Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01484 AAAATGAGCACGTTGAATGATCGACAAAGCAGTGAACAACCATCGATTAAGTACAGGTGGAACCAAAATGCCGAGATATCCTACGAAGTGGCTGAATTATTGCATGAGGATTCTAATAACAACGATAAGCAACGCAGTAAAGCTAATGTACACGAGTCTGCTGAGATAGTGAGTACCACCCAACTTATTTCTCGGGCTTGTCAAGTGTGGGATGTTGCTCGTCGTCCTCTATCCTTTTTCCACCCCAAATCAAGTTTTAATAAGGACGAGAGAGCTTGTCAGAATGAGTTTATCTTTGGCAATCTTGCTGAAAAAGCTACTAGTAGGGACCTTACTTCCTCTGAAAAGAAAAAAATTTGTGTCAATCATGGAAATGCCGGTCATTTTACTACCCTGGTGCAGTCCAACTTTAACTCTTTTTCAGTATCACAGAAGATATCAGCATTTGAACCTTATACTGATAAATGTGTAAAGTCATCATTTCAGAAGGTTCTGCTGAGTGGTAAGGGGCTTTCAGGTATAGAAGTCTCTTATGATGTTGGGAAGACATGTGAATGTATGGGTGGATTATATAATGCTGCCAGAGTCGCAGAGTCTGGGTCTTGCACAATTGGTGAATGTGGCGCTACAGTGAGAGTAGATACTGCAAGTGAGGCGTGTATTTCATTGAATATTGATAAATTAACTAGTGAAACTGATTTGAAGAGATCTAACTCTTCGTCAGTATTGGATCTTGCAATCTCGGAGGAGGGAAAAACAATCAAATCGCCTTTGGAAACATATTACTTCCTCAACTATGTCCAAGATAGTGAAACAGATGGCAGTATTGATCTTTTAATGACATCAAGTATTTATGCAGACTACCACATTAACCCGTTCCCTTCCTGTCATGATCCATTGGAAAAGTTTGAGTGTGAAGATGATGATGATGAACTTCCGGAGATTAAAGAAAAACAAGCTAAAAACTTTATCATAGATGATAAATGCAAGACAGAAACCTTCTTGCCATCTCATGAAAGATGTCATAATTCTTTTGCAAAGCAAGAACACGCCTTTGCTGGTGCATTGGCTGGTACATGTGTCAGCCTTTGTCTACACCCAGTGGACACAATTAAAACGGTCGTTCAATCTTGCCAAGCCAAGAAGAGCTCAATCTCTTTCATTGGAAAATCAATTATTTCTGATCGAGGTTTATTTGGACTTTATAGAGGGATTGCTACCAATATTGCATCATCTGCTCCAATATCTGCTGTTTATACCTTTACATATGAATCAGTTAAAGGATCTTTGCTTCCACTTCTCCCAAGGGAGTATTACTCCTTTGCCCATTGTGTGGCAGGTGGTTGCGCAAGTGTGGCTACTTCTTTTATTTTCACTCCTAGCGAGCGCATAAAGCAGCAGATGCAAGTTAGTTCAAATTATCCCAATTGCTGGAATGCATTGATTGAAATAGTTAGAAAGGGGGGCTTTTCCTCATTATATACTGGCTGGGGAGCTGTGCTTTGCAGAAATATTCCTCACTCAATTATCAAGTTCTACACATATGAAAGCTTGAAGGAAATGATAATCCCATCAGAGCTATCTAACGCTCGTCCAAGCACATCACAAACGCTAGTTTGTGGAGGAGTTGCTGGATCTACTGCTGCTTTATTTACCACTCCTTTTGATGTTGTGAAGACAAGATTACAGACAGAGTTTCCGGGATCTAAGAGCCAATATAACAATACGATTCACGCCCTCCAAGAGATTGGAAAGAAAGAAGGCTTGAAAGGCCTCTACAGGGGACTAACTCCAAGACTGGTTATGTATATGTCTCAAGGAGCAATTTTCTTTGCATCCTATGAGTTTTTTAGGAGATGTTTGAGGCTTGAGGTGCCAAAGCATACTCTTAAATGA 1896 40.14 