Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00053 ATGGTGAAGCGCTGGAGCTGGAGCTGGAGCCCGCTGTTTTTGCTCATTAACGTCTGCATTCTGGAATGGAGGCCTAGTCTCGTGTATGGAGCCACAGATCCAGGAGATGCTGCTGCTCTAAGGGTCTTGTACACCTCTTTGAATTCTCCATCTCAGTTAACCCAGTGGAGTGCAAATGGTGATGATCCGTGCGGGCAGTCATGGAAGGGTGTTTCTTGCTCAGGCTCGCGGGTCACCGAAATTGTACTGTCTGGCCTGGGACTTTCTGGATCATTGGGATACCAGCTCACAAGTTTAACATCCACCACCAAATTAGATGTGAGCAATAACAATCTTGCTGGAGAGATAGCTTATCAGCTACCACCAAACTTACTTAGATTGGATCTTGGTCGTAATAATTTTAATGGCGGCATTCCTTACTCCATCTCTCAAATGACTACTCTACAGTACCTAAATATCAGCCATAACCAGCTTCAGAATCAACTGATTGATATGTTTGACAGCCTTTCATCTCTTGTCGCCCTGGATATTTCATATAATTCTTTGCCAGGTGCCCTCCCCAGGAGTTTTAGCTCCCTCTCCAGTATGAACACTATGTACTTGCAAAACAACCAATTCACTGGCACCATTGACGTCCTTACAAATCTTCCGCTTCAAAATTTGAATATTGAGAATAACCGGTTTACTGGTTGGATTCCAGAGAAGTTGAAAAACATTAATTTGCAGTCGAATGGTAACTCTTGGAGTTCGGGACCTGCCCCCCCTCCTCCACCTGGTACACCGCCAGTGCCCAAAAACAACCAAAATCGCGGCTCCAATGGAAATAATAGCCCCTCGAGTGGAGGTGGAGGTGGTGGTAAGTCAGGAATAGGAGGTGGTGCCATAGCTGGAATAGTTATATCTATTCTTGTCGTTGGATCGGTTATTGCCTTTTTCCTTGTAAAGAAAAGATCTAGGAAGTCATCCTCGGACATAGAAAAGCTCGATGACCGGGCTTTCGCGCCTCTTGCTTCGAATGAAGTTCAAGAAATGAAGTCAATAGAAACTCCCACCAAATTCAACGCAAAGACATTTGATCCATCAATTGGATTAAATCTTAAACCCCCACCTGTTGACCATCACAAATCATTTGATGAGGATGATTTCGCAAAGAAAGCTCTAGTCAAGAAGAAGGCCAATACGCCTCCTTCAAATTTAAAATCATTTTCAATAGCTGATTTACAGATGGCTACCGGCAGTTTCAATGTCGAAAATTTTCTTGGCGAAGGGTCGTTCGGGCGTGTTTATCGAGCTCAGTTTGATGATGGAAAGGTCTTTGCTGTGAAAAATATAGATTCATCTGCAATATCCCGTGACTTTTTTGAAGATTTCACAGAAATCATATCGAATATCTCCCAATTGCATCACCCGAATGTTACCGAGCTGATGGGTTACTGCTGGGAGCATGGGCATCATCTCCTAGTTTATGAATTCCATAAAAATGGCTCCCTTCATGAATTCTTACATTTATCTGACGAATACACTAAGCCGCTGACATGGAACTCTCGTGTCAAAATTGCATTAGGAATCGCCCGAGCTTTAGAGTACTTGCATGAAGTTTGTTCACCATCAATTGTTCATAAAAATATAAAATCAGCAAATATATTACTGGACGTGGAGCTCAATCCTCACCTATCCGAATGTGGGCTGGCCAGTTTCATGCCGGATCAGGCATTAGATAACAATACAGGGTCTGGATACAGTGCCCCAGAGGTCACCATGTCTGGTCAATACACTCTGAAGAGCGACGTCTACAGTTTCGGAGTTGTCATGTTAGAGGTTCTTAGTGGCCGAAAACCATTTGACAGTACAAGACTGATGGCCGAGCAATCCCTGGTTCGGTGGGCTACTCCTCGGTTGCATGACATTGATGCTTTATCGAAAATGGTTGATCCAGGACTCGAAGGGCTCTACCCCGCAAAATCCCTTTCTCGATTTGCAGATGTGATAGCTCTTTGCGTACAGCCTGAGCCGGAGTTTAGACCCCCTATGTCTGAAGTGGTGCAAGCGCTGGTTGTACTCGTGCAAAGGGCTAACATGAGCAAGAGAACGGTGAGAAACAATGATGGATCCCCACCACGCTCTGATGCTCCCGATGCATTGTAA 2145 44.9 