Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00034 ATGAGTAACTGGTTGGGTTTTTCGCTTACTCCACATCTGAGAATCCATGAGAGCTTCAATGGCGGACACGAGGAGGAAGTGCAGAATCAAGATGCAAATTTTCCCCAGTTTTCTGTCTTGCCATTGCGCTCTGATGGAACCTTTTGCGTTTCTGCTGATCCTTTCGGACGCGTTAATGATTGGACATACGTGAGCTCAGCAAATGGCGGTGCCAATCCAAACGAAGAAAGTCCAAAACTTGAAGATTTCCTGGGAAGTTGCTACCCAAATTCTCCTCCGGCTGAAGAAACCAGATTTCTCTCGGAAAACAACGTGAACGTAGCTCCAAATTTCAACACCCATAACGAGATGGAATTGGAAACAGGAGAGAATATGACAAACCCATCTCACTACCTGATCCAACCTGATTATCCGCAAGCCTTAATCCCAAGTAACAATGCTTCTTGCAAGTCTTGGTTGGGCCGAACCCCAGTATTTCCCGATCCGGCAAAATATTCCGGCGGGGGGAACGAGGCTAGTTTTCAGTCGCTGTCTCTAAGCATGAGCACAAGCTCACAGAATGTGGCGGATAATCGCAAACGTCCACTGTCTAGAGAACCAGTTCCAAGAAAATCAATCGATACTTTTGGACAGAGAACTTCGCAGTATCGCATAGATGGACCGGAAGATACGAAGCTCATCTCTGGGATAACAGCTGCAGAAAAGAAGGCCAAACCAGGAAAGGAAGGCAGGGTGAGATACTGTAATTCTTTCCGAGTTTCGTTTTGTTCCCTTTGTACTTACGAAAAAGAGCTGGAAGAGATGAAGAACATGAGCAGACAAGAGTTCGTCGCCAATTTGAGAAGGAAAAGTAGTGGGTTTTCGAGGGGAGCTTCGATGTACAGAGGGGTGACAAGCAGACACCATCAGCATGGACGATGGCAAGCCCGAATCGGAAGAGTTGCAGGAAACAAGGACTTGTACCTTGGCACATTCAGCACTCAAGAGGAAGCAGCGGAGGCCTACGACATTGCAGCGATAAAGTTCAGAGGAACGAGTGCGGTGACGAATTTCGACATTAGTCGATACGACGTCAAGAGAATTTGCTCGAGCACGACATTAATTGCGAGTGATCTTGCTAAACGTTCCCATAAAGAGTGCTGTCCTCAACCTGCTCTCGAGGACTATAATTCATGTGCATCATCGACAACCTCTTCGCAGCAGCTCTTGGCCATTAATGGCGAAGCTTCGGACGAGTACGCAGAAATGGTGTGGAGTGGTAACGGGGAAGATCACTGTCATCAAAGTGGGAGTAGTACATCCATGGTGGCTTCGAGTAGTAGAAATCCCTCCAATCCATCAAATGGCGAATTTGACGGCAATAGAGATGAGTACCCTCGTGCTTATTTTTCAGGAGAGGCCCAGAGGTCCGATCGAAGCCGGGCCGGAAGCGGAGGACTGGTTCATCAAGCTCCCATTTTTGCGCTGTGGAACGAATAG 1479 47.8 MSNWLGFSLTPHLRIHESFNGGHEEEVQNQDANFPQFSVLPLRSDGTFCVSADPFGRVNDWTYVSSANGGANPNEESPKLEDFLGSCYPNSPPAEETRFLSENNVNVAPNFNTHNEMELETGENMTNPSHYLIQPDYPQALIPSNNASCKSWLGRTPVFPDPAKYSGGGNEASFQSLSLSMSTSSQNVADNRKRPLSREPVPRKSIDTFGQRTSQYRIDGPEDTKLISGITAAEKKAKPGKEGRVRYCNSFRVSFCSLCTYEKELEEMKNMSRQEFVANLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSTTLIASDLAKRSHKECCPQPALEDYNSCASSTTSSQQLLAINGEASDEYAEMVWSGNGEDHCHQSGSSTSMVASSSRNPSNPSNGEFDGNRDEYPRAYFSGEAQRSDRSRAGSGGLVHQAPIFALWNE 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 257062 259641 + Bpe023713.1 Bpe09g00034 108434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00034 492 MobiDBLite consensus disorder prediction 183 204 - -
Bpe09g00034 492 Pfam AP2 domain 294 344 IPR001471 GO:0003700|GO:0006355
Bpe09g00034 492 MobiDBLite consensus disorder prediction 420 478 - -
Bpe09g00034 492 SMART rav1_2 293 358 IPR001471 GO:0003700|GO:0006355
Bpe09g00034 492 MobiDBLite consensus disorder prediction 424 451 - -
Bpe09g00034 492 PANTHER PUTATIVE, EXPRESSED-RELATED 22 218 - -
Bpe09g00034 492 PANTHER PUTATIVE, EXPRESSED-RELATED 257 441 - -
Bpe09g00034 492 SUPERFAMILY DNA-binding domain 292 354 IPR016177 GO:0003677
Bpe09g00034 492 Gene3D AP2/ERF domain 293 354 IPR036955 GO:0003700|GO:0006355
Bpe09g00034 492 CDD AP2 292 354 IPR001471 GO:0003700|GO:0006355
Bpe09g00034 492 ProSiteProfiles AP2/ERF domain profile. 293 352 IPR001471 GO:0003700|GO:0006355
Bpe09g00034 492 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 218 - -
Bpe09g00034 492 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 257 441 - -
Bpe09g00034 492 PRINTS Ethylene responsive element binding protein signature 294 305 IPR001471 GO:0003700|GO:0006355
Bpe09g00034 492 PRINTS Ethylene responsive element binding protein signature 334 354 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00674 Bpe09g00034 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00034 Bpe-Chr9:257062 Bpe04g00142 Bpe-Chr4:956633 1.30E-68 dispersed
Bpe03g00674 Bpe-Chr3:26924292 Bpe09g00034 Bpe-Chr9:257062 3.13E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21844 PF00847 AP2 2.30E-08 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00034 K09285 - qsu:112020712 452.21