Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01446 ATGGGCAAGCATGGACCTTGCTATCACTGTGGAGTGACAAGCACTCCCTTGTGGCGCAACGGGCCTCCTGATAAGCCAGTATTGTGCAATGCATGTGGATCACGATGGAGGACTAAGGGAACTCTTGCAAACTATACCCCTCTCCACTCTAGGATGTATCCTGATGACTATGAAGATCAAAAGGCTTGTAAGGAGAAGATAATATCTATAAATAAAAACAAAGAAGGGAAAACACTAAAACATAAGCATAATCATGAAAACATGATGGTTGGAATGGTAATTTCCAACCAAAGTCATGGTTTCTGGAAGACAATGGATGAAGATATAAGCAATAGATCAAGCTCAGGGTCAGCATTATCTAACTCAGACAGCTGTGTGCAATTTGGTAGTGCCGAGGCTAGTGATTTGACAGGTCCAGCTCAGTCTGTTGTTTGGGATTCAACGGTGCCTTCGAAAAAGAGGACTTGTGCGGGTCGACCTAAGCAATCATCAGTAGAGAAACTTACAAAAGATCTATGTACTATTTTACATGAACAACAATCTTCTTATTTCTCTGGATCATCCGAGGAAGATTTACTTTTCGAGACTGAAAAACCTATGGTCTCTGTTGAGATAGGACATGGAAGTGTTTTAATTAGACATCCCAGCTTAATTGCCCGAGAAGAGGAATCTGAGGCTAGCTCGCTCTCTGTTGATAATAAATATTGTTCTGTCAATGAAATGTATTCCAATTCTTTAACTCTTAATCACCACAACAATAACAAGAATGTCAACTTTTTAACTCCTGGAACTCAAAGGATGAAGAACCCTGCTGGGAAAGAGGTGCATCAAGAACAAATCAAAGGGGACAAGTCTCACCATGAAAAATTACTAGTTCTTGGAAATCGCAACTCACCTCTATGCGATATAGATCTAAATGATGTTCTAAATTTTGAGGAGTTTACGAGACAATTGACGAGTGAAGAGCAACAACAATTGACGAAGTATCTTCCTCTTGTTGATGCTGCTGAATGTCCTGACAGCCTCAAGGATATGTTTGATAGCTCACAATTCAAGGAGAATTTTACTTTCTTCCAGCAACTGCTAGCAGAAGGTATCTTCGATAACTCTTTTTCAGGACCTAAAATTGAAGACTGCAAAATGCTTAGAAGATTCGCCTTATTTGATTTGTCCAAATCCAAGTGGGTGAAACGATACAATCTGCTTAAGAAGTGTAAGAACAGTAGTAGAGTGTCTATTGTTTCAGAAGATAATTCCATGGCGTTAAGTAATATTATTAGCATGAAGAGGTCTCGTGATTCCCAAAGTAAAAAATTTCCAGAGATGAAGACTATCATGAAGAGTTCAAAAACGGTGGCAGTGAAGTCCGATCTCGGAGACAATGATGGTTTTTGTTTTAGCCCAAGAACCTTATTTGCTGTACCTCCAGACGGGAGCTCTCTTGTTCTTGAAACTCTAAATTTTGCAGAAGACAGTTACGAACAAGATCTTCTTCTCGAAGTTCGGCCGAATAATTCCTTCCCTCAGGCAGAGCTTCTCCATCTGTCTTCAAGCTTTGGAGCTCAACAAGCAAGCACTTGCAGTAGCTCGAATTCTCATATTGCACGACAGTGA 1614 40.21 MGKHGPCYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGTLANYTPLHSRMYPDDYEDQKACKEKIISINKNKEGKTLKHKHNHENMMVGMVISNQSHGFWKTMDEDISNRSSSGSALSNSDSCVQFGSAEASDLTGPAQSVVWDSTVPSKKRTCAGRPKQSSVEKLTKDLCTILHEQQSSYFSGSSEEDLLFETEKPMVSVEIGHGSVLIRHPSLIAREEESEASSLSVDNKYCSVNEMYSNSLTLNHHNNNKNVNFLTPGTQRMKNPAGKEVHQEQIKGDKSHHEKLLVLGNRNSPLCDIDLNDVLNFEEFTRQLTSEEQQQLTKYLPLVDAAECPDSLKDMFDSSQFKENFTFFQQLLAEGIFDNSFSGPKIEDCKMLRRFALFDLSKSKWVKRYNLLKKCKNSSRVSIVSEDNSMALSNIISMKRSRDSQSKKFPEMKTIMKSSKTVAVKSDLGDNDGFCFSPRTLFAVPPDGSSLVLETLNFAEDSYEQDLLLEVRPNNSFPQAELLHLSSSFGAQQASTCSSSNSHIARQ 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15207547 15213331 - Bpe023559.1 Bpe08g01446 108322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01446 537 PANTHER GATA TRANSCRIPTION FACTOR 26 1 532 - -
Bpe08g01446 537 CDD ZnF_GATA 6 51 IPR000679 GO:0006355|GO:0043565
Bpe08g01446 537 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 296 405 IPR044867 -
Bpe08g01446 537 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 47 - -
Bpe08g01446 537 Gene3D - 294 378 IPR038108 -
Bpe08g01446 537 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Bpe08g01446 537 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Bpe08g01446 537 Pfam Asx homology domain 284 369 IPR028020 -
Bpe08g01446 537 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Bpe08g01446 537 PANTHER OSJNBB0038F03.10 PROTEIN 1 532 IPR044589 -
Bpe08g01446 537 Gene3D - 4 86 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00554 Bpe-Chr5:19678070 Bpe08g01446 Bpe-Chr8:15207547 3.27E-170 dispersed
Bpe08g01446 Bpe-Chr8:15207547 Bpe06g00027 Bpe-Chr6:313581 3.10E-08 dispersed
Bpe08g01446 Bpe-Chr8:15207547 Bpe07g00195 Bpe-Chr7:1343258 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21829 PF13919 ASXH 2.40E-08 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01446 - - zju:107407398 693.73