Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01445 ATGAAGCTTGAGCTTAAGAAAGTGGTTTATTTATTGAGTGTTACACTAATGGTGCTCTTTCCTGCACTAAGTTTCTCTCAAGACACCTTTATCCCTTCTAGAGCCTCCTTCTATGGTAGCCCTGATTGCTATGGAACTCCAACGGGAGCTTGTGGCTTTGGTGAGTTCGGAAGAACTGTGAACGATGGGAATGTGGGTGCAGTTTCAAGGCTTTATAGAAACGGTACTGGCTGCGGTGCGTGCTATCAGGTCAGGTGCAAGGTACCAAAATGCTGCAGTAACGACGGGGTGACGGTGGTGGTGACCGACTACGGCGAGGGAGATCACACCGACTTCATTTTCAGCCCCAGAGCTTTCACCAAATTGGCCGATCCAAACGCTGCCACGGAGCTGTTCTCATACGGCGTGGTGGACGTAGAATACAGAAGAGTTCCCTGCCAATACAGCGGATACAACGTGAAATTCAAGGTCCAACCACACAGCAACTTTCCAGACTACTTGGCCATTGTGATCATGTATGTCTCTGGTCAGAATGATATCACAGCCGTCGAATTGTGGCAGGAGGATTGCAAGGAGTGGAGGGGAATGAGGAGGGCATATGGAGGAGTGTGGGACATGGCTAACCCACCCAGAGGAGACGTCAATTTGAGGTTCCAAGTTTATGGGAACGGAGGGTTGAAGTGGGTTCAAGCTTTCAATGTTATTCCAAGCAATTGGAAGGCAGGCTACGTTTATGACACCAACATTCTACTAAATTAA 759 48.48 MKLELKKVVYLLSVTLMVLFPALSFSQDTFIPSRASFYGSPDCYGTPTGACGFGEFGRTVNDGNVGAVSRLYRNGTGCGACYQVRCKVPKCCSNDGVTVVVTDYGEGDHTDFIFSPRAFTKLADPNAATELFSYGVVDVEYRRVPCQYSGYNVKFKVQPHSNFPDYLAIVIMYVSGQNDITAVELWQEDCKEWRGMRRAYGGVWDMANPPRGDVNLRFQVYGNGGLKWVQAFNVIPSNWKAGYVYDTNILLN 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15202554 15204029 + Bpe023558.1 Bpe08g01445 108321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01445 252 SUPERFAMILY PHL pollen allergen 152 246 IPR036749 -
Bpe08g01445 252 PANTHER EXPANSIN-LIKE B1 11 251 - -
Bpe08g01445 252 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Bpe08g01445 252 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Bpe08g01445 252 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Bpe08g01445 252 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Bpe08g01445 252 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Bpe08g01445 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 247 IPR007117 -
Bpe08g01445 252 PANTHER EXPANSIN-B3 11 251 - -
Bpe08g01445 252 SMART dpbb_1 65 141 IPR007112 -
Bpe08g01445 252 Gene3D - 21 146 IPR036908 -
Bpe08g01445 252 Pfam Expansin C-terminal domain 153 236 IPR007117 -
Bpe08g01445 252 Pfam Lytic transglycolase 69 141 IPR009009 -
Bpe08g01445 252 Gene3D - 147 248 IPR036749 -
Bpe08g01445 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 151 IPR007112 -
Bpe08g01445 252 SUPERFAMILY Barwin-like endoglucanases 17 150 IPR036908 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01445 Bpe-Chr8:15202554 Bpe11g00625 Bpe-Chr11:4802085 4.16E-54 dispersed
Bpe08g01445 Bpe-Chr8:15202554 Bpe15g00792 Bpe-Chr15:18164351 7.63E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01445 - - csin:114321117 369.392