Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00056 ATGCTACTTGCTTCAAAGCTTCTCTCCCTGTTGCTCTACTCCTGCTTTTCGTTCTCCACTGTTTCTGCTCTGAGCTCCGATGGGGTTTCTCTGTTATCTCTTCAGAACCGCTGGACGTCTGACCCTCCCCTTTTAAACTCCGGCTGGAACGCCTCTGATTCCACTCCATGTTCATGGTCTGGAATTCAATGCGACGAACTCCACAATGTCATCTTCTTCAACCTTTCTGGTTATGGAATTTCCGGTCAGTTAGGACCCGAAATAGCCCTTTTAAGCCACTTGCAGACTATTATTTTGAGCTTTAACAAATTCTCCGGCGCAATCCCACCGGAATTTGGTAATTGTACTGAGCTACAATACTTAGATCTCTCCGGAAACGGGTTTTCTGGAGAAATACCCGATAGTTTCATTAATCTGCAGAGTCTGCAGATCTTGAACTTATATTCCAACTCGTTAAGCGGCGGAATTCCAGAATCACTGTTCCAAATCCAGTCGTTGCAGTATTTATATCTCAATAACAACAATTTTAGCGGCTCCATTCCGACAAATCTTGGAAATTTGGCGGACGTTGTTCATCTTTATCTGTATGCAAACGAGTTATCAGGAAAGATACCTTCATCCATCGGAAACTGCAGTAAGCTGGAACATCTTTTTCTGGACCAGAACCAGTTGGTCGGAGCTCTGCCGGACACTTTAAACAACCTGGACAATCTGGTTCGATTAGGAGTCAGCCACAACAATCTCGAGGGTGTCATCCCCTTGGGCAGGAGAAGCTGCAAGAACTTGGAAACCTTGGATCTGTCCTTCAATGGTTTCTCTGGACCTATACCTCCAGTACTGGGAAATTGCAGCAGCTTGAGAATCTTTATGTCCGTGAATGCCAATCTGACCGGCGGTATTCCTTCCTCCTTTGGCCAGCTAAGTAACCTTTCTTATTTAGATCTCTCTGAAAATTCTCTGTCTGGAAAAATACCACCTGAAATTGGTATGTGCAAGTCCTTAAAAACTTTACTATTGTATACGAACCAACTCGAGGGAGAAATTCCAGCCGAACTGGGTCTGCTAAGCGAATTACAAGATCTGGAACTGTTCGCCAACAATTTGACCGGCGAGATTCCAATTGGTATTTGGAAAATTCCGACGCTCGAGTATATACTTGTGTATGGCAATAACCTTTCAGGGGAATTGCCATTGGAGATATCTGAGCTTAGACAGCTCAAAAACATATCTTTGTTCAACAACCAGTTCTCTGGAGTTATACCTCAAAGTTTGGGGATTAACAGCAGCTTGGTGCTGGTGGACTTCACAAACAATAAGTTCACCGGAAATATCCCGCCGAATCTCTGCTCCGGGAAGCAATTGTTGTATTTGACGATGGGTTTGAATCAACTTCAGGGCAGTATACCTTCTGAGCTAGGAGCCTGTTCAACCCTCCAGAGGGTGATTCTGAAACACAATAATCTGACTGGAGTTCTTCCAGATTTTGTGAATTCCGCAGATCTTGTATATTTGGACGTCAGTGACAATGATTTAAGTGGATTTCTTCCCTCAAGCATTGGAAACTGCAGAAATCTCAGCTCCATTAATCTGTCATACAACAGGTTTGCAGGGCTTATACCAGAAGAGCTTGGAGCTCTTGATAATCTACTGTCCTTGAACTTTTCGCATAACTTTTTCGGGGGTCCCCTGCCTTCTTCGCTATCGAACTGTACCAAATTGAATAGATTTGACGTGGGTTTCAATCTATTGAATGGGTCGATCCCATCGAGTTTTAGGAGCTGGTCGCTTTTGTCGTCGTTAATTCTGAGAGAGAACGGATTTACCAGTGGAATCCCGTCTTTCTTGTTGGAGTTTGACGAGCTTTCGGAGCTAGAACTTGGAGGAAATTTGTTCGGAGGCGAGATTCCTTCTTGGCTAGGGGATCTGCCGAATCTGTTTTATGTCTTGAATCTCAGCAGTAATGGTTTGACTGGCGAAATACCGGCCGAGTTTAAGAATTTGATGAGGCTCCAGCTCTTGGATTTGTCGCATAACAATCTGACTGGAAATTTAGCAGTCCTCGGTGAAATGAGATCACTCGACAATGTCAATGTTTCGTACAATCTCTTCACTGGTCCACTCCCCGAAACACTGATCAACTTGCTGAATTCATCTCCTCGATCATTCGCCGGTAATCCCGGACTATGTCTCAATTGTGTTTCATCGGACGGCTTATCTTGTGTTGGAAACAGTAATTTGAAACCCTGCGATACTCAATCAAACTCTCGAATTGGCCTCAACAGAATCGAAATTGCAATGATAGCTCTTGGATCGTCTCTCTTCGTCTTTTTTCTTCTATCTGCCATCCTCTTTCTCTTCTTCCGCAGAAGATGGAAGAAAAAGTTAGTAAATTCTGCCAAAGCGGGACCCAGTTCCCTCCTCAACCAAGTGATGGAGGCAACCGGAAACTTTAATGACGGCTACATAATCGGAAGAGGAGCTCACGGAGTCGTGTACAAGGCCTCGCTCGGTCCGGACAGAGTATTTGCGGTGAAGAAGCTCATGTTCGAAGGGCATAAAGGCAGAAACTTGAGTATGATGAGAGAAATTCAAACAGTTGGCAACATTAGGCATCGAAATCTGATCAAATTCGAAGACTATTGGATCAGTGACGACTACGGCCTGATCTTGTACAGATACATGTCAAACGGGAGTCTCCACGACGTACTCCATGGAACAAATCCGCCTCGAGCTCTCGAGTGGGGAATTCGATATAAGATAGCAGTAGGAACTGCTCACGGATTGGCGTATCTCCATTACGACTGTAATCCTGCTATAGTGCACCGAGACATCAAACCACAAAATATACTCTTAGATTCTAATATGGAGCCTCACATCAGCGATTTTGGCATCGCAAAGCTGATGGACCAATCGTCTTTGGCTTCATTGACATCTACTGCAATAGCAGGAACCATCGGATACATAGCACCAGAAAATGCTTTCGCAACTACAAAAAGTGCAGCCTCTGATGTGTATAGCTACGGAGTGGTTTTGCTCGAGCTGATAACAAGAAAGCAACCGCAGGAGACCGATATCGTGTCTTTTGTCAGCTCGGCGTGGAGGGATTCGCAAGATATTGACCGAATAGTGGATTCAGGATTGAAGGAGGAAGTTTTAGATTCAGATGCGAGGAATCAAGTTGTTAATGTGCTTCTGGTAGCACTGAGATGTACAGAAAATGACCCGAAAAACAGACCAACGGCTAGAGATGCAGTCAAGCAGTTGTTACATGCAAATGCCAAGCCTTGA 3288 44.53 MLLASKLLSLLLYSCFSFSTVSALSSDGVSLLSLQNRWTSDPPLLNSGWNASDSTPCSWSGIQCDELHNVIFFNLSGYGISGQLGPEIALLSHLQTIILSFNKFSGAIPPEFGNCTELQYLDLSGNGFSGEIPDSFINLQSLQILNLYSNSLSGGIPESLFQIQSLQYLYLNNNNFSGSIPTNLGNLADVVHLYLYANELSGKIPSSIGNCSKLEHLFLDQNQLVGALPDTLNNLDNLVRLGVSHNNLEGVIPLGRRSCKNLETLDLSFNGFSGPIPPVLGNCSSLRIFMSVNANLTGGIPSSFGQLSNLSYLDLSENSLSGKIPPEIGMCKSLKTLLLYTNQLEGEIPAELGLLSELQDLELFANNLTGEIPIGIWKIPTLEYILVYGNNLSGELPLEISELRQLKNISLFNNQFSGVIPQSLGINSSLVLVDFTNNKFTGNIPPNLCSGKQLLYLTMGLNQLQGSIPSELGACSTLQRVILKHNNLTGVLPDFVNSADLVYLDVSDNDLSGFLPSSIGNCRNLSSINLSYNRFAGLIPEELGALDNLLSLNFSHNFFGGPLPSSLSNCTKLNRFDVGFNLLNGSIPSSFRSWSLLSSLILRENGFTSGIPSFLLEFDELSELELGGNLFGGEIPSWLGDLPNLFYVLNLSSNGLTGEIPAEFKNLMRLQLLDLSHNNLTGNLAVLGEMRSLDNVNVSYNLFTGPLPETLINLLNSSPRSFAGNPGLCLNCVSSDGLSCVGNSNLKPCDTQSNSRIGLNRIEIAMIALGSSLFVFFLLSAILFLFFRRRWKKKLVNSAKAGPSSLLNQVMEATGNFNDGYIIGRGAHGVVYKASLGPDRVFAVKKLMFEGHKGRNLSMMREIQTVGNIRHRNLIKFEDYWISDDYGLILYRYMSNGSLHDVLHGTNPPRALEWGIRYKIAVGTAHGLAYLHYDCNPAIVHRDIKPQNILLDSNMEPHISDFGIAKLMDQSSLASLTSTAIAGTIGYIAPENAFATTKSAASDVYSYGVVLLELITRKQPQETDIVSFVSSAWRDSQDIDRIVDSGLKEEVLDSDARNQVVNVLLVALRCTENDPKNRPTARDAVKQLLHANAKP 1095
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 386261 389773 + Bpe023735.1 Bpe09g00056 108456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00056 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 939 951 IPR008271 GO:0004672|GO:0006468
Bpe09g00056 1095 SMART serkin_6 817 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00056 1095 Pfam Protein kinase domain 819 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00056 1095 ProSiteProfiles Protein kinase domain profile. 817 1093 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00056 1095 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Bpe09g00056 1095 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 687 1093 - -
