Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01488 ATGGCTGCCAGGTTTCTGCAACTGAGCTGCACAGCTTGCAGCAGGAGAAACGACATGTCACCACAGAGGCCAAGGGAAAGAGAAGAGAACGTTGAGAGTTCTGAGAAAAAGGGGAAGGCTAAGGCCGTGTTTGGCATAAGTGGAATGACATGTTCACCATGTGCAGGCTTCATCGAAAGGTCGATCAATCGTCTTCCCGGAATTCTCGATGCATCAGTTGATTTCCTGAACGATAGAGCTCAGATCCATTACAACCCCGGCTTTGTTAATGAGGTGAGCATTCGTGGGGCTATTGAGGATGTTGGGTTCGAAGCAAGATTGTTATATGAACAAGACATCAGTAAAACCACCCAGAAATGTCAAATACGGATTGAAGGAATGACCTGCACTGCCTGTTCGACAGCAGTTGAGCAAAACTTACAAGCTATCAATGGCGTCGAAAGAGCAGCAGTCGCATTAGCAATAGAGGAGGCTGAAATTCACTACAACCCAGATATCATAAAGCCTGAAAATCTTCTTCAGTCTATTCAAGATTCTGGATTTGCACCCACACTCCTCGCCATTGGAGATCGCTCGAGCAAAATAGAACTTAAAATTGAAGGCTTGAGAACAGGTGCTTCAATGACGATAATTGAAAATTCTCTCAAATCAGTTGTTGGAATAGAAGACACAGTTGCCGACCCTACGCTCGGGAAAATCTCCATTTCTTACAGACCAGACATGGTGGGACCGAGGACATTCATTGAGGTCATCGAATCGATCAAATCTGGAGCTTTCAAAGCAACCATTTTTCCTCAAGAAAGAAGAGATTCTTACAGGGAGAAAGAAATCAAACAATATTTTCGATCTTTCTTATGGAGCTTTGCTTTTGCGATTCCTGTTTTTCTAACTTCCATGGTGTTCATGTACATTCCCACAATTGAACGAGCACTGGATACTAAAGTATGGAATATGATGAACATAGGAATGATTGTGAGGTGGGAGCTAACAACGCCAGTGCAGTTCTTCATCGGCCGGAGATTCTACGTCGGAGCCTACAAATCTCTCCGACATGGGTCCGCTAATATGGATGTTTTAGTTGCCTTAGGAACAAATGCAGCCTATTTTTACTCAGTCTATATCATAATAAGATCTGTTTCTTCCCCACATTTTGAGGGCACAGATTTTTTTGAAACCAGCACAATGCTGATTTCATTTATTCTTCTGGGGAAATACTTGGAGGTTTTGGCGAAAGGGAAGACGTCGGAAGCCATAGCCAAGCTTATGAACTTAACTCCAGAAACAGCGACTTTGTTGAGTCTGGATGAGGGTGGAAACGTGGTGGGTGAGAGAGAGATTGATAGCCGTCTGATTCAGAAGAATGATGTGATTAAGGTGGTTGCAGGTGAGAAAGTGGGGTCAGATGGGTACGTCGTATGGGGAGAGAGCCGTGTGAACGAGAGTATGATAACAGGAGAAGCAAAGCCAGTGGGGAAGAAGAAAGGCGATGCAGTGATTGGAGGAACAGTGAATGAAAATGGAGTTCTTCATGTTAGGGCAACGAGAGTTGGATCAGATAGTGCACTTTCTCAGATTGTTAGGCTCGTTGAATCGGCACAGATGGCTAAAGCCCCTGTTCAGAAATTTGCTGATACAATTTCCAAGTTCTTTGTGCCTATTGTGATTGTGCTTTCACTTTTGACATGGGTAACCTGGTATTTAACTGGAAAGTTCAATCTGTATCCAAAATCATGGATACCAGCTCCAATGGATAGCTTTGAGCTTGCTCTTCAGTTTGGAATATCAGTGATGGTCATAGCCTGCCCCTGTGCATTAGGCCTTGCAACTCCTACAGCCGTCATGGTCGGCACCGGTGTCGGTGCCACTCAAGGAGTGCTCATCAAAGGAGGTCTGGCCTTAGAATCCACCCACAAGGTGAACTGCATAGTGTTCGACAAGACTGGAACTCTAACAGTAGGGAAGCCGATGGTTGTCAGAGAAAAGCTGTTTAAAGATATGAAACTTGATCATCTACTTATCCTCGTTGGTGCAACTGAGGTGAACAGTGAGCACCCTGTAGGCAAAGCCATCGTTGATTATGCAAAGAATTGTAGAGATGGGGAAGAACATAGTCCTTCATGGCCAGAAGCTAAGAACTTTATCACCATTGCTGGCCATGGAGTTAAAGCCACAGTAAAAAACAAGCAAGTCATTGTGGGTAACAGGAGCTTGATGATCGACCACAACATAGCCATTCCAATTGAAGCTCAAAATTTTCTCGATGAAGCAGAAAGTATGGCTCAAACTGGAATCATCGTAGCCATTGATGGGGAGGTCGAAGGAGCTTTCGCCATTTCTGACACTATAAAACCAGGCGCAAAAGAAGTCATTTCTATTCTAAACTCCATGAAAGTGAAAAGCATAATGGTGACTGGAGATAACTGGGGTACTGCGAAGTCCATCGCCATGGAAGTCGGAATCGAAACAGTCATCGCCGAGGCTAAACCTGAGCAGAAAGCTGAGAAAATTAAGGAGTTGCAGGCAGCAGGCCACAAAGTAGCAATGGTGGGAGATGGAATAAACGACTCTCCAGCTCTAGCAGCGGCTGACGTCGGTATAGCGATAGGAGCCGGAACGGACGTAGCCATTGAAGCTGCTGACATCGTTCTGATAAAAAGCAACTTAGAAGATGTAATAACAGCCATCGATCTTTCCAGAAAAACCTTCTCTCGAATTCGTTTGAACTACATTTGGGCTCTAGTTTATAACCTCCTCGGCATTCCAATCGCAGCCGGATGCCTGTTTCCGGCGACCAGATTCAGATTACCGCCGTGGGTTGCCGGAGCTGCCATGGCTGCTTCTTCTGTCAGCGTCGTTTGTAGCTCTCTCGTTTTGAAATTTTACAAGAGACCTAAGAAGCTGGAGATGAACAGTCTTCAGATGAATGGAATCACCATTGAATGA 