Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01498 ATGGGGTTTCCGGTCGGCTACACGGAGCTTCTTCTCCCTAACCTCTTCCTCCATACTCTCTCCCTTCTGGGTTTTCTCAGGAAGTCCATCTCTAGTCTCTTGCGCTTTATTGGCCTCTGCGAGTTTCTCCAACCAGACTTCTCCTGGTCACAGCCCTACCGAATCGTCCCCACCCGTTTACACGACTCAGATTCCATCTCTCCTGTTCTGATCCGAGAATTTCTCCCCGTCGCCAAGTTCTCTGATCTCGTTCACCCGCCCGAAAGCTGCGCCGTTTGCCTCTACGAGTTCGAGACGGAGGACGAGATCCGGCGCCTTACGAATTGCCGTCACATATTCCACAAAGGCTGCGTGGATCGATGGATGTGTTATGAGCAGAAGACTTGTCCACTCTGTCGAACCCCGTTCATTCCGCCGGGTTTGCTCGGCGGTGGGGATGACCGGCCGTCTGAAACAGCCGAATCGAACGGCGATTCTTCGCAGATACCTGCTGGTTTGTAG 501 54.89 MGFPVGYTELLLPNLFLHTLSLLGFLRKSISSLLRFIGLCEFLQPDFSWSQPYRIVPTRLHDSDSISPVLIREFLPVAKFSDLVHPPESCAVCLYEFETEDEIRRLTNCRHIFHKGCVDRWMCYEQKTCPLCRTPFIPPGLLGGGDDRPSETAESNGDSSQIPAGL 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15667748 15668248 + Bpe023610.1 Bpe08g01498 108374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01498 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 137 IPR013083 -
Bpe08g01498 166 MobiDBLite consensus disorder prediction 143 166 - -
Bpe08g01498 166 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 146 - -
Bpe08g01498 166 SUPERFAMILY RING/U-box 70 139 - -
Bpe08g01498 166 ProSiteProfiles Zinc finger RING-type profile. 90 133 IPR001841 -
Bpe08g01498 166 CDD RING-H2 90 133 - -
Bpe08g01498 166 Pfam Ring finger domain 89 133 IPR001841 -
Bpe08g01498 166 PANTHER BRH1 RING FINGER PROTEIN 1 146 - -
Bpe08g01498 166 SMART ring_2 90 132 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01498 Bpe-Chr8:15667748 Bpe09g00485 Bpe-Chr9:13328216 3.13E-14 dispersed
Bpe11g00663 Bpe-Chr11:5093079 Bpe08g01498 Bpe-Chr8:15667748 5.84E-96 wgd
Bpe05g00651 Bpe-Chr5:20298763 Bpe08g01498 Bpe-Chr8:15667748 4.64E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01498 K16281 - jre:109014495 208.379