Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00005 ATGAAATTTCTACGATTTTTACAGCACTTCGTTATTCTTGTTCTATCTTTTCTTCAAATTTTATGTCACTGTTCATCTTACCCTACTCCCATGAATTGCACGGACACAAGTCGGCTATGCACCTCATTTTTAGCCTTCAAACCCCAACCAAACCAGACCTTCGCCGTACTTCAGAGCATGTTCGACGTATTGCCGGCGGACATTACCGTCGAAGGCAATGGCCACAACTACGTCTTCATCAAGAAAAACTGTTCGTGTTCGTCAACATCGAAGAAATACATCACAAACACCACCTTTACCGTCAAATCAAACGGGGGTTATGTGTACGATTTGGTAATTGACGCTTATCAGGGCCTCGCTTCCTTGCCCAACACAACGAGGGCGGCGAGGAGCGGAGCTGTAGTTTCTCTGAGGCTGTTTTGTGGGTGTTCGAATGGGCTGTGGAATTACCTGATGAGCTATTTGTTGACAGAAGGAGATAGTATTCAATCTTTAGCTAGCAGATTTGGGGTCAGTATGGATAGCATTGAGGCAGTCAATGGAATTCTAAATCCCGATAATGTCTCTCTCGCTTCTCTGTATTACATTCCTTTGAATTCCGTTCCTGGGGAGCCTTATCCTTTGGACACTGATAGTCCACCCGCTCCTCCTCCTGCATCTGCTCCATCTTCTGAGAATATTTCAGATAAAGGGAATGACAAAGGTCATGCACCATATGTATGGATTGTCGGGACTTTGGGGGTTATTCTCGTTTTACTTTTATTAAGCATAGCTGTTTATGCATTCTTGAGGAAGTCAAGCTGCATTTCAAGTACTCGTAGGCATGCAAAAGATCCTATTCCTAACAGCAAGACTTCGCACAAGTTCCACATTCTTCAGAAGCCGAGTTTTTTTTGTGCTTCAGGCAGGTATATTTGCTGCAGATCTGCAGATTGGAAGCAAACCAATGCGGAATCAAGCAATCTCCAGACCACAATTCCTAAAGCTCTTGAAAACAGTGTATTGGATGTGGAAAAGCCTATGGTTTTTACATATGATGAGATTTCTTCTTCCACTGATGGGTTTTCTGATTCAAGTCTTCTTGGTCATGGAACATATGGTTCGGTGTATTATGGCCTCCTTCGTGACCAGGAAGTTGCTGTAAAAAGAATGACTGCGACAAAGACAAAGGAGTTCATGTCGGAGCTGAAAGTCCTTTGCAAAGTTCATCATGCAAATTTGGTAGAGTTGATTGGATATGCGGCACACGAGGATGAGCTCTTTCTCATTTATGAATATGCTCAAAAGGGTCCACTTAGAAGTCATTTACATGATCCACATAACAAGGGTCATACATCGCTTTCTTGGGTCACGAGGGCCCAGATTGCTTTAGATGCTGCTAGAGGTCTTGAATACATTCACGAGCACACAAAAAATCATTATGTCCATCGAGATATCAAGACGAGTAATATTTTACTTGATGGTTCCTTTAGGGCGAAGATTTCTGATTTTGGGTTGGCAAAACTTGCTGCAAAAACAGGGGAGGGAGAAACTACAGTCACTAAAGTTGTTGGTACCTTTGGTTATCTGGCTCCCGAGTACCTGAGTGATGGTCTTGCAACGACCAAAAGTGATGTGTATGCTTTTGGCGTTGTTCTTTTTGAAATTATATCAGGAAAGGAGGCCATTATTCGAACGGAAGGGACTGGTGCTAAAAATCCTGAAAGGCGCTCACTTGCATCCATTATGTTAGCTGCTCTTAGAACGTCACCTGATTCCACAAGCATGGCCAGCCTGAAAGACCTTGTGGATCCTAATATGATGGATTTGTATCCCCATGATTGTCTTTTCAAGATGGGGAAACTGGGGAAGCAATGTGTGGAGGAGGATCCAATATTGAGACCAGACATGAAACAAGTAGTAATTACACTGTCTCAGATCTTACTTTCTTCTATCGAGTGGGAAGCAACTCTGGCTGGGAATAGCCAAGTTTTCAGTGGCCTTGTTCAGGGAAGGTAG 1998 43.24 