Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00049 ATGGCCGGAGTGCCAGATTCCGGCAGTCGACCTTCTGTATCGGAGCTAAACAAGAAGAAGCTCTTATTCTGGGCTCTCTCTGCTGTTCTTCTGATTTCTGATTTCACCGGAGTTGCAGTCGGAGTTGAGTCGAGAGAAAACTCCGACGACGTCGACACTTTTCTTCCTTCCCATTCTATTATCAACACCTCTTGCAGCTCCACTTTATACCCCGACTTATGCGTCTCCGCCATTACCTCTGTTGACGGAGCTAGCAAAAAAGTCTCCAGCCCGAAGGACGTTATCGAGCTGTCGTTAAATATCACGATCGAAGAAGTGAAGAAAAATTATTTAGCCATTAAAAAGCTTAGGAGCAGAGCAGGATTGACCAAGCGCGAGAAGGTTGCGGTCAATGATTGCTTGGATAACATGGAAGACACCCTGTACGAGCTCGACAAGGCTGTAGAGGATCTCCATTTGTACCCAACTAAGAAATCTCTAGCCCAGCACGCCGACGACCTTAAGACTTTGCTCAGCTCCACAATCACCAACCAGGAATCTTGCTTAGACGGGTTCTCTCACGACGATGCCGACAGAAAGGTAAGGAAGGTGCTGCTCAAGGCGGAGATCCATATCGAGAAAATGTGCAGTAATGCTTTGGCGATGATTAAGAACATGACTGACACTGATATAATCAACGAGAGTAGAATGATGGGAAGGAAAAAGCTGACGGAGGAGCCGACGGAGGAGGTGGGTCACGACGACATAAAGTGGCCGGATTGGCTGTCGGGTTCCGACAGACGGCTGTTGCAGTCGACTTCAGTGACACCGAATGTGGTGGTGGCAGCCGACGGCAGTGGGGACTACCGGACAGTCTCGGAAGCAGTGGCAGCCGCACCGTCAAGGACGGCGGTCGGCGATAATTTTCTGGCCCGGGACATTACCTTCCAAAACACCGCCGGTCCGTCCAAGCACCAGGCCGTGGCTCTACGTGTCGGGTCCGATCTCTCCGCCTTTTACCGATGCGAAATGCTTGCCTATCAAGATACCCTCTACGTCCACTCCAACCGTCAATTCTTTATAGAGTGCGTCGTCGTCGGCACCGTTGATTTCATCTTCGGCAACGCCGCCGCCGTCCTTCAAAAGTGCAATATCCGTGCACGTCGGCCTAACTCCGGCCAGAAAAACATGGTCACCGCCCAAGGCCGAACCGACCCGAACCAAAACACCGGAATTGTCATCCAACTTTGTAATATTGACGCCACCTCCGATCTCGCACCAGTTCAAAGCAGTTTCCCAACTTATCTCGGGCGACCATGGAAGGAATACTCGAGGACGGTGGTTATGCAAACGGCGATAAGCAATGTGATAAACCCAGCCGGATGGCACATCTGGGAAGGGGATTTCGCTCTCGCCACATTGTTCTACGGCGAGTATAAGAATACCGGAGCCGGAGCGGACACATCGAAGAGGGTGACGTGGTCCACAGGCTACGGCAAGGTGGACGAGGTTGAAGCGAGAGAATTCCGCCGGAAAACTCGCCGGCGACTTGTCATTCTTGTTGTTTCTGTCGTCGTCCTGATTGCTTTAATCGTCGGGGTAGTCGCCGGCACCGTGATTCACAAGCGGAGCGGTTCTTCGCCGTCAATGCAGTTAACTCCGACTGCTTCGATTAAAAATATTTGCAGCGTGACGCAGTATCCCGCGTCTTGTATATCTACACTCGAGGCCTCGAATACCACCAACCCGGCAGTTCTCTTCAAGTTTTCTCTCCGAGTTGCCATTAACGAGCTCTCCAAGCTCTCTCAGTACCCCACAAAGCTCAGCACCAACGATACCAAGCTTAACGAGACCTTGTGGCTCTGTGGCGCGCTTTTCGAAGACGCCGTCGACAGAGTCAACGACTCGATTTCAGCCATGGAAGTGGGCGAAGGAGATAGGCTTTTGTCCGAGTCCAAAATCAACGACTTGAGAACATGGCTCAGCGCCACCATTACCGACCAGGAAACCTGCTTGGACGCTCTTCAAGATCTGAACTCCACTCTTGTAAACGACTTCAGAAATGCGATGGAAAACTCCACCGAGTTCGTCAGCAATAGTTTGGCCATTGCAACGAAAATTCTCGGTCTGTTGAGCGATTTCAACATTCCGATACACCGGAGGTTGCTCGGATTCAAAGGGTTGGACTCAAACTTTCCAGATTGGGTAAGCGCCGGAGATCGGAGGCTGCTGCAAACGGAGAATGTGGTGGCGAACGTGACGGTGGCGGCTGACGGGAGCGGGAACTACACGACGATCTCCGATGCGGTGAATTCCGTGCCAAAGAAGAGTACGGTGAGATTTATTATATACGTGAAGGAAGGAAGATACGAAGAGACGGTGAGATTGGATAAGAATACATGGAACGTTATGATGATCGGAGACGGCAAAACTAAGACCATTGTTTCCGGCAGCTTGAACTTTGTCGATGGCACTCCCACTTTCTCCACCGCTACATTCGCTGTTGCCGGGAAAGGATTCATTGCCAAGGACATCGGCTTTGTCAACACGGCCGGAGCAGCCAAGCATCAGGCAGTTGCATTCCGGTCAGATTCAGATCTTTCGGTCTACTTCGGCTGCTCATTCGATGCCTTCCAAGACACCCTCTATGCCCACTCCAATCGGCAATTCTACCGCAATTGTGACATTACGGGCACCATCGACTTCATTTTCGGTAATGCGGGTGTTGTCTTTCAGGGGTGCAATATCATGCCTAGGCAGCCACTGGCCAACCAGTTCAACACCATCACAGCTCAAGGCAAAAAAGACCCTAACCAGAACACGGGCATTTCCATGCAAAAATGCACTTTTTCCCCTCTGCCTGGCGACAATCTCTCTGCTCCAACTTACCTTGGTCGACCATGGAAAGACTATTCCACTACTGTCATCATGCAGTCCGATATTGGCGTGTTCCTCAACCCCTTGGGTTGGATCGAATGGATCATTGGCGTCGAGCCTCCCAAAACTATATTTTATGCCGAGTACCAGAACACGGGACCTGGCTCTGCCATGGACAAAAGGATCAGTTGGGCTGGTTATAGGCCGACTATAACTGCAGAAGAAGCCAGAAAATTCACAGTCAACTCTTTCATTCAGGGCAACGATTGGTTGCCGGCAACAAGAGTTGAATTTGATGCATCTTTGTGA 3165 51.18 MAGVPDSGSRPSVSELNKKKLLFWALSAVLLISDFTGVAVGVESRENSDDVDTFLPSHSIINTSCSSTLYPDLCVSAITSVDGASKKVSSPKDVIELSLNITIEEVKKNYLAIKKLRSRAGLTKREKVAVNDCLDNMEDTLYELDKAVEDLHLYPTKKSLAQHADDLKTLLSSTITNQESCLDGFSHDDADRKVRKVLLKAEIHIEKMCSNALAMIKNMTDTDIINESRMMGRKKLTEEPTEEVGHDDIKWPDWLSGSDRRLLQSTSVTPNVVVAADGSGDYRTVSEAVAAAPSRTAVGDNFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCEMLAYQDTLYVHSNRQFFIECVVVGTVDFIFGNAAAVLQKCNIRARRPNSGQKNMVTAQGRTDPNQNTGIVIQLCNIDATSDLAPVQSSFPTYLGRPWKEYSRTVVMQTAISNVINPAGWHIWEGDFALATLFYGEYKNTGAGADTSKRVTWSTGYGKVDEVEAREFRRKTRRRLVILVVSVVVLIALIVGVVAGTVIHKRSGSSPSMQLTPTASIKNICSVTQYPASCISTLEASNTTNPAVLFKFSLRVAINELSKLSQYPTKLSTNDTKLNETLWLCGALFEDAVDRVNDSISAMEVGEGDRLLSESKINDLRTWLSATITDQETCLDALQDLNSTLVNDFRNAMENSTEFVSNSLAIATKILGLLSDFNIPIHRRLLGFKGLDSNFPDWVSAGDRRLLQTENVVANVTVAADGSGNYTTISDAVNSVPKKSTVRFIIYVKEGRYEETVRLDKNTWNVMMIGDGKTKTIVSGSLNFVDGTPTFSTATFAVAGKGFIAKDIGFVNTAGAAKHQAVAFRSDSDLSVYFGCSFDAFQDTLYAHSNRQFYRNCDITGTIDFIFGNAGVVFQGCNIMPRQPLANQFNTITAQGKKDPNQNTGISMQKCTFSPLPGDNLSAPTYLGRPWKDYSTTVIMQSDIGVFLNPLGWIEWIIGVEPPKTIFYAEYQNTGPGSAMDKRISWAGYRPTITAEEARKFTVNSFIQGNDWLPATRVEFDASL 1054
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 328544 334416 - Bpe023728.2 Bpe09g00049 108449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00049 1054 Gene3D Invertase/pectin methylesterase inhibitor family protein 57 220 IPR035513 -