2943 44.92 MAARFLQLSCTACSRRNDMSPQRPREREENVESSEKKGKAKAVFGISGMTCSPCAGFIERSINRLPGILDASVDFLNDRAQIHYNPGFVNEVSIRGAIEDVGFEARLLYEQDISKTTQKCQIRIEGMTCTACSTAVEQNLQAINGVERAAVALAIEEAEIHYNPDIIKPENLLQSIQDSGFAPTLLAIGDRSSKIELKIEGLRTGASMTIIENSLKSVVGIEDTVADPTLGKISISYRPDMVGPRTFIEVIESIKSGAFKATIFPQERRDSYREKEIKQYFRSFLWSFAFAIPVFLTSMVFMYIPTIERALDTKVWNMMNIGMIVRWELTTPVQFFIGRRFYVGAYKSLRHGSANMDVLVALGTNAAYFYSVYIIIRSVSSPHFEGTDFFETSTMLISFILLGKYLEVLAKGKTSEAIAKLMNLTPETATLLSLDEGGNVVGEREIDSRLIQKNDVIKVVAGEKVGSDGYVVWGESRVNESMITGEAKPVGKKKGDAVIGGTVNENGVLHVRATRVGSDSALSQIVRLVESAQMAKAPVQKFADTISKFFVPIVIVLSLLTWVTWYLTGKFNLYPKSWIPAPMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGLALESTHKVNCIVFDKTGTLTVGKPMVVREKLFKDMKLDHLLILVGATEVNSEHPVGKAIVDYAKNCRDGEEHSPSWPEAKNFITIAGHGVKATVKNKQVIVGNRSLMIDHNIAIPIEAQNFLDEAESMAQTGIIVAIDGEVEGAFAISDTIKPGAKEVISILNSMKVKSIMVTGDNWGTAKSIAMEVGIETVIAEAKPEQKAEKIKELQAAGHKVAMVGDGINDSPALAAADVGIAIGAGTDVAIEAADIVLIKSNLEDVITAIDLSRKTFSRIRLNYIWALVYNLLGIPIAAGCLFPATRFRLPPWVAGAAMAASSVSVVCSSLVLKFYKRPKKLEMNSLQMNGITIE 980
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15588049 15593860 - Bpe023601.1 Bpe08g01488 108364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01488 980 Pfam E1-E2 ATPase 424 621 - -
Bpe08g01488 980 ProSitePatterns E1-E2 ATPases phosphorylation site. 645 651 IPR018303 -
Bpe08g01488 980 Pfam Heavy-metal-associated domain 44 103 IPR006121 GO:0046872
Bpe08g01488 980 Pfam Heavy-metal-associated domain 122 181 IPR006121 GO:0046872
Bpe08g01488 980 SUPERFAMILY HMA, heavy metal-associated domain 40 108 IPR036163 GO:0046872
Bpe08g01488 980 PRINTS Copper-transporting ATPase 1 signature 67 90 - -
Bpe08g01488 980 PRINTS Copper-transporting ATPase 1 signature 142 163 - -
Bpe08g01488 980 PRINTS Copper-transporting ATPase 1 signature 96 116 - -
Bpe08g01488 980 PRINTS Copper-transporting ATPase 1 signature 41 66 - -
Bpe08g01488 980 CDD P-type_ATPase_Cu-like 282 945 - -
Bpe08g01488 980 Pfam haloacid dehalogenase-like hydrolase 639 863 - -
Bpe08g01488 980 ProSiteProfiles Heavy-metal-associated domain profile. 41 107 IPR006121 GO:0046872
Bpe08g01488 980 SUPERFAMILY Calcium ATPase, transduction domain A 443 529 IPR008250 -
Bpe08g01488 980 Gene3D - 650 728 IPR023299 GO:0000166
Bpe08g01488 980 Gene3D - 729 780 IPR023299 GO:0000166
