Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01480 ATGCGCATTACCCACCCCTCCCCCGGTGAGGCTCCGGCGAGGTCGGGAGATCGGCCAGAGTATGCTGAGAGAGGTTACATCGACTTGATGGATCGGTGCCAGAATTTGGAGGCTGGCCACGATTTGCTCAGAGAGCAGATGGATAAGCTGCTGACGAAAAAGGAGGAGCATAGTCTGATGAAGGGTGGGGCAGAGAAGGAAAATTCTGGTCAAGTAACTATCCCGGGATTCTTTAGAGATGGTCGTCCGTACAAGAAGATTTTGGATTCCATGGGTCACGCTGTTCTTGTATTTAGAACGACCTCTTGGGAAATCTTATACTGGAATCGCCCAGCTGAAAACCTCTATGGATGGAAGGCCTATGAAGTCATTGGACAGAGGGTTTCCGAAGTTCTCATTGCACAAGAATACTACCCACTACTTATGAAAGTCATGGAAGGATTAAGCACAGGACAGCAATGGTCAGGTCAATTTCCTTTCAAGAAACGCTCTGGCGAAATATTTATGGCAATGGTGACTCAAACTCCATTTTATGAGGATGGCAAGATGGTTGGCATTATAACTGTTTCAAGTGATGCAGCTTTATTCAATACTGTAGCATCAGAAAGTCTGAGGAGATGCCAAGAAAATGCAAACAGTCAAAGAGAATGGAATTCAAACTGGAAGAATATCCCCAAGCAACAGCAGTTGCCATTTTTACCACTGGCTCAATTTGCATCATCTGTTTCCAATCTGGCCTCGAAACTTAGATTGGGGGGACAAGAAGAATCATGCAATTCAAAAGACAAGTCTAGAGAAAAAGATAATATTGCTGCAGCTGAGTTTGAGAAACTTGGGACACTAGTGAGTGTCTTAGCAAAGCTAAACATTGGAGGTAATAGGAAGCATGGAAAAGAAGATGATAATATCCAACAAGATGGTCCAACTGATACTCCATTACCCAATGATGAGTTAAAGGAGCTCCCTCGTAGAAATTTGAAGACATCAAAGGAGTGGTATAAGGACATTTCATTCGAAACTTCTTCAAAGAACTCCAGAAATGGTTGCAATTTAGCGATACCCGGAGATTCGTCTCCAGGTTCAGGCTCTCAAGTGGATTCTAAGTTGATAAAGGATGTGAATGAAATGCATGCTTTGAACAAGGACTTTAGAGGTCCACGAAAGAGGGATGTTAATCATTTTGCAACTTCCGAGGTGATCATGAGCAGCCATGGAAGTACAGGAGAACAAGAATATGAGATTTTATGGGAAGACATTCAGTTAGGGGAGGAGATTGGACAAGGTTCCTCAGCTATTGTTTATCGTGGACTATGGAATGGATCGGACGTAGCCGTTAAGGTTTACTTTGTAAACGATTATAGCGAGGGGACTTTGGAGGACTACAGAAAAGAGGTTGCTATAATGAAGAAACTAAGACACCCTAATGTGTTGTTGTACATGGGAGCGGTGTATTCGCCGGAAAGACACACAATTGTCACAGAGTTTTTACCCAGGGGAAGTCTCTTTAAAATACTTCACAAGAACAATCAAACATTGGACATTAAAAGACGTTTGAGGATGGCCCTTGATGTTGCCAGAGGAATGAATTATTTGCACCGTAGGAGTCCGCCGATCATACATAGAGATCTTAAATCTTCCAATCTGCTTGTTGATAAAATGTGGTCGGTGAAGGTTGGAGATTTTGGGCTGTCTAAATTAAAAGATGCAACATTTTTCATGACAAAATCGGGGAAAGGAACGCCCCAATGGATGGCTCCCGAAATCCTTCGAAATGAACCGAGCAATGAGAAATCTGACGTGTACAGTTTTGGTGTCATCCTATGGGAGCTTATGACTCGCTCTATTCCTTGGAAAAATCTCAACGCCTTACAGGTCGTTGGAGTTGTTGGCTTCATGGATAGAAGATTAGATTTACCACTAGGCCTTGACCCTCGAGTGACATCCATCATCCAAGACTGTTGGCTCAGGTACATTATACTCACGATTTTGCTCTTGCTTAACAAGAATTTTTCCGGCTTATTTTCCGTTCTCGCTGAAAAATTACAGCAACCCACTAAAGCGACCATCGTTCGAAGATATAATATGTCAAATAACAGCAATCTTACAAAATGCTGTGTAGCAGTGGAGGAAGTTTAA 2136 42.74 