Bpe09g00056 1095 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 642 685 - -
Bpe09g00056 1095 SUPERFAMILY Protein kinase-like (PK-like) 805 1088 IPR011009 -
Bpe09g00056 1095 Gene3D Ribonuclease Inhibitor 498 753 IPR032675 -
Bpe09g00056 1095 Gene3D Ribonuclease Inhibitor 354 426 IPR032675 -
Bpe09g00056 1095 Gene3D Ribonuclease Inhibitor 427 497 IPR032675 -
Bpe09g00056 1095 Gene3D Transferase(Phosphotransferase) domain 1 894 1094 - -
Bpe09g00056 1095 Pfam Leucine Rich Repeat 261 283 IPR001611 GO:0005515
Bpe09g00056 1095 SMART LRR_typ_2 139 163 IPR003591 -
Bpe09g00056 1095 SMART LRR_typ_2 307 331 IPR003591 -
Bpe09g00056 1095 SMART LRR_typ_2 642 666 IPR003591 -
Bpe09g00056 1095 SMART LRR_typ_2 164 187 IPR003591 -
Bpe09g00056 1095 SMART LRR_typ_2 667 690 IPR003591 -
Bpe09g00056 1095 SMART LRR_typ_2 91 115 IPR003591 -
Bpe09g00056 1095 SMART LRR_typ_2 211 234 IPR003591 -
Bpe09g00056 1095 SUPERFAMILY L domain-like 236 406 - -
Bpe09g00056 1095 PRINTS Leucine-rich repeat signature 310 323 - -
Bpe09g00056 1095 PRINTS Leucine-rich repeat signature 667 680 - -
Bpe09g00056 1095 Gene3D Ribonuclease Inhibitor 189 352 IPR032675 -
Bpe09g00056 1095 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 291 643 - -
Bpe09g00056 1095 Gene3D Phosphorylase Kinase; domain 1 792 893 - -
Bpe09g00056 1095 PANTHER OS08G0446200 PROTEIN 8 254 - -
Bpe09g00056 1095 PANTHER OS08G0446200 PROTEIN 291 643 - -
Bpe09g00056 1095 ProSitePatterns Protein kinases ATP-binding region signature. 823 846 IPR017441 GO:0005524
Bpe09g00056 1095 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 254 - -
Bpe09g00056 1095 PANTHER OS08G0446200 PROTEIN 687 1093 - -
Bpe09g00056 1095 PANTHER OS08G0446200 PROTEIN 642 685 - -
Bpe09g00056 1095 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Bpe09g00056 1095 SUPERFAMILY RNI-like 409 715 - -
Bpe09g00056 1095 SUPERFAMILY L domain-like 27 289 - -
Bpe09g00056 1095 Pfam Leucine rich repeat 133 176 IPR001611 GO:0005515
Bpe09g00056 1095 Pfam Leucine rich repeat 477 535 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00056 Bpe-Chr9:386261 Bpe13g00534 Bpe-Chr13:12615834 0 dispersed
Bpe09g00056 Bpe-Chr9:386261 Bpe04g01056 Bpe-Chr4:7837449 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63494 PF00069 Pkinase 3.00E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00056 - - qsu:112010432 1391.71