MKFLRFLQHFVILVLSFLQILCHCSSYPTPMNCTDTSRLCTSFLAFKPQPNQTFAVLQSMFDVLPADITVEGNGHNYVFIKKNCSCSSTSKKYITNTTFTVKSNGGYVYDLVIDAYQGLASLPNTTRAARSGAVVSLRLFCGCSNGLWNYLMSYLLTEGDSIQSLASRFGVSMDSIEAVNGILNPDNVSLASLYYIPLNSVPGEPYPLDTDSPPAPPPASAPSSENISDKGNDKGHAPYVWIVGTLGVILVLLLLSIAVYAFLRKSSCISSTRRHAKDPIPNSKTSHKFHILQKPSFFCASGRYICCRSADWKQTNAESSNLQTTIPKALENSVLDVEKPMVFTYDEISSSTDGFSDSSLLGHGTYGSVYYGLLRDQEVAVKRMTATKTKEFMSELKVLCKVHHANLVELIGYAAHEDELFLIYEYAQKGPLRSHLHDPHNKGHTSLSWVTRAQIALDAARGLEYIHEHTKNHYVHRDIKTSNILLDGSFRAKISDFGLAKLAAKTGEGETTVTKVVGTFGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGKEAIIRTEGTGAKNPERRSLASIMLAALRTSPDSTSMASLKDLVDPNMMDLYPHDCLFKMGKLGKQCVEEDPILRPDMKQVVITLSQILLSSIEWEATLAGNSQVFSGLVQGR 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 54296 57962 - Bpe023685.1 Bpe09g00005 108405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00005 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Bpe09g00005 665 Pfam Protein tyrosine and serine/threonine kinase 360 635 IPR001245 GO:0004672|GO:0006468
Bpe09g00005 665 SMART LysM_2 153 197 IPR018392 -
Bpe09g00005 665 SUPERFAMILY Protein kinase-like (PK-like) 337 637 IPR011009 -
Bpe09g00005 665 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Bpe09g00005 665 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 31 665 IPR044812 GO:0019199|GO:0045087
Bpe09g00005 665 SMART serkin_6 355 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00005 665 MobiDBLite consensus disorder prediction 207 221 - -
Bpe09g00005 665 Gene3D LysM domain 150 202 IPR036779 -
Bpe09g00005 665 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
Bpe09g00005 665 Gene3D Phosphorylase Kinase; domain 1 327 426 - -
Bpe09g00005 665 CDD LysM 153 187 IPR018392 -
Bpe09g00005 665 Gene3D Transferase(Phosphotransferase) domain 1 428 651 - -
Bpe09g00005 665 ProSiteProfiles Protein kinase domain profile. 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00005 665 MobiDBLite consensus disorder prediction 206 231 - -
Bpe09g00005 665 PANTHER BNAA06G02020D PROTEIN 31 665 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00201 Bpe-Chr1:1231070 Bpe09g00005 Bpe-Chr9:54296 1.07E-42 dispersed
Bpe08g00163 Bpe-Chr8:906406 Bpe09g00005 Bpe-Chr9:54296 3.58E-38 dispersed
Bpe09g00005 Bpe-Chr9:54296 Bpe10g00811 Bpe-Chr10:14196531 6.36E-114 dispersed
Bpe15g01054 Bpe-Chr15:19840717 Bpe09g00005 Bpe-Chr9:54296 1.44E-51 dispersed
Bpe09g00005 Bpe-Chr9:54296 Bpe07g00626 Bpe-Chr7:12960216 1.52E-89 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63490 PF07714 PK_Tyr_Ser-Thr 7.60E-49 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00005 - - csv:101213624 962.985