Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01513 ATGGATTTCTCTGTGATTTTCTTTCTGGGTTTAATGTTTTCGCTGAGTAATGCCGACCCAGTTGAAGATAAGCAAGCTTTGCTTGAGTTCATAACCAATCTCCCTCACTCTCGCTACCTCAATTGGAACGACAACTCTCCGGTTTGCAACAACTGGACTGGTGTAACTTGCAGTAAGAATAATGCGCGCGTCATCGCCGTCCGTTTGCCTGGCGTCGGTTTTGACGGTCCTATTCCGGCCAACTCCCTTAGCCGACTCTCGGCTTTGCAAACTTTGAGTCTCAGATCTAATGGTATTACCGGGAAATTCCCTTCAGATTTTTCTAATCTCAGAAACTTGTCCTTTCTTTATCTTCAATTCAATAACTTCTCCGGCCCGTTGCCGTTTGATTTCACTGTCTGGAGGAACCTCACATTCATTAATCTATCAAATAATGGTTTCAATGGAACTATTCCCTCGTCGCTTTCTAATTTGACGCATCTCAATGGTTTGAATCTCGCGAACAACTCATTTTCTGGGGAGATTCCGGACCTCAATTCGGTCGGATTACGAACGCTTGATTTGTCTAACAATCAACTGATGGGTGATGTTCCTCAATCACTCCATAGGTTCCCCAGGTCAGCGTTTGTTGGAAATAACATCTCTTTTCAAAGTTTTGCTCCAGATCTTTCTCCAGTTTCTCCGCTTCCTTCTGAACCATACGAGAAGCCACTGAACAGCAGCAGGAAGCTCGGCGAAAAGGCATTGCTAGCAATTATAGTTGCCGGAGCTCTTCTGGGGCTTTTAGCATTTGGATTTCTGATACTTGTTTACTGCTCCAGAAGGAAAAAGAGAGATGAGTTCGCAGGGAATTTGCAGAAAGGAGAAATGTCGCCGGAAAAAGTGATAGCGAGGAGCCAAGATGCGAATAACAGGTTGGTGTTTTTCGAGGGGTGTAACTATGCATTTGACTTGGAAGATTTACTAAGAGCTTCTGCAGAGATTCTGGGAAAGGGGACATTTGGTACTGCTTACAGAGCCATTCTTGAGGATGCAACCAGAGTTGTGGTGAAGAGATTGAAGGAAGTAAGTGTGGGGAAGCGAGAGTTTGAACAGCAGATGGAGATTGTCGGAAGCATAAGGGATGAGAATGTGGTTGAGTTGAAGGCTTATTATTACTCCAAGGATGAGAAGCTCATGGTCTATGAATATTACACTCAAGGCAGTGTCTCTGCAATGCTGCATGGTAAAAGAGGGGAGGATATAGTCCCTTTGGACTGGAATTCTCGGCTGCGGATAGCCGTCGGTGCTGCAAGAGGTATATCTCGGATTCACAAAGAGAATGGAGGGAAGCTCGTACATGGCAACGTGAAGTCTTCGAATATCTTTCTCAATACTAGACAATACGGATGTGTTTCTGATCTCGGATTGGCGACTTTAACGGCCTCATTGTCCTCTCCAATATCCCGTGCTGCTGGCTACCGGGCCCCTGAGGTGACAGATACTAGAAAAGCAACTCAATGCTCCGATGTTTTCAGCTTTGGTGTGGTGCTTCTAGAATTACTTACAGGGAAATCTCCTATTCATACTACTGGAGGGGATGAGATTGTTCACTTAGTGAGATGGGTTCATTCGGTTGTGAGAGAGGAGTGGACGGCGGAAGTGTTTGACGTGGAGCTCATGAAGTTTCCCAACATAGAGGAGGAGATGGTTGAGATGTTGCAGATAGCACTGTCGTGTGTTGCGAGGATGCCGGATCAGAGACCAAAAATGGCGGATGTAGTGAAGATGATAGAAAATGTCCGACAGTTTGATAATGAAAATCCATCCCCTTCCATGCCAGTAAGCAGGACGGAACCTTCAACGTCTTAG 1851 45.49 