MRITHPSPGEAPARSGDRPEYAERGYIDLMDRCQNLEAGHDLLREQMDKLLTKKEEHSLMKGGAEKENSGQVTIPGFFRDGRPYKKILDSMGHAVLVFRTTSWEILYWNRPAENLYGWKAYEVIGQRVSEVLIAQEYYPLLMKVMEGLSTGQQWSGQFPFKKRSGEIFMAMVTQTPFYEDGKMVGIITVSSDAALFNTVASESLRRCQENANSQREWNSNWKNIPKQQQLPFLPLAQFASSVSNLASKLRLGGQEESCNSKDKSREKDNIAAAEFEKLGTLVSVLAKLNIGGNRKHGKEDDNIQQDGPTDTPLPNDELKELPRRNLKTSKEWYKDISFETSSKNSRNGCNLAIPGDSSPGSGSQVDSKLIKDVNEMHALNKDFRGPRKRDVNHFATSEVIMSSHGSTGEQEYEILWEDIQLGEEIGQGSSAIVYRGLWNGSDVAVKVYFVNDYSEGTLEDYRKEVAIMKKLRHPNVLLYMGAVYSPERHTIVTEFLPRGSLFKILHKNNQTLDIKRRLRMALDVARGMNYLHRRSPPIIHRDLKSSNLLVDKMWSVKVGDFGLSKLKDATFFMTKSGKGTPQWMAPEILRNEPSNEKSDVYSFGVILWELMTRSIPWKNLNALQVVGVVGFMDRRLDLPLGLDPRVTSIIQDCWLRYIILTILLLLNKNFSGLFSVLAEKLQQPTKATIVRRYNMSNNSNLTKCCVAVEEV 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15522659 15527196 + Bpe023592.1 Bpe08g01480 108356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01480 711 SUPERFAMILY Protein kinase-like (PK-like) 398 655 IPR011009 -
Bpe08g01480 711 PANTHER SERINE-THREONINE PROTEIN KINASE 25 268 - -
Bpe08g01480 711 MobiDBLite consensus disorder prediction 292 323 - -
Bpe08g01480 711 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 25 268 - -
Bpe08g01480 711 Coils Coil 33 53 - -
Bpe08g01480 711 Pfam Protein tyrosine and serine/threonine kinase 419 654 IPR001245 GO:0004672|GO:0006468
Bpe08g01480 711 Pfam PAS fold 84 188 IPR013767 GO:0006355
Bpe08g01480 711 TIGRFAM sensory_box: PAS domain S-box protein 84 192 IPR000014 -
Bpe08g01480 711 CDD STKc_MAP3K-like 425 654 - -
Bpe08g01480 711 Gene3D Phosphorylase Kinase; domain 1 408 496 - -
Bpe08g01480 711 CDD PAS 94 192 IPR000014 -
Bpe08g01480 711 Gene3D Transferase(Phosphotransferase) domain 1 498 662 - -
Bpe08g01480 711 Gene3D PAS domain 79 228 - -
Bpe08g01480 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Bpe08g01480 711 SMART pas_2 82 149 IPR000014 -
Bpe08g01480 711 SUPERFAMILY PYP-like sensor domain (PAS domain) 84 192 IPR035965 -
Bpe08g01480 711 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 251 655 - -
Bpe08g01480 711 MobiDBLite consensus disorder prediction 342 366 - -
Bpe08g01480 711 ProSitePatterns Protein kinases ATP-binding region signature. 425 446 IPR017441 GO:0005524
Bpe08g01480 711 ProSiteProfiles Protein kinase domain profile. 419 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g01480 711 ProSiteProfiles PAS repeat profile. 80 152 IPR000014 -
Bpe08g01480 711 PANTHER SERINE-THREONINE PROTEIN KINASE 251 655 - -
Bpe08g01480 711 SMART serkin_6 419 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01116 Bpe-Chr4:9134316 Bpe08g01480 Bpe-Chr8:15522659 1.72E-23 dispersed
Bpe08g01480 Bpe-Chr8:15522659 Bpe15g00509 Bpe-Chr15:16319146 5.01E-92 dispersed
Bpe08g01480 Bpe-Chr8:15522659 Bpe13g00378 Bpe-Chr13:11520049 1.71E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63486 PF07714 PK_Tyr_Ser-Thr 1.20E-57 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01480 - - fve:101300060 669.463