCACAATCTTCTCAGAGCAAAAAAAGACCATACAAAGAGAAGAATAATGGAAAAGCAGGAGCCATCTCTTGAAGTTGAGGCATCTGGATTAGATGCTCTGGCGAGTGCTGCAGTTCTAGGAGATTATGTGGGTAACTTGCTTGAGCCAGCAGTTGGAGCTACCACTAAACATCCCCGACATCGCCCAGGATGCAGTTGCATTGTGTGTATTCAGCCACCGAGTGGGAAGGGAAAACATAAAACCACATGCACATGCAATGTATGTCTAACTGTAAAGCGGCGTTTTAAGACCCTAATGTTACGAAAGAAGAAACGGCAATCAGAATGTAAGTCAGAGAAAGAAGTAGACGTGGATGGTGGCGTATACAGAGATGCAGCCGTGCAGGCAAATGAGTCGGCCAACCAAGAAAGGCAGAGCAGAACGGAAGGTGATGCGGGTGAAAGTAGCAACGGAAAAATAGACTTGAATTGCGACCCAGATCGAGAAGAGGTGCGAGAAGAGGCGATGGGGGGGATCAAGCCCTGTTCAATCCGACAGCCTACCCTTGGATAG | 2448 | 44.24 | MGTAICMNASCGVTTYNDGKRGWPLRSGGFALLCHKCGSAYESLIFCDTFHLEETGWRDCSLCGRHIHCGCIASKSLFECLDYGGVGCITCMKGSQFHLIQRGEVPNGFGTLMTMQNVGDFQSTSVENSVNGDIGDENLLQLCKIVEANGNSLLSPSRRVDISASLGQSMRENNMSTFGEAGTRSSNVIQSSLKSSPYENPDCSKFFTEVKNIEESLAQPSLSMNLGAPSTLRNLVLPFSCGAVEAREQGKVPYPFQQSQRSRQLLPKPLKSSVTPTNSEANKTMIRHLRIARPPAEGRGKNQLLPRYWPRITDQELEQLSGDLNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPIRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLRAGDTVIFSRIDPEGKLVMGFRKAANSIDLQRSYTQDGQAPVLANGSHFGEPSFSSIMDNLQTEGGSPLTDGDLHKLENHGNSTNDNQLQQQTPVVEKKKARNIGPKNKRLLMHSEDALELRLTWEEAQDLLRPPPRAKPSIITIEDHEFEEYDEPPIFGKRTIFTADSSNRSQEQWAQCDDCSKWRKLPVDVLLPSKWTCLDNIWDSNRCSCSEPEEINPKELHNLLRAKKDHTKRRIMEKQEPSLEVEASGLDALASAAVLGDYVGNLLEPAVGATTKHPRHRPGCSCIVCIQPPSGKGKHKTTCTCNVCLTVKRRFKTLMLRKKKRQSECKSEKEVDVDGGVYRDAAVQANESANQERQSRTEGDAGESSNGKIDLNCDPDREEVREEAMGGIKPCSIRQPTLG | 815 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 14981731 | 14988682 | + | Bpe023532.1 | Bpe08g01418 | 108294 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g01418 | 815 | CDD | B3_DNA | 330 | 431 | IPR003340 | GO:0003677 | |
Bpe08g01418 | 815 | MobiDBLite | consensus disorder prediction | 786 | 801 | - | - | |
Bpe08g01418 | 815 | ProSiteProfiles | B3 DNA-binding domain profile. | 332 | 433 | IPR003340 | GO:0003677 | |
Bpe08g01418 | 815 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 | 4 | 801 | - | - | |
Bpe08g01418 | 815 | Gene3D | - | 310 | 437 | IPR015300 | - | |
Bpe08g01418 | 815 | ProSiteProfiles | Zinc finger CW-type profile. | 579 | 629 | IPR011124 | GO:0008270 | |
Bpe08g01418 | 815 | Pfam | B3 DNA binding domain | 332 | 431 | IPR003340 | GO:0003677 | |
Bpe08g01418 | 815 | MobiDBLite | consensus disorder prediction | 489 | 505 | - | - | |
Bpe08g01418 | 815 | MobiDBLite | consensus disorder prediction | 461 | 509 | - | - | |
Bpe08g01418 | 815 | MobiDBLite | consensus disorder prediction | 461 | 475 | - | - | |
Bpe08g01418 | 815 | MobiDBLite | consensus disorder prediction | 759 | 815 | - | - | |
Bpe08g01418 | 815 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 | 4 | 801 | - | - | |
Bpe08g01418 | 815 | Gene3D | - | 574 | 628 | - | - | |
Bpe08g01418 | 815 | Pfam | CW-type Zinc Finger | 584 | 627 | IPR011124 | GO:0008270 | |
Bpe08g01418 | 815 | SUPERFAMILY | DNA-binding pseudobarrel domain | 329 | 435 | IPR015300 | - | |
Bpe08g01418 | 815 | SMART | B3_2 | 332 | 432 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01305 | Bpe-Chr4:19439464 | Bpe08g01418 | Bpe-Chr8:14981731 | 0 | dispersed | |
Bpe08g00350 | Bpe-Chr8:2094853 | Bpe08g01418 | Bpe-Chr8:14981731 | 0 | dispersed | |
Bpe08g01418 | Bpe-Chr8:14981731 | Bpe10g00947 | Bpe-Chr10:15006814 | 5.45E-14 | dispersed | |
Bpe08g01418 | Bpe-Chr8:14981731 | Bpe04g01510 | Bpe-Chr4:21609092 | 3.41E-15 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21823 | PF02362 | B3 | 3.20E-16 | CL0405 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g01418 | - | - | pvy:116138510 | 1025.0 |