Bpe09g00049 1054 Gene3D Invertase/pectin methylesterase inhibitor family protein 547 700 IPR035513 -
Bpe09g00049 1054 Gene3D - 739 1054 IPR012334 -
Bpe09g00049 1054 Gene3D - 298 508 IPR012334 -
Bpe09g00049 1054 SMART PMEI_2 56 215 IPR006501 GO:0004857
Bpe09g00049 1054 SMART PMEI_2 546 696 IPR006501 GO:0004857
Bpe09g00049 1054 PANTHER PECTINESTERASE 1-RELATED 297 503 - -
Bpe09g00049 1054 PANTHER PECTINESTERASE 1-RELATED 13 295 - -
Bpe09g00049 1054 PANTHER PECTINESTERASE 1-RELATED 493 1051 - -
Bpe09g00049 1054 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Bpe09g00049 1054 SUPERFAMILY Pectin lyase-like 268 489 IPR011050 -
Bpe09g00049 1054 TIGRFAM PME_inhib: pectinesterase inhibitor domain 539 700 IPR006501 GO:0004857
Bpe09g00049 1054 TIGRFAM PME_inhib: pectinesterase inhibitor domain 57 219 IPR006501 GO:0004857
Bpe09g00049 1054 Gene3D - 233 297 IPR012334 -
Bpe09g00049 1054 Pfam Pectinesterase 297 503 IPR000070 GO:0030599|GO:0042545
Bpe09g00049 1054 Pfam Pectinesterase 745 1040 IPR000070 GO:0030599|GO:0042545
Bpe09g00049 1054 Pfam Plant invertase/pectin methylesterase inhibitor 550 696 IPR006501 GO:0004857
Bpe09g00049 1054 Pfam Plant invertase/pectin methylesterase inhibitor 60 215 IPR006501 GO:0004857
Bpe09g00049 1054 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 220 IPR035513 -
Bpe09g00049 1054 PANTHER PECTINESTERASE 297 503 - -
Bpe09g00049 1054 PANTHER PECTINESTERASE 13 295 - -
Bpe09g00049 1054 PANTHER PECTINESTERASE 493 1051 - -
Bpe09g00049 1054 SUPERFAMILY Pectin lyase-like 744 1051 IPR011050 -
Bpe09g00049 1054 CDD PMEI-like_3 554 700 - -
Bpe09g00049 1054 CDD PMEI-like_3 63 220 - -
Bpe09g00049 1054 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 550 701 IPR035513 -
Bpe09g00049 1054 ProSitePatterns Pectinesterase signature 2. 889 898 IPR033131 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00695 Bpe09g00049 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01000 Bpe-Chr2:9977321 Bpe09g00049 Bpe-Chr9:328544 1.41E-84 dispersed
Bpe09g00049 Bpe-Chr9:328544 Bpe13g01126 Bpe-Chr13:16828866 7.07E-98 dispersed
Bpe06g00535 Bpe-Chr6:16428946 Bpe09g00049 Bpe-Chr9:328544 1.58E-10 transposed
Bpe03g00695 Bpe-Chr3:27078457 Bpe09g00049 Bpe-Chr9:328544 3.86E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00049 - - pvu:PHAVU_010G123100g 969.148