Bpe08g01488 980 PANTHER ATP7, ISOFORM B 20 969 - -
Bpe08g01488 980 SUPERFAMILY HAD-like 642 955 IPR036412 -
Bpe08g01488 980 CDD HMA 121 184 IPR006121 GO:0046872
Bpe08g01488 980 Gene3D - 115 187 - -
Bpe08g01488 980 Gene3D - 191 264 - -
Bpe08g01488 980 PRINTS P-type cation-transporting ATPase superfamily signature 643 657 - -
Bpe08g01488 980 PRINTS P-type cation-transporting ATPase superfamily signature 872 884 - -
Bpe08g01488 980 PRINTS P-type cation-transporting ATPase superfamily signature 796 806 - -
Bpe08g01488 980 PRINTS P-type cation-transporting ATPase superfamily signature 849 868 - -
Bpe08g01488 980 PRINTS P-type cation-transporting ATPase superfamily signature 479 493 - -
Bpe08g01488 980 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 396 929 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe08g01488 980 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 20 969 - -
Bpe08g01488 980 MobiDBLite consensus disorder prediction 19 36 - -
Bpe08g01488 980 Gene3D - 40 110 - -
Bpe08g01488 980 SUPERFAMILY Calcium ATPase, transmembrane domain M 388 917 IPR023298 -
Bpe08g01488 980 ProSiteProfiles Heavy-metal-associated domain profile. 119 185 IPR006121 GO:0046872
Bpe08g01488 980 SUPERFAMILY HMA, heavy metal-associated domain 189 258 IPR036163 GO:0046872
Bpe08g01488 980 ProSitePatterns Heavy-metal-associated domain. 124 153 IPR017969 GO:0046872
Bpe08g01488 980 SFLD p-type atpase 625 901 IPR044492 -
Bpe08g01488 980 SFLD C1.7: P-type atpase like 625 901 - -
Bpe08g01488 980 ProSiteProfiles Heavy-metal-associated domain profile. 194 263 IPR006121 GO:0046872
Bpe08g01488 980 Gene3D - 411 533 - -
Bpe08g01488 980 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 356 958 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bpe08g01488 980 CDD HMA 46 106 IPR006121 GO:0046872
Bpe08g01488 980 Gene3D - 610 906 IPR023214 -
Bpe08g01488 980 SUPERFAMILY HMA, heavy metal-associated domain 116 186 IPR036163 GO:0046872
Bpe08g01488 980 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00308 Bpe-Chr1:1897906 Bpe08g01488 Bpe-Chr8:15588049 3.26E-14 dispersed
Bpe01g00884 Bpe-Chr1:19315408 Bpe08g01488 Bpe-Chr8:15588049 0 dispersed
Bpe02g00510 Bpe-Chr2:3332753 Bpe08g01488 Bpe-Chr8:15588049 8.01E-109 dispersed
Bpe05g00417 Bpe-Chr5:18554382 Bpe08g01488 Bpe-Chr8:15588049 1.57E-110 dispersed
Bpe06g00178 Bpe-Chr6:4526606 Bpe08g01488 Bpe-Chr8:15588049 4.21E-48 dispersed
Bpe08g01488 Bpe-Chr8:15588049 Bpe13g01110 Bpe-Chr13:16704900 2.25E-28 dispersed
Bpe08g01488 Bpe-Chr8:15588049 Bpe08g00778 Bpe-Chr8:9667587 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01488 K17686 - vvi:100259857 1318.91