Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00065 ATGCTGATGGGGGTGCGCGTGATAGGACTTATGCGCACAAAACCTACACCATCAAAGCTCTGGCAATTGCCAATTGTCGTTCTGTTGATATCATGCTTGATTGGGTCGCGGTTGGCTCATCCAGACGGTGACACCCTCCTAAATTTCAAGAGCTTTTTGACCTCTGCCGAAGCTCTAAACAATTGGAATTCCTCCACAATCCCCTGCAATGGAAACAGGCCGAATTGGGTGGGCGTGCTTTGTGATCTAAATGGGAACATTCGAGGGCTCCGGCTAGAAAATATGGGACTCAAAGGTGGGGTTGATCTTGATTCGCTTGTGTCTTTAACCCACATTCGCACCCTTAGCTTTATGAACAATACCTTGGTTGGTCCTTTTCCGAATCTTGAAAATTTCAGAAGATTAAGGTCGTTGTATCTCTCGTATAATCATTTTTCTGGAGAAATCCAGGACGATGCTTTCGAGGGCATGAAATTCCTGAAGAAAGTTCTTTTGGCAAATAACGAGTTCACAGGACCCATTCCTTCATCTCTCTCGTCGCTCCCTCAGCTTACGATTTTGAGGCTTGACGAAAACAAATTCACTGGCCAAATCCCTGATTTTCAACAGGGAACCTTGAAGAGGTTCAATGTTTCAGATAATGAATTGGAGGGTCCTATTCCTCCAAGCCTGAGGTCAATGGATCCAACCTCCTTTGCAGGTAATGAGAACCTATGCGGGTTGCCTCTCAAGAAAATATGCAACTCCCCTCTGAAAACAGAAACAAAAGCAACTCCTTTGCTGAGAATTGCCATAGCCATCATGGTTGTGGGGCTGATACTAGCACTTATAACAGTAATTTTCATAATTTATTACTTCATAGAAAGAAGAAAACAGTCAGAACAAGGCTATGCAACAGGCACAAGAGCATCGAATGCCCACAACGGGTTTGTAGGCTCCCATGAAAACCAAATAGAACAAGCAGCGCAATTAAAGAAGCCGGAGCATGGAAAGCTTACCTTCGTAATGGAAGAGAGAGAGAGCTTTGATCTGCACGATCTTCTTCGGGCTTCCGCGGAAGTTTTGGGGAGTGGAACATTTGGATCGTCTTACAAAGCCACCATACTGTGCGATGCTGTGGTGGTGAAGAGGTATAAACAGATACTGAACACCGTGGGAAGAGAGGAGTTTCATGAGCACATGAGGAGGCTTGGCAGATTGAGGCATCCAAACTTGCTTCCCATCGTTGCTTACTATTACCGGAAAGAAGAGAAGCTGTTGATTTCCGACTTCGTGGAGAACGGTAGTTTGGCCAGTCACCTTCACGGAAATCACAACGTGGAGCAACCAGGCCTGGATTGGGCGACCCGGCTGAGAATAATCAAAGGCATAGCCAGGGGATTATCGTATCTTTACAGCAGCGCACCGCAAAGCATCGCTGTAGCACACGGCCACCTGAAATCATCCAATGTCCTGCTAGACGACGCGATGGAACCACTACTGACAGACTACGGCCTCCTCCCGATCATCAACCAGGATCAAGCCCATAACCTGATGATGGCCTACAAATCGCCGGAATTCGCCGAGCACGGCCGCATAACCAGAAAAACAGACGTCTGGTGCTTGGGAATAGTGATATTGGAGGTATTAACGGGGAAATTTCCGGAGAACTATTTGACGGAGAGGCACGAGAGTGGTGCGGACATAGGGGAATGGGTAAATGCCATGATCAAGGAGAAGCGTACGAGCCAGGTGTTGGATTCAGAGATGAGAGGGGTGAGCCGAGGTGAGATGCTGAAGCTGCTGAAGATTGGGTTGGGTTGCTGCGAGGAAGACGAGGAGAGGAGAATGGATTTGAACGAGGCCGCCATGAAAATCCAGGAGCTCGAGGAGGGAGAGACGTGGGACTGCAGCCCAAGCGACGACTAA 1908 47.96 MLMGVRVIGLMRTKPTPSKLWQLPIVVLLISCLIGSRLAHPDGDTLLNFKSFLTSAEALNNWNSSTIPCNGNRPNWVGVLCDLNGNIRGLRLENMGLKGGVDLDSLVSLTHIRTLSFMNNTLVGPFPNLENFRRLRSLYLSYNHFSGEIQDDAFEGMKFLKKVLLANNEFTGPIPSSLSSLPQLTILRLDENKFTGQIPDFQQGTLKRFNVSDNELEGPIPPSLRSMDPTSFAGNENLCGLPLKKICNSPLKTETKATPLLRIAIAIMVVGLILALITVIFIIYYFIERRKQSEQGYATGTRASNAHNGFVGSHENQIEQAAQLKKPEHGKLTFVMEERESFDLHDLLRASAEVLGSGTFGSSYKATILCDAVVVKRYKQILNTVGREEFHEHMRRLGRLRHPNLLPIVAYYYRKEEKLLISDFVENGSLASHLHGNHNVEQPGLDWATRLRIIKGIARGLSYLYSSAPQSIAVAHGHLKSSNVLLDDAMEPLLTDYGLLPIINQDQAHNLMMAYKSPEFAEHGRITRKTDVWCLGIVILEVLTGKFPENYLTERHESGADIGEWVNAMIKEKRTSQVLDSEMRGVSRGEMLKLLKIGLGCCEEDEERRMDLNEAAMKIQELEEGETWDCSPSDD 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 451682 453998 - Bpe023744.1 Bpe09g00065 108465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00065 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 628 - -
Bpe09g00065 635 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 15 628 - -
Bpe09g00065 635 SUPERFAMILY L domain-like 66 243 - -
Bpe09g00065 635 Pfam Protein tyrosine and serine/threonine kinase 353 614 IPR001245 GO:0004672|GO:0006468
Bpe09g00065 635 Coils Coil 602 622 - -
Bpe09g00065 635 SUPERFAMILY Protein kinase-like (PK-like) 353 618 IPR011009 -
Bpe09g00065 635 Pfam Leucine rich repeat N-terminal domain 40 82 IPR013210 -
Bpe09g00065 635 Gene3D Transferase(Phosphotransferase) domain 1 425 631 - -
Bpe09g00065 635 Gene3D Ribonuclease Inhibitor 156 248 IPR032675 -
Bpe09g00065 635 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Bpe09g00065 635 Gene3D Phosphorylase Kinase; domain 1 314 424 - -
Bpe09g00065 635 ProSiteProfiles Protein kinase domain profile. 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00065 635 Pfam Leucine rich repeat 133 194 IPR001611 GO:0005515
Bpe09g00065 635 Gene3D Ribonuclease Inhibitor 42 155 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00065 Bpe-Chr9:451682 Bpe03g00008 Bpe-Chr3:80431 9.08E-96 dispersed
Bpe02g02172 Bpe-Chr2:22992648 Bpe09g00065 Bpe-Chr9:451682 1.10E-142 transposed
Bpe06g00202 Bpe-Chr6:7514038 Bpe09g00065 Bpe-Chr9:451682 1.07E-79 transposed
Bpe08g00723 Bpe-Chr8:8690576 Bpe09g00065 Bpe-Chr9:451682 0 transposed
Bpe13g00381 Bpe-Chr13:11574495 Bpe09g00065 Bpe-Chr9:451682 2.00E-102 transposed
Bpe13g01075 Bpe-Chr13:16329234 Bpe09g00065 Bpe-Chr9:451682 1.58E-114 transposed
Bpe14g00073 Bpe-Chr14:1165811 Bpe09g00065 Bpe-Chr9:451682 1.76E-110 transposed
Bpe14g00541 Bpe-Chr14:4701524 Bpe09g00065 Bpe-Chr9:451682 0 transposed
Bpe08g01513 Bpe-Chr8:15802651 Bpe09g00065 Bpe-Chr9:451682 1.61E-98 transposed
Bpe03g00708 Bpe-Chr3:27231889 Bpe09g00065 Bpe-Chr9:451682 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63495 PF07714 PK_Tyr_Ser-Thr 6.70E-29 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00065 - - cmo:103487533 737.258