Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g01521 TTCATGGACGATGGTTTGGGGAAGATAAAGGTTATCCCAGATCACTTTCAAATTTCAGAACTTGTTTCCAACTCTCTTCAGAACACAACCTCTTCGTCAGACCCACGCCTTAATAATCCCTCCAGAATAGGCCATAGCCAATCCTGGACCCGGAGAAAACTAAAAAGTGCTGCATTCATGCTTAATCTGTTCAGTCTAAGGGGACTGCCATGGGGTTCTGGCAGTGATAGCCAGGAGAAGGTCGTGTTGACTGCTGCAGAAGTAGAATCTCTTCGCTCGGAAGTTGCTGACTTGGAGGAAAGGGAAGCTCACTTAAAAGCTCAGTTAGAGCATATAGATGAAATTCTGCGGTCTGCTCGTCTGTCTGGCTATTTACATATACGAACGAGGTGGACAGCTCTACCAGGAGAGCCTCCGCCGATAGATGATACTGACGTTGATGACTGGCTTCCACGCTTTGTCGTTCTTCACGGAGCTTGTATTTTCTTCTACTTGATGTCAACGGATCTAAGTCCTCAGGATTCCACCCTGTTATCTGACATTGTTGAAGTAGGCCCTCTTCCTAATGTTAGTCGGGAAGATGGAGAAACGCAATATGCTTTTTATATCTTAACTCAGCATGGATTGAGATACGAGTGCTCAAGCGTCTCCATGATGCAGGTGAAGTCGTGGTTATTGGCCTTGCAAAATGATTGCAAAATGGGGTCCGATGGGAAGAAAAGCATGGGGGTGGTGCTTTCGGAGCAGTAA 750 46.27 FMDDGLGKIKVIPDHFQISELVSNSLQNTTSSSDPRLNNPSRIGHSQSWTRRKLKSAAFMLNLFSLRGLPWGSGSDSQEKVVLTAAEVESLRSEVADLEEREAHLKAQLEHIDEILRSARLSGYLHIRTRWTALPGEPPPIDDTDVDDWLPRFVVLHGACIFFYLMSTDLSPQDSTLLSDIVEVGPLPNVSREDGETQYAFYILTQHGLRYECSSVSMMQVKSWLLALQNDCKMGSDGKKSMGVVLSEQ 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15865054 15866491 + Bpe023633.1 Bpe08g01521 108397

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g01521 249 Gene3D - 103 232 IPR011993 -
Bpe08g01521 249 SMART PH_update 119 235 IPR001849 -
Bpe08g01521 249 Coils Coil 81 115 - -
Bpe08g01521 249 ProSiteProfiles PH domain profile. 118 233 IPR001849 -
Bpe08g01521 249 MobiDBLite consensus disorder prediction 27 49 - -
Bpe08g01521 249 PANTHER OS05G0595500 PROTEIN 1 240 - -
Bpe08g01521 249 PANTHER OS05G0595500 PROTEIN 1 240 - -
Bpe08g01521 249 SUPERFAMILY PH domain-like 114 230 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g01521 - - K00940 csv:101205585 355.91
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g138 . . . . . . Bma07g01686 . . . . . . . . . Cpe05g00604 . . . . . . . . . . . . . . Cone8ag0242 Cone12ag0246 . Cone9ag0855 . . . . . Blo19g00369 Bda07g01930 Bda09g00013 Bpe08g01521 . . . . Cmo02g01141 Cmo15g01093 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 0 1 1 1 1 1 1 1 1 5 1 1 36