Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01463 ATGGACGGCCATTCTCTTCCATTCCCTTTTCACACCAGAGGCTTTCACCAGGAGCAGCATCAATTTCAAACCTCGGAGAACGAACAAACTGGAAGCAGTGGACTAAACAACAGAACCCAGATCAAGCGAGACCGGGATGAGAGTATTGAGGACTCTGGCGCTGGAGAAAGCAGCAAGGAGGGCGGCACAGGTGGTGGAGAAGGCGAGATGACCAGAAGGCCGCGAGGCCGACCCGCTGGTTCAAAAAACAAGCCGAAGCCGCCCATCATCATCACCCGCGACAGTGCCAACGCCCTTCGGACCCACGTCATCGAGGTCACTGACGGCTGTGACATCGTCGAGAGCATTGCCACCTTCGCCCGTCGCCGGCAGCGTGGGCTCTGCATCATGAGCGGTACCGGCACTGTCATGAACGTGTCAATAAGACAGCCATCATCTCTCAGCGCAATTGTCAATTTACACGGCCGATTTGAAATTCTTTCTCTCGCCGGATCTTTTCTCCCTCCTCCTGCACCGCCGGCGGCTACGAGCTTGACAATTTACTTAGCTGGAGGGCAAGGGCAGGTGGTCGGTGGAAGCGTCGTCGGAACCCTAATTGCCTCCGGCCCAGTTGTCATAATGGCGGCTTCGTTTAGCAACGCAGCATACGAGAGGCTTCCTCTCGACGAAGATGATCCGCTGTTGCCGATGCCAGGCGGTGGTTTAGGGTCGCCTGGTGAAGTACCTGATCAACAACAACTGCAGCAGCAGCAACAACAACTTTTAGCAGATTCCAATGTTGCAAATTTATTTCATGGGTTGCCTCCTAATCTTCTCAACTCCATTCAGTTGCCTAACGAAGGGTATTGGGCAACTGGCCGACCACCAAACTGA 873 54.41 MDGHSLPFPFHTRGFHQEQHQFQTSENEQTGSSGLNNRTQIKRDRDESIEDSGAGESSKEGGTGGGEGEMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDIVESIATFARRRQRGLCIMSGTGTVMNVSIRQPSSLSAIVNLHGRFEILSLAGSFLPPPAPPAATSLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLDEDDPLLPMPGGGLGSPGEVPDQQQLQQQQQQLLADSNVANLFHGLPPNLLNSIQLPNEGYWATGRPPN 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15334411 15335283 - Bpe023575.1 Bpe08g01463 108339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01463 290 MobiDBLite consensus disorder prediction 222 245 - -
Bpe08g01463 290 MobiDBLite consensus disorder prediction 16 38 - -
Bpe08g01463 290 MobiDBLite consensus disorder prediction 1 90 - -
Bpe08g01463 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Bpe08g01463 290 Gene3D - 99 226 - -
Bpe08g01463 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 230 - -
Bpe08g01463 290 MobiDBLite consensus disorder prediction 39 54 - -
Bpe08g01463 290 ProSiteProfiles PPC domain profile profile. 96 233 IPR005175 -
Bpe08g01463 290 PIRSF ESCAROLA 11 289 IPR014476 GO:0003680
Bpe08g01463 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 3 289 - -
Bpe08g01463 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 289 IPR014476 GO:0003680
Bpe08g01463 290 CDD DUF296 100 167 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00142 Bpe-Chr7:1007613 Bpe08g01463 Bpe-Chr8:15334411 1.01E-114 dispersed
Bpe08g01463 Bpe-Chr8:15334411 Bpe14g00904 Bpe-Chr14:6741793 1.21E-98 dispersed
Bpe11g00699 Bpe-Chr11:5379086 Bpe08g01463 Bpe-Chr8:15334411 2.74E-160 wgd
Bpe05g00608 Bpe-Chr5:20055925 Bpe08g01463 Bpe-Chr8:15334411 1.97E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01463 - - vvi:100265031 352.829