Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g01498 | ATGGGGTTTCCGGTCGGCTACACGGAGCTTCTTCTCCCTAACCTCTTCCTCCATACTCTCTCCCTTCTGGGTTTTCTCAGGAAGTCCATCTCTAGTCTCTTGCGCTTTATTGGCCTCTGCGAGTTTCTCCAACCAGACTTCTCCTGGTCACAGCCCTACCGAATCGTCCCCACCCGTTTACACGACTCAGATTCCATCTCTCCTGTTCTGATCCGAGAATTTCTCCCCGTCGCCAAGTTCTCTGATCTCGTTCACCCGCCCGAAAGCTGCGCCGTTTGCCTCTACGAGTTCGAGACGGAGGACGAGATCCGGCGCCTTACGAATTGCCGTCACATATTCCACAAAGGCTGCGTGGATCGATGGATGTGTTATGAGCAGAAGACTTGTCCACTCTGTCGAACCCCGTTCATTCCGCCGGGTTTGCTCGGCGGTGGGGATGACCGGCCGTCTGAAACAGCCGAATCGAACGGCGATTCTTCGCAGATACCTGCTGGTTTGTAG | 501 | 54.89 | MGFPVGYTELLLPNLFLHTLSLLGFLRKSISSLLRFIGLCEFLQPDFSWSQPYRIVPTRLHDSDSISPVLIREFLPVAKFSDLVHPPESCAVCLYEFETEDEIRRLTNCRHIFHKGCVDRWMCYEQKTCPLCRTPFIPPGLLGGGDDRPSETAESNGDSSQIPAGL | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 15667748 | 15668248 | + | Bpe023610.1 | Bpe08g01498 | 108374 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g01498 | 166 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 74 | 137 | IPR013083 | - | |
Bpe08g01498 | 166 | MobiDBLite | consensus disorder prediction | 143 | 166 | - | - | |
Bpe08g01498 | 166 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 146 | - | - | |
Bpe08g01498 | 166 | SUPERFAMILY | RING/U-box | 70 | 139 | - | - | |
Bpe08g01498 | 166 | ProSiteProfiles | Zinc finger RING-type profile. | 90 | 133 | IPR001841 | - | |
Bpe08g01498 | 166 | CDD | RING-H2 | 90 | 133 | - | - | |
Bpe08g01498 | 166 | Pfam | Ring finger domain | 89 | 133 | IPR001841 | - | |
Bpe08g01498 | 166 | PANTHER | BRH1 RING FINGER PROTEIN | 1 | 146 | - | - | |
Bpe08g01498 | 166 | SMART | ring_2 | 90 | 132 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g01498 | Bpe-Chr8:15667748 | Bpe09g00485 | Bpe-Chr9:13328216 | 3.13E-14 | dispersed | |
Bpe11g00663 | Bpe-Chr11:5093079 | Bpe08g01498 | Bpe-Chr8:15667748 | 5.84E-96 | wgd | |
Bpe05g00651 | Bpe-Chr5:20298763 | Bpe08g01498 | Bpe-Chr8:15667748 | 4.64E-56 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g01498 | K16281 | - | jre:109014495 | 208.379 |