MDFSVIFFLGLMFSLSNADPVEDKQALLEFITNLPHSRYLNWNDNSPVCNNWTGVTCSKNNARVIAVRLPGVGFDGPIPANSLSRLSALQTLSLRSNGITGKFPSDFSNLRNLSFLYLQFNNFSGPLPFDFTVWRNLTFINLSNNGFNGTIPSSLSNLTHLNGLNLANNSFSGEIPDLNSVGLRTLDLSNNQLMGDVPQSLHRFPRSAFVGNNISFQSFAPDLSPVSPLPSEPYEKPLNSSRKLGEKALLAIIVAGALLGLLAFGFLILVYCSRRKKRDEFAGNLQKGEMSPEKVIARSQDANNRLVFFEGCNYAFDLEDLLRASAEILGKGTFGTAYRAILEDATRVVVKRLKEVSVGKREFEQQMEIVGSIRDENVVELKAYYYSKDEKLMVYEYYTQGSVSAMLHGKRGEDIVPLDWNSRLRIAVGAARGISRIHKENGGKLVHGNVKSSNIFLNTRQYGCVSDLGLATLTASLSSPISRAAGYRAPEVTDTRKATQCSDVFSFGVVLLELLTGKSPIHTTGGDEIVHLVRWVHSVVREEWTAEVFDVELMKFPNIEEEMVEMLQIALSCVARMPDQRPKMADVVKMIENVRQFDNENPSPSMPVSRTEPSTS 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15802651 15804669 + Bpe023624.2 Bpe08g01513 108389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01513 616 SUPERFAMILY Protein kinase-like (PK-like) 327 611 IPR011009 -
Bpe08g01513 616 PANTHER PROTEIN, PUTATIVE-RELATED 17 602 - -
Bpe08g01513 616 Pfam Leucine rich repeat 79 123 IPR001611 GO:0005515
Bpe08g01513 616 SUPERFAMILY L domain-like 33 204 - -
Bpe08g01513 616 Gene3D Transferase(Phosphotransferase) domain 1 399 606 - -
Bpe08g01513 616 Pfam Leucine Rich Repeat 183 203 IPR001611 GO:0005515
Bpe08g01513 616 Pfam Leucine Rich Repeat 136 158 IPR001611 GO:0005515
Bpe08g01513 616 ProSitePatterns Protein kinases ATP-binding region signature. 329 360 IPR017441 GO:0005524
Bpe08g01513 616 Gene3D Ribonuclease Inhibitor 22 131 IPR032675 -
Bpe08g01513 616 Gene3D Ribonuclease Inhibitor 132 232 IPR032675 -
Bpe08g01513 616 ProSiteProfiles Protein kinase domain profile. 323 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g01513 616 MobiDBLite consensus disorder prediction 596 616 - -
Bpe08g01513 616 PANTHER OS05G0588300 PROTEIN 17 602 - -
Bpe08g01513 616 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Bpe08g01513 616 Gene3D Phosphorylase Kinase; domain 1 290 397 - -
Bpe08g01513 616 Pfam Protein tyrosine and serine/threonine kinase 327 590 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01513 Bpe-Chr8:15802651 Bpe12g00365 Bpe-Chr12:8935676 0 dispersed
Bpe08g01513 Bpe-Chr8:15802651 Bpe03g00985 Bpe-Chr3:29399732 3.51E-15 transposed
Bpe08g01513 Bpe-Chr8:15802651 Bpe09g00065 Bpe-Chr9:451682 1.61E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63489 PF07714 PK_Tyr_Ser-Thr 5.20E-33 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01513 - - zju:107430123 932.939