MVKRWSWSWSPLFLLINVCILEWRPSLVYGATDPGDAAALRVLYTSLNSPSQLTQWSANGDDPCGQSWKGVSCSGSRVTEIVLSGLGLSGSLGYQLTSLTSTTKLDVSNNNLAGEIAYQLPPNLLRLDLGRNNFNGGIPYSISQMTTLQYLNISHNQLQNQLIDMFDSLSSLVALDISYNSLPGALPRSFSSLSSMNTMYLQNNQFTGTIDVLTNLPLQNLNIENNRFTGWIPEKLKNINLQSNGNSWSSGPAPPPPPGTPPVPKNNQNRGSNGNNSPSSGGGGGGKSGIGGGAIAGIVISILVVGSVIAFFLVKKRSRKSSSDIEKLDDRAFAPLASNEVQEMKSIETPTKFNAKTFDPSIGLNLKPPPVDHHKSFDEDDFAKKALVKKKANTPPSNLKSFSIADLQMATGSFNVENFLGEGSFGRVYRAQFDDGKVFAVKNIDSSAISRDFFEDFTEIISNISQLHHPNVTELMGYCWEHGHHLLVYEFHKNGSLHEFLHLSDEYTKPLTWNSRVKIALGIARALEYLHEVCSPSIVHKNIKSANILLDVELNPHLSECGLASFMPDQALDNNTGSGYSAPEVTMSGQYTLKSDVYSFGVVMLEVLSGRKPFDSTRLMAEQSLVRWATPRLHDIDALSKMVDPGLEGLYPAKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKRTVRNNDGSPPRSDAPDAL 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 349895 355730 - Bpe023732.1 Bpe09g00053 108453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00053 714 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
Bpe09g00053 714 MobiDBLite consensus disorder prediction 243 285 - -
Bpe09g00053 714 Pfam Protein tyrosine and serine/threonine kinase 416 684 IPR001245 GO:0004672|GO:0006468
Bpe09g00053 714 Gene3D Transferase(Phosphotransferase) domain 1 493 704 - -
Bpe09g00053 714 MobiDBLite consensus disorder prediction 250 264 - -
Bpe09g00053 714 SUPERFAMILY Protein kinase-like (PK-like) 395 685 IPR011009 -
Bpe09g00053 714 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Bpe09g00053 714 ProSitePatterns Protein kinases ATP-binding region signature. 420 442 IPR017441 GO:0005524
Bpe09g00053 714 PANTHER OS01G0253100 PROTEIN 25 710 IPR045271 GO:0004714|GO:0006468
Bpe09g00053 714 MobiDBLite consensus disorder prediction 265 283 - -
Bpe09g00053 714 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 25 710 - -
Bpe09g00053 714 Gene3D Ribonuclease Inhibitor 33 257 IPR032675 -
Bpe09g00053 714 SUPERFAMILY L domain-like 33 243 - -
Bpe09g00053 714 ProSiteProfiles Protein kinase domain profile. 414 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00053 714 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00053 Bpe10g00721 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01463 Bpe-Chr4:21243681 Bpe09g00053 Bpe-Chr9:349895 5.84E-74 dispersed
Bpe09g00053 Bpe-Chr9:349895 Bpe14g00667 Bpe-Chr14:5332924 7.91E-159 dispersed
Bpe09g00053 Bpe-Chr9:349895 Bpe07g00562 Bpe-Chr7:12165674 5.66E-159 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63493 PF07714 PK_Tyr_Ser-Thr 9.80E-42 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00053 - - vvi:100249831 973.0