KMSTLNDRQSSEQPSIKYRWNQNAEISYEVAELLHEDSNNNDKQRSKANVHESAEIVSTTQLISRACQVWDVARRPLSFFHPKSSFNKDERACQNEFIFGNLAEKATSRDLTSSEKKKICVNHGNAGHFTTLVQSNFNSFSVSQKISAFEPYTDKCVKSSFQKVLLSGKGLSGIEVSYDVGKTCECMGGLYNAARVAESGSCTIGECGATVRVDTASEACISLNIDKLTSETDLKRSNSSSVLDLAISEEGKTIKSPLETYYFLNYVQDSETDGSIDLLMTSSIYADYHINPFPSCHDPLEKFECEDDDDELPEIKEKQAKNFIIDDKCKTETFLPSHERCHNSFAKQEHAFAGALAGTCVSLCLHPVDTIKTVVQSCQAKKSSISFIGKSIISDRGLFGLYRGIATNIASSAPISAVYTFTYESVKGSLLPLLPREYYSFAHCVAGGCASVATSFIFTPSERIKQQMQVSSNYPNCWNALIEIVRKGGFSSLYTGWGAVLCRNIPHSIIKFYTYESLKEMIIPSELSNARPSTSQTLVCGGVAGSTAALFTTPFDVVKTRLQTEFPGSKSQYNNTIHALQEIGKKEGLKGLYRGLTPRLVMYMSQGAIFFASYEFFRRCLRLEVPKHTLK 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15554978 15558246 + Bpe023597.1 Bpe08g01484 108360

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01484 631 ProSiteProfiles Solute carrier (Solcar) repeat profile. 532 620 IPR018108 -
Bpe08g01484 631 ProSiteProfiles Solute carrier (Solcar) repeat profile. 438 521 IPR018108 -
Bpe08g01484 631 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 2 628 - -
Bpe08g01484 631 Gene3D Mitochondrial carrier domain 438 630 IPR023395 -
Bpe08g01484 631 Gene3D Mitochondrial carrier domain 318 437 IPR023395 -
Bpe08g01484 631 SUPERFAMILY Mitochondrial carrier 348 617 IPR023395 -
Bpe08g01484 631 Pfam Mitochondrial carrier protein 349 429 IPR018108 -
Bpe08g01484 631 Pfam Mitochondrial carrier protein 534 621 IPR018108 -
Bpe08g01484 631 Pfam Mitochondrial carrier protein 440 523 IPR018108 -
Bpe08g01484 631 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 2 628 - -
Bpe08g01484 631 ProSiteProfiles Solute carrier (Solcar) repeat profile. 345 429 IPR018108 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01484 - - - mdm:114825639 603.208
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00758 Bpe-Chr7:14093954 Bpe08g01484 Bpe-Chr8:15554978 4.07E-06 dispersed
Bpe08g00739 Bpe-Chr8:8981241 Bpe08g01484 Bpe-Chr8:15554978 1.94E-116 dispersed
Bpe08g01484 Bpe-Chr8:15554978 Bpe13g00001 Bpe-Chr13:1252 2.05E-41 dispersed
Bpe08g01484 Bpe-Chr8:15554978 Bpe02g01604 Bpe-Chr2:18925594 3.08E-35 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g321 . . . . . . . . . . Cma02g01450 . Car02g01217 . . . Cpe05g00338 . . . . . . . . . . . . . . Cone8ag0303 . . . . Csa05g00280 Chy09g01229 . . . . . Bpe08g01484 . . . . Cmo02g01486 . . . . . . . Bhi12g00262 . . . . . . Cla01g00261 Cam01g0267 Cec01g0259 Cco01g0274 Clacu01g0266 Cmu01g0255 Cre09g2252 Lsi09g00256 . . Cme09g01764
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006178 1 3 1 1 1 0 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 4 6 1 37