Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00075 ATGAACTTTATTATGAGCAAAAATGTGGCTTTTCTTGTTCCCATTTTTGCAGTTCTTGCATCGACGATTATCTTCGATCCGAACTCGAGATTTATTGAACATTTGATCGATCCTAGCATCCAAAACTCAGCTCTTCCTGTTTCTTTTTGGACCCTTTCTTCCTATGCAAGGTCTCACCATCACCATCATAAGAAACACGAGGAGATCGTCTCCGTTTGCGATGATTTTCCGCCCAATTTCCCGCCTCTGGACACCAACACGACTTCTTTCTTCTGCGTTGATCGGAACGGGTGTTGTAACTTCACGACTGTTCAAGCCGCCGTCGATGCAGTTCCGGTTTTAAGCCTCAAACGGAACATAATTTGGATCAACTTCGGGATTTACCATGAGAAAGTGATCATTCCAAGATCCAAACCAAACATTACATTTCAAGGCCAAGGCTTCACGTCAACCGGAATTTCTTGGAACGACACGGCCAATTCTTCACACGGCACGTTTTACAGTGGTTCTGTTCAAGTTTTTTCTGCCAACTTCATTGCTAAAAACATCAGCTTCATGAATGTGGCTCCCATTCCGAACCCAGGCGACGTCGGAGCTCAAGCAGTGGCCATTAGAATCGCCGGAGACCAATCGGCGTTCTGGGGGTGCGGCTTTTTCGGCGCGCAGGATACCCTTCACGATGATAGAGGTCGCCATTACTTCAAGGAATGCTATATTCAGGGTTCCATCGATTTCATCTTCGGCAATGCAAAATCATTCTATGAGAACTGCCAGTTGATATCAATGGCAAACCCAGTAAGTCCGGGGCAAAGGGTGATAAACGGCGCCGTGACGGCGAACGGAAGGGCGTCGAAGGACGAGAACTCGGGCTTTGCTTTCGTCAACTGCAGCGTCGGAGGCAGCGGAAGGGTATGGCTGGGGAGGGCGTGGAGGCCATTTTCGCGCGTCGTCTTCGCCCTCTGCACCATGTCTGAAATCATAGCTCCGGAGGGTTGGAATGACTTCAACGACCCTACCAGAGACTCGTCGATCTTCTATGGAGAATATAACTGCACAGGCCCAGGCTCAAACGTGACACTGAGGGCTCCTTACGTTCAAAGACTAAATGAAACACAAGTCTCTCCATTCCTCAACCTCTCCTTCGTCGATGCTGACCAATGGTTGCAACCCTACTACTCGGATTAA 1185 48.61 MNFIMSKNVAFLVPIFAVLASTIIFDPNSRFIEHLIDPSIQNSALPVSFWTLSSYARSHHHHHKKHEEIVSVCDDFPPNFPPLDTNTTSFFCVDRNGCCNFTTVQAAVDAVPVLSLKRNIIWINFGIYHEKVIIPRSKPNITFQGQGFTSTGISWNDTANSSHGTFYSGSVQVFSANFIAKNISFMNVAPIPNPGDVGAQAVAIRIAGDQSAFWGCGFFGAQDTLHDDRGRHYFKECYIQGSIDFIFGNAKSFYENCQLISMANPVSPGQRVINGAVTANGRASKDENSGFAFVNCSVGGSGRVWLGRAWRPFSRVVFALCTMSEIIAPEGWNDFNDPTRDSSIFYGEYNCTGPGSNVTLRAPYVQRLNETQVSPFLNLSFVDADQWLQPYYSD 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 528645 530612 - Bpe023754.1 Bpe09g00075 108475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00075 394 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Bpe09g00075 394 Pfam Pectinesterase 93 384 IPR000070 GO:0030599|GO:0042545
Bpe09g00075 394 Gene3D - 85 393 IPR012334 -
Bpe09g00075 394 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 391 - -
Bpe09g00075 394 SUPERFAMILY Pectin lyase-like 91 392 IPR011050 -
Bpe09g00075 394 PANTHER PECTINESTERASE 8-RELATED 11 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00302 Bpe-Chr8:1813253 Bpe09g00075 Bpe-Chr9:528645 6.86E-75 dispersed
Bpe08g01099 Bpe-Chr8:13037297 Bpe09g00075 Bpe-Chr9:528645 5.80E-87 dispersed
Bpe09g00075 Bpe-Chr9:528645 Bpe11g00578 Bpe-Chr11:4417256 8.81E-86 dispersed
Bpe09g00075 Bpe-Chr9:528645 Bpe04g01561 Bpe-Chr4:21946348 3.27E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00075 - - sind